RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 TMEM242Q9NWH2 141 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 COPZ2Q9P299 210 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 NWD2Q9ULI1 1742 aa0.2□□□□□ -2.38
SMAD4-207ENST00000589076 DIP2BQ9P265 1576 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 CPS1P31327 1500 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 M0R129 80 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 V9GYV3 84 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 TSC2P49815 1807 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 DAPK1P53355 1430 aa0.19□□□□□ -2.38
SMAD4-207ENST00000589076 PAPPAQ13219 1627 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 TRBV7-1A0A0A6YYK4 115 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 PIRTP0C851 137 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 SMIM21Q3B7S5 101 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 Q6ZUT4 128 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 MAFIPQ8WZ33 124 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 PSMG3Q9BT73 122 aaPredicted RBP0.18□□□□□ -2.38
SMAD4-207ENST00000589076 EEA1Q15075 1411 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 MYOM3Q5VTT5 1437 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 PEG3Q9GZU2 1588 aa0.18□□□□□ -2.38
SMAD4-207ENST00000589076 NRXN1Q9ULB1 1477 aa0.17□□□□□ -2.38
SMAD4-207ENST00000589076 K7ERU9 68 aa0.17□□□□□ -2.38
SMAD4-207ENST00000589076 COX6A2Q02221 97 aa0.17□□□□□ -2.38
SMAD4-207ENST00000589076 SCIMPQ6UWF3 145 aa0.17□□□□□ -2.38
SMAD4-207ENST00000589076 ANP32BQ92688 251 aaKnown RBP0.17□□□□□ -2.38
SMAD4-207ENST00000589076 Q96NJ1 140 aa0.17□□□□□ -2.38
SMAD4-207ENST00000589076 FLGP20930 4061 aaPredicted RBP0.16□□□□□ -2.38
SMAD4-207ENST00000589076 PITX3O75364 302 aa0.16□□□□□ -2.38
SMAD4-207ENST00000589076 ACYP2P14621 99 aa0.16□□□□□ -2.38
SMAD4-207ENST00000589076 RRAS2P62070 204 aaPredicted RBP0.16□□□□□ -2.38
SMAD4-207ENST00000589076 C9orf116Q5BN46 136 aaPredicted RBP0.16□□□□□ -2.38
SMAD4-207ENST00000589076 RPL7L1Q6DKI1 246 aaKnown RBP0.16□□□□□ -2.38
SMAD4-207ENST00000589076 TSTD1Q8NFU3 115 aa0.16□□□□□ -2.38
SMAD4-207ENST00000589076 RPRMQ9NS64 109 aa0.16□□□□□ -2.38
SMAD4-207ENST00000589076 SCP2D1Q9UJQ7 156 aa0.16□□□□□ -2.38
SMAD4-207ENST00000589076 LOC105371267A0A1B0GV96 52 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 NPFFO15130 113 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 SPINK1P00995 79 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 IFNA17P01571 189 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 NMBP08949 121 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 PIPP12273 146 aaPredicted RBP0.15□□□□□ -2.39
SMAD4-207ENST00000589076 Q5BKY6 102 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 IFT172Q9UG01 1749 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 WDR7Q9Y4E6 1490 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 UGGT1Q9NYU2 1555 aa0.15□□□□□ -2.39
SMAD4-207ENST00000589076 MARF1Q9Y4F3 1742 aaKnown RBP0.14□□□□□ -2.39
SMAD4-207ENST00000589076 A6NIN4 97 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 TMEM14DPA8MWL7 114 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 IL5P05113 134 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 GUCA1AP43080 201 aaPredicted RBP0.14□□□□□ -2.39
SMAD4-207ENST00000589076 SMCO1Q147U7 214 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 C10orf82Q8WW14 230 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 MYH7P12883 1935 aa0.14□□□□□ -2.39
SMAD4-207ENST00000589076 UBE2D1P51668 147 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 EDDM3BP56851 147 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 RPS25P62851 125 aaKnown RBP0.13□□□□□ -2.39
SMAD4-207ENST00000589076 TCEAL4Q96EI5 215 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 TPT1P8Q9HAU6 139 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 ADGRL2O95490 1459 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 ZNF831Q5JPB2 1677 aa0.13□□□□□ -2.39
SMAD4-207ENST00000589076 IBTKQ9P2D0 1353 aaPredicted RBP0.12□□□□□ -2.39
SMAD4-207ENST00000589076 COPZ1P61923 177 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 UBE2G1P62253 170 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 INSL4Q14641 139 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 Q6ZRX8 168 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 SPTSSAQ969W0 71 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 PFDN5Q99471 154 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 TMEM191AQ9H0A3 160 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 DOCK2Q92608 1830 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 PRDM2Q13029 1718 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 SPHKAPQ2M3C7 1700 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 ZNF609O15014 1411 aa0.12□□□□□ -2.39
SMAD4-207ENST00000589076 DNAH17Q9UFH2 4485 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 GRIN2AQ12879 1464 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 PATJQ8NI35 1801 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 TRGV1A0A0A0MS02 117 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 NDUFB6O95139 128 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 GCHFRP30047 84 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 KRTAP20-2Q3LI61 65 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 FAM213BQ8TBF2 198 aa0.11□□□□□ -2.39
SMAD4-207ENST00000589076 PAIP2BQ9ULR5 123 aaKnown RBP0.11□□□□□ -2.39
SMAD4-207ENST00000589076 RNF17Q9BXT8 1623 aaKnown RBP0.11□□□□□ -2.39
SMAD4-207ENST00000589076 TNRC6CQ9HCJ0 1690 aaKnown RBP0.11□□□□□ -2.39
SMAD4-207ENST00000589076 LRRC37A2A6NM11 1700 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 USP32Q8NFA0 1604 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 APOC4-APOC2K7ER74 178 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 CBLN1P23435 193 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 ZNF818PQ6ZRF7 136 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 KCNRGQ8N5I3 272 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 CROCC2H7BZ55 1655 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 NUP188Q5SRE5 1749 aa0.1□□□□□ -2.39
SMAD4-207ENST00000589076 WNK3Q9BYP7 1800 aa0.09□□□□□ -2.39
SMAD4-207ENST00000589076 TRBV10-3A0A0K0K1G6 114 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 CLPSL1A2RUU4 121 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 SNCGO76070 127 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 WFDC6Q9BQY6 131 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 RGPD1P0DJD0 1748 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 AKAP6Q13023 2319 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 ZNF518AQ6AHZ1 1483 aa0.09□□□□□ -2.4
SMAD4-207ENST00000589076 PXDNQ92626 1479 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms