RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 IGLC6P0CF74 106 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 S100A5P33763 92 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 PKD1L2Q7Z442 2459 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 SPTSSBQ8NFR3 76 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 DEFB105AQ8NG35 78 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 TMEM263Q8WUH6 116 aaKnown RBP-0.51□□□□□ -2.49
SKA2-210ENST00000584089 AIF1LQ9BQI0 150 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 ANKRD30AQ9BXX3 1397 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 SEC11CQ9BY50 192 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 NDUFA4L2Q9NRX3 87 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 FMN2Q9NZ56 1722 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 CCDC167Q9P0B6 97 aa-0.51□□□□□ -2.49
SKA2-210ENST00000584089 PHLPP1O60346 1717 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 TET3O43151 1660 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 EHBP1L1Q8N3D4 1523 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 TRBV7-3A0A075B6L6 115 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 HCG22E2RYF7 251 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 SYS1-DBNDD2H3BUS1 97 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 MGPP08493 103 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 WHAMMP3Q1A5X7 153 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 C10orf128Q5T292 105 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 KCNRGQ8N5I3 272 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 Q8N8P6 123 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 MGST2Q99735 147 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 SELENOSQ9BQE4 189 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 DYNLRB1Q9NP97 96 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 LINC01558Q9Y6Z2 57 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 PDE4DIPQ5VU43 2346 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 HTTP42858 3142 aa-0.52□□□□□ -2.49
SKA2-210ENST00000584089 ANKRD11Q6UB99 2663 aaPredicted RBP-0.52□□□□□ -2.49
SKA2-210ENST00000584089 EDC4Q6P2E9 1401 aaKnown RBP-0.53□□□□□ -2.49
SKA2-210ENST00000584089 NBPF19A0A087WUL8 3843 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 SSSCA1O60232 199 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 MT1AP04731 61 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 NEFHP12036 1026 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 SMCO1Q147U7 214 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 C9orf62Q8N4C0 152 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 TTC9CQ8N5M4 171 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 FAM167A-AS1Q96KT0 104 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 SPRR4Q96PI1 79 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 FXYD6Q9H0Q3 95 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 PAIP2BQ9ULR5 123 aaKnown RBP-0.53□□□□□ -2.49
SKA2-210ENST00000584089 ZZEF1O43149 2961 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 DNAH3Q8TD57 4116 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 SCN7AQ01118 1682 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 ZFHX3Q15911 3703 aa-0.53□□□□□ -2.49
SKA2-210ENST00000584089 MTORP42345 2549 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 NKTRP30414 1462 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 CPSF1Q10570 1443 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 PDCD11Q14690 1871 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 TEX15Q9BXT5 2789 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 RGPD2P0DJD1 1756 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 COL14A1Q05707 1796 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 LINC00959A0A1B0GUT2 108 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 IGLC7A0M8Q6 106 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 M0R2Z0 102 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 HMGN4O00479 90 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 SFT2D2O95562 160 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 LINC00694P0DN24 101 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 BTG2P78543 158 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 DEFB112Q30KQ8 113 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 PYDC1Q8WXC3 89 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 SNRNP25Q9BV90 132 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 RERGLQ9H628 205 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 NAA60Q9H7X0 242 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 MGAM2Q2M2H8 2515 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 LRRK2Q5S007 2527 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 EPPK1P58107 5090 aaKnown RBP-0.54□□□□□ -2.5
SKA2-210ENST00000584089 ANKRD36A6QL64 1941 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 HMGXB3Q12766 1538 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 C1orf167Q5SNV9 1468 aa-0.54□□□□□ -2.5
SKA2-210ENST00000584089 AKAP13Q12802 2813 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 MUC17Q685J3 4493 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 SHPRHQ149N8 1683 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 TRANK1O15050 2925 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 USP9XQ93008 2570 aaPredicted RBP-0.55□□□□□ -2.5
SKA2-210ENST00000584089 M0R129 80 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 ARPC5O15511 151 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 HIST1H1DP16402 221 aaKnown RBP-0.55□□□□□ -2.5
SKA2-210ENST00000584089 RPS25P62851 125 aaKnown RBP-0.55□□□□□ -2.5
SKA2-210ENST00000584089 S100A7L2Q5SY68 101 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 C10orf113Q5VZT2 155 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 ARL11Q969Q4 196 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 PPP3R2Q96LZ3 170 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 SMIM3Q9BZL3 60 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 PRO1933Q9H354 126 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 FAIMQ9NVQ4 179 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 COPZ2Q9P299 210 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 SERP1Q9Y6X1 66 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 STARD9Q9P2P6 4700 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 REV3LO60673 3130 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 LAMA1P25391 3075 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 MAPKBP1O60336 1514 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 SLIT1O75093 1534 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 NAIPQ13075 1403 aa-0.55□□□□□ -2.5
SKA2-210ENST00000584089 FOCADQ5VW36 1801 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 K7ERU9 68 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 CCL22O00626 93 aa-0.56□□□□□ -2.5
SKA2-210ENST00000584089 SAA2P0DJI9 122 aaPredicted RBP-0.56□□□□□ -2.5
SKA2-210ENST00000584089 CKS1BP61024 79 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms