RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 NBEAL2Q6ZNJ1 2754 aa15.86■□□□□ 0.13
CCDC47-204ENST00000582252 K7EP34 96 aa15.86■□□□□ 0.13
CCDC47-204ENST00000582252 SPART-AS1P0CW21 52 aa15.86■□□□□ 0.13
CCDC47-204ENST00000582252 C10orf126Q8N4M7 172 aa15.86■□□□□ 0.13
CCDC47-204ENST00000582252 NAA38Q9BRA0 125 aaKnown RBP15.86■□□□□ 0.13
CCDC47-204ENST00000582252 TEX48A0A1B0GUV7 120 aa15.85■□□□□ 0.13
CCDC47-204ENST00000582252 IGLL5B9A064 214 aa15.85■□□□□ 0.13
CCDC47-204ENST00000582252 ATP5G1P05496 136 aa15.85■□□□□ 0.13
CCDC47-204ENST00000582252 COX6A2Q02221 97 aa15.85■□□□□ 0.13
CCDC47-204ENST00000582252 DEFB4AO15263 64 aa15.84■□□□□ 0.13
CCDC47-204ENST00000582252 SPCS1Q9Y6A9 102 aa15.84■□□□□ 0.13
CCDC47-204ENST00000582252 RPL24P83731 157 aaKnown RBP15.83■□□□□ 0.13
CCDC47-204ENST00000582252 IGLV5-39A0A0G2JS06 123 aa15.82■□□□□ 0.12
CCDC47-204ENST00000582252 NDUFA1O15239 70 aa15.81■□□□□ 0.12
CCDC47-204ENST00000582252 TIMM17BO60830 172 aa15.8■□□□□ 0.12
CCDC47-204ENST00000582252 SPANXDQ9BXN6 97 aa15.8■□□□□ 0.12
CCDC47-204ENST00000582252 SPANXCQ9NY87 97 aa15.8■□□□□ 0.12
CCDC47-204ENST00000582252 SMIM1B2RUZ4 78 aa15.79■□□□□ 0.12
CCDC47-204ENST00000582252 CELA1Q9UNI1 258 aa15.79■□□□□ 0.12
CCDC47-204ENST00000582252 TRAV26-1A0A087WT03 109 aa15.78■□□□□ 0.12
CCDC47-204ENST00000582252 APOMO95445 188 aa15.78■□□□□ 0.12
CCDC47-204ENST00000582252 IGLV4-60A0A075B6I1 120 aa15.77■□□□□ 0.12
CCDC47-204ENST00000582252 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.77■□□□□ 0.12
CCDC47-204ENST00000582252 A0A1B0GUV1 79 aa15.77■□□□□ 0.12
CCDC47-204ENST00000582252 CIRBPQ14011 172 aaKnown RBP15.77■□□□□ 0.12
CCDC47-204ENST00000582252 PGPEP1Q9NXJ5 209 aa15.77■□□□□ 0.12
CCDC47-204ENST00000582252 SH2D6Q7Z4S9 175 aa15.77■□□□□ 0.11
CCDC47-204ENST00000582252 TMEM262E9PQX1 116 aa15.76■□□□□ 0.11
CCDC47-204ENST00000582252 F5H768 121 aa15.76■□□□□ 0.11
CCDC47-204ENST00000582252 PRB2P02812 416 aaPredicted RBP15.76■□□□□ 0.11
CCDC47-204ENST00000582252 MUSTN1Q8IVN3 82 aa15.76■□□□□ 0.11
CCDC47-204ENST00000582252 LITAFQ99732 161 aa15.76■□□□□ 0.11
CCDC47-204ENST00000582252 K7EIL1 84 aa15.75■□□□□ 0.11
CCDC47-204ENST00000582252 CFC1BP0CG36 223 aa15.74■□□□□ 0.11
CCDC47-204ENST00000582252 CFC1P0CG37 223 aa15.74■□□□□ 0.11
CCDC47-204ENST00000582252 MIAQ16674 131 aa15.74■□□□□ 0.11
CCDC47-204ENST00000582252 LYRM7Q5U5X0 104 aa15.74■□□□□ 0.11
CCDC47-204ENST00000582252 A4D1N5 150 aa15.74■□□□□ 0.11
CCDC47-204ENST00000582252 MRPL23Q16540 153 aaKnown RBP15.74■□□□□ 0.11
CCDC47-204ENST00000582252 A0A0B4J2C4 111 aa15.73■□□□□ 0.11
CCDC47-204ENST00000582252 IFITM1P13164 125 aa15.73■□□□□ 0.11
CCDC47-204ENST00000582252 HERV-K104P63124 156 aa15.73■□□□□ 0.11
CCDC47-204ENST00000582252 A0A096LPF7 62 aa15.72■□□□□ 0.11
CCDC47-204ENST00000582252 IGKV3OR2-268A0A0C4DH90 116 aa15.72■□□□□ 0.11
CCDC47-204ENST00000582252 Q9H8V8 135 aa15.72■□□□□ 0.11
CCDC47-204ENST00000582252 PRO1854Q9UHT4 67 aa15.72■□□□□ 0.11
CCDC47-204ENST00000582252 ICOSQ9Y6W8 199 aa15.72■□□□□ 0.11
CCDC47-204ENST00000582252 RBX1P62877 108 aa15.71■□□□□ 0.11
CCDC47-204ENST00000582252 COPS9Q8WXC6 57 aa15.71■□□□□ 0.11
CCDC47-204ENST00000582252 TSPAN13O95857 204 aa15.71■□□□□ 0.1
CCDC47-204ENST00000582252 PRSS2P07478 247 aa15.71■□□□□ 0.1
CCDC47-204ENST00000582252 HTN3P15516 51 aa15.7■□□□□ 0.1
CCDC47-204ENST00000582252 SS18Q15532 418 aa15.7■□□□□ 0.1
CCDC47-204ENST00000582252 LINC00959A0A1B0GUT2 108 aa15.69■□□□□ 0.1
CCDC47-204ENST00000582252 DEFB121Q5J5C9 76 aa15.68■□□□□ 0.1
CCDC47-204ENST00000582252 IGHV3OR16-9A0A0B4J2B5 98 aa15.67■□□□□ 0.1
CCDC47-204ENST00000582252 ADAMTSL4-AS1Q5T5F5 129 aa15.67■□□□□ 0.1
CCDC47-204ENST00000582252 COX7B2Q8TF08 81 aa15.67■□□□□ 0.1
CCDC47-204ENST00000582252 ZNF625Q96I27 306 aaPredicted RBP15.67■□□□□ 0.1
CCDC47-204ENST00000582252 C11orf68Q9H3H3 251 aaKnown RBP15.67■□□□□ 0.1
CCDC47-204ENST00000582252 A0A087WZ39 114 aa15.66■□□□□ 0.1
CCDC47-204ENST00000582252 MEIG1Q5JSS6 88 aa15.65■□□□□ 0.1
CCDC47-204ENST00000582252 SFTA2Q6UW10 78 aa15.65■□□□□ 0.1
CCDC47-204ENST00000582252 LELP1Q5T871 98 aa15.64■□□□□ 0.09
CCDC47-204ENST00000582252 ERG28Q9UKR5 140 aa15.64■□□□□ 0.09
CCDC47-204ENST00000582252 LOC107984156A0A0G2JMH3 177 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 ARL17AQ8IVW1 177 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 LINC01561Q8N1V8 128 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 RETNQ9HD89 108 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 TENM3Q9P273 2699 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 IGHV3-33P01772 117 aa15.63■□□□□ 0.09
CCDC47-204ENST00000582252 H3BNG1 76 aa15.62■□□□□ 0.09
CCDC47-204ENST00000582252 SPATA25Q9BR10 227 aa15.62■□□□□ 0.09
CCDC47-204ENST00000582252 MRAPQ8TCY5 172 aa15.61■□□□□ 0.09
CCDC47-204ENST00000582252 F8W1H4 67 aa15.6■□□□□ 0.09
CCDC47-204ENST00000582252 PPDPFQ9H3Y8 114 aa15.6■□□□□ 0.09
CCDC47-204ENST00000582252 TOMM7Q9P0U1 55 aa15.6■□□□□ 0.09
CCDC47-204ENST00000582252 TRBV20-1A0A075B6N2 111 aa15.6■□□□□ 0.09
CCDC47-204ENST00000582252 TM2D3Q9BRN9 247 aa15.6■□□□□ 0.09
CCDC47-204ENST00000582252 HUWE1Q7Z6Z7 4374 aaKnown RBP15.59■□□□□ 0.09
CCDC47-204ENST00000582252 C5orf38Q86SI9 138 aa15.59■□□□□ 0.09
CCDC47-204ENST00000582252 H3BMG7 143 aa15.58■□□□□ 0.08
CCDC47-204ENST00000582252 ANGP03950 147 aaKnown RBP15.58■□□□□ 0.08
CCDC47-204ENST00000582252 NPC2P61916 151 aa15.58■□□□□ 0.08
CCDC47-204ENST00000582252 Q1RN00 199 aa15.58■□□□□ 0.08
CCDC47-204ENST00000582252 LINC00308Q8TCZ7 52 aa15.58■□□□□ 0.08
CCDC47-204ENST00000582252 DNAH9Q9NYC9 4486 aa15.58■□□□□ 0.08
CCDC47-204ENST00000582252 SCGB1C2P0DMR2 95 aa15.57■□□□□ 0.08
CCDC47-204ENST00000582252 XCL1P47992 114 aa15.57■□□□□ 0.08
CCDC47-204ENST00000582252 PSMB2P49721 201 aa15.57■□□□□ 0.08
CCDC47-204ENST00000582252 LINC00269Q8N2A0 174 aa15.57■□□□□ 0.08
CCDC47-204ENST00000582252 EIF4EBP3O60516 100 aaPredicted RBP15.57■□□□□ 0.08
CCDC47-204ENST00000582252 CLPSL2Q6UWE3 100 aa15.56■□□□□ 0.08
CCDC47-204ENST00000582252 DAND5Q8N907 189 aa15.56■□□□□ 0.08
CCDC47-204ENST00000582252 REG3AQ06141 175 aa15.55■□□□□ 0.08
CCDC47-204ENST00000582252 CD164L2Q6UWJ8 174 aa15.55■□□□□ 0.08
CCDC47-204ENST00000582252 OCIAD2Q56VL3 154 aa15.54■□□□□ 0.08
CCDC47-204ENST00000582252 K7ERU9 68 aa15.54■□□□□ 0.08
CCDC47-204ENST00000582252 H7C2G1 150 aa15.53■□□□□ 0.08
CCDC47-204ENST00000582252 A0A0U1RRA0 63 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms