RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 F5H768 121 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 H3BNG1 76 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 TSPEAR-AS2P59090 65 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 SEC11AP67812 179 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 TAL2Q16559 108 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 LINC00242Q5T6M2 205 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 AMMECR1LQ6DCA0 310 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 SH2D6Q7Z4S9 175 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 PLEKHB2Q96CS7 222 aa12.27□□□□□ -0.45
EIF4A1-216ENST00000580888 HECTD4Q9Y4D8 3996 aa12.26□□□□□ -0.45
EIF4A1-216ENST00000580888 J3QQQ9 107 aa12.26□□□□□ -0.45
EIF4A1-216ENST00000580888 GAGE6Q13070 117 aa12.26□□□□□ -0.45
EIF4A1-216ENST00000580888 MRPL23Q16540 153 aaKnown RBP12.26□□□□□ -0.45
EIF4A1-216ENST00000580888 IGHV1-58A0A0C4DH39 117 aa12.25□□□□□ -0.45
EIF4A1-216ENST00000580888 A0A0J9YY99 117 aa12.25□□□□□ -0.45
EIF4A1-216ENST00000580888 HERVK_113P63121 156 aa12.25□□□□□ -0.45
EIF4A1-216ENST00000580888 BATFQ16520 125 aa12.25□□□□□ -0.45
EIF4A1-216ENST00000580888 IGLV4-60A0A075B6I1 120 aa12.24□□□□□ -0.45
EIF4A1-216ENST00000580888 ZNF815PA8K554 130 aa12.24□□□□□ -0.45
EIF4A1-216ENST00000580888 COX6A2Q02221 97 aa12.24□□□□□ -0.45
EIF4A1-216ENST00000580888 CHCHD5Q9BSY4 110 aa12.24□□□□□ -0.45
EIF4A1-216ENST00000580888 A0A096LPF7 62 aa12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 TM2D2Q9BX73 214 aa12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 GEMIN7Q9H840 131 aaKnown RBP12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 CDKN2A-AS1Q9UH64 79 aa12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 ICOSQ9Y6W8 199 aa12.23□□□□□ -0.45
EIF4A1-216ENST00000580888 DNAH17Q9UFH2 4485 aa12.22□□□□□ -0.45
EIF4A1-216ENST00000580888 IGLV5-39A0A0G2JS06 123 aa12.22□□□□□ -0.45
EIF4A1-216ENST00000580888 A0A1B0GV90 55 aa12.22□□□□□ -0.45
EIF4A1-216ENST00000580888 IGHV3-30-3P0DP02 117 aa12.22□□□□□ -0.45
EIF4A1-216ENST00000580888 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
EIF4A1-216ENST00000580888 H3BRM9 83 aa12.21□□□□□ -0.45
EIF4A1-216ENST00000580888 LINC00469Q8N7U9 141 aa12.21□□□□□ -0.45
EIF4A1-216ENST00000580888 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
EIF4A1-216ENST00000580888 RBX1P62877 108 aa12.2□□□□□ -0.46
EIF4A1-216ENST00000580888 LELP1Q5T871 98 aa12.2□□□□□ -0.46
EIF4A1-216ENST00000580888 SPANXB1Q9NS25 103 aaPredicted RBP12.2□□□□□ -0.46
EIF4A1-216ENST00000580888 DNAH2Q9P225 4427 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 TRAV10A0A0B4J240 114 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 HTN3P15516 51 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 Q6ZTC4 211 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 CEND1Q8N111 149 aa12.19□□□□□ -0.46
EIF4A1-216ENST00000580888 TRAV8-3A0A0A6YYJ7 113 aa12.18□□□□□ -0.46
EIF4A1-216ENST00000580888 IGLL5B9A064 214 aa12.18□□□□□ -0.46
EIF4A1-216ENST00000580888 TAX1BP3O14907 124 aa12.17□□□□□ -0.46
EIF4A1-216ENST00000580888 CCL25O15444 150 aa12.17□□□□□ -0.46
EIF4A1-216ENST00000580888 SPINK8P0C7L1 97 aa12.17□□□□□ -0.46
EIF4A1-216ENST00000580888 FAT2Q9NYQ8 4349 aa12.17□□□□□ -0.46
EIF4A1-216ENST00000580888 SMIM1B2RUZ4 78 aa12.16□□□□□ -0.46
EIF4A1-216ENST00000580888 HERC2O95714 4834 aa12.16□□□□□ -0.46
EIF4A1-216ENST00000580888 IGHV3OR16-9A0A0B4J2B5 98 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 LINC00959A0A1B0GUT2 108 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 A6NDN8 102 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 FXYD2P54710 66 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 C10orf126Q8N4M7 172 aa12.15□□□□□ -0.46
EIF4A1-216ENST00000580888 IGHV3-64A0A075B6Q5 118 aa12.14□□□□□ -0.47
EIF4A1-216ENST00000580888 SCGB1D4Q6XE38 83 aa12.14□□□□□ -0.47
EIF4A1-216ENST00000580888 A0A0J9YXY3 114 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 TMEM262E9PQX1 116 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 GCSHP23434 173 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 HIST1H4GQ99525 98 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 NDUFA12Q9UI09 145 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 COX11Q9Y6N1 276 aa12.13□□□□□ -0.47
EIF4A1-216ENST00000580888 DEFB131BA0A096LNP1 70 aa12.12□□□□□ -0.47
EIF4A1-216ENST00000580888 A0A1B0GWB2 263 aa12.12□□□□□ -0.47
EIF4A1-216ENST00000580888 NDUFA1O15239 70 aa12.12□□□□□ -0.47
EIF4A1-216ENST00000580888 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
EIF4A1-216ENST00000580888 A0A087WZ39 114 aa12.11□□□□□ -0.47
EIF4A1-216ENST00000580888 LITAFQ99732 161 aa12.11□□□□□ -0.47
EIF4A1-216ENST00000580888 K7EP13 123 aa12.1□□□□□ -0.47
EIF4A1-216ENST00000580888 TIMM17BO60830 172 aa12.1□□□□□ -0.47
EIF4A1-216ENST00000580888 IGHV3-30P01768 117 aa12.1□□□□□ -0.47
EIF4A1-216ENST00000580888 IGHV3-30-5P0DP03 117 aa12.1□□□□□ -0.47
EIF4A1-216ENST00000580888 SS18Q15532 418 aa12.09□□□□□ -0.47
EIF4A1-216ENST00000580888 ZNF625Q96I27 306 aaPredicted RBP12.08□□□□□ -0.48
EIF4A1-216ENST00000580888 PRR34Q9NV39 138 aa12.08□□□□□ -0.48
EIF4A1-216ENST00000580888 TMEM238C9JI98 176 aa12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 SMIM13P0DJ93 91 aa12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 SRSF9Q13242 221 aaKnown RBP eCLIP12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 Q6ZVH6 145 aa12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 SPANXDQ9BXN6 97 aa12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 SPANXCQ9NY87 97 aa12.07□□□□□ -0.48
EIF4A1-216ENST00000580888 PTTG1IPP53801 180 aa12.06□□□□□ -0.48
EIF4A1-216ENST00000580888 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
EIF4A1-216ENST00000580888 Q8N3U1 123 aa12.06□□□□□ -0.48
EIF4A1-216ENST00000580888 PKHD1P08F94 4074 aa12.06□□□□□ -0.48
EIF4A1-216ENST00000580888 PKD1P98161 4303 aa12.05□□□□□ -0.48
EIF4A1-216ENST00000580888 DNAH11Q96DT5 4516 aa12.05□□□□□ -0.48
EIF4A1-216ENST00000580888 IGKV3OR2-268A0A0C4DH90 116 aa12.05□□□□□ -0.48
EIF4A1-216ENST00000580888 C9orf118A6NHY6 69 aa12.05□□□□□ -0.48
EIF4A1-216ENST00000580888 REG3AQ06141 175 aa12.05□□□□□ -0.48
EIF4A1-216ENST00000580888 ANGP03950 147 aaKnown RBP12.04□□□□□ -0.48
EIF4A1-216ENST00000580888 ESRGQ1W209 222 aa12.04□□□□□ -0.48
EIF4A1-216ENST00000580888 CD164L2Q6UWJ8 174 aa12.04□□□□□ -0.48
EIF4A1-216ENST00000580888 DYNC1H1Q14204 4646 aaKnown RBP12.03□□□□□ -0.48
EIF4A1-216ENST00000580888 TMEM238LA0A1B0GVL6 79 aa12.03□□□□□ -0.48
EIF4A1-216ENST00000580888 A6NJY4 79 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms