RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 LINC00269Q8N2A0 174 aa8.78□□□□□ -1
RPAIN-216ENST00000575599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1.01
RPAIN-216ENST00000575599 CDK2AP2O75956 126 aa8.77□□□□□ -1.01
RPAIN-216ENST00000575599 Q6ZN92 141 aa8.77□□□□□ -1.01
RPAIN-216ENST00000575599 PACRGQ96M98 296 aaPredicted RBP8.77□□□□□ -1.01
RPAIN-216ENST00000575599 APOBP04114 4563 aaKnown RBP8.77□□□□□ -1.01
RPAIN-216ENST00000575599 A0A096LNJ9 63 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 FGF6P10767 208 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 MIAQ16674 131 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 PAPPA-AS1Q5QFB9 102 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 ERASQ7Z444 233 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 OR5A1Q8NGJ0 315 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-216ENST00000575599 TMEM141Q96I45 108 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 HIST1H2BLQ99880 126 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 MAP1LC3CQ9BXW4 147 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 SPANXA1Q9NS26 97 aa8.76□□□□□ -1.01
RPAIN-216ENST00000575599 IGLV4-60A0A075B6I1 120 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-216ENST00000575599 ZNF25P17030 456 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-216ENST00000575599 GCSHP23434 173 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 KRTAP10-1P60331 282 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 REG3AQ06141 175 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 IFI27L1Q96BM0 104 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 PRR34Q9NV39 138 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 HSPG2P98160 4391 aa8.75□□□□□ -1.01
RPAIN-216ENST00000575599 H0Y8G0 127 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 PRSS1P07477 247 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 KRTDAPP60985 99 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 TIMM17AQ99595 171 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 TIMM21Q9BVV7 248 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 PYGO1Q9Y3Y4 419 aa8.74□□□□□ -1.01
RPAIN-216ENST00000575599 IGLV10-54A0A075B6I4 117 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 A0A1B0GUV1 79 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 MRPL52Q86TS9 123 aaKnown RBP8.73□□□□□ -1.01
RPAIN-216ENST00000575599 VCX2Q9H322 139 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 IGIPA6NJ69 53 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 FAM229AH3BQW9 127 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 NPSP0C0P6 89 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 AKR1D1P51857 326 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 OR10D4PQ8NGN7 298 aa8.73□□□□□ -1.01
RPAIN-216ENST00000575599 CSDC2Q9Y534 153 aaKnown RBP8.73□□□□□ -1.01
RPAIN-216ENST00000575599 IGKV3OR2-268A0A0C4DH90 116 aa8.72□□□□□ -1.01
RPAIN-216ENST00000575599 TEX43Q6ZNM6 134 aa8.72□□□□□ -1.01
RPAIN-216ENST00000575599 LINC00173Q6ZV60 143 aa8.72□□□□□ -1.01
RPAIN-216ENST00000575599 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
RPAIN-216ENST00000575599 C2orf88Q9BSF0 95 aa8.72□□□□□ -1.01
RPAIN-216ENST00000575599 IGLV4-3A0A075B6K6 122 aa8.71□□□□□ -1.02
RPAIN-216ENST00000575599 C20orf202A1L168 122 aa8.71□□□□□ -1.02
RPAIN-216ENST00000575599 IFITM10A6NMD0 228 aa8.71□□□□□ -1.02
RPAIN-216ENST00000575599 MRPS36P82909 103 aaKnown RBP8.71□□□□□ -1.02
RPAIN-216ENST00000575599 USP17L23D6RBM5 183 aa8.7□□□□□ -1.02
RPAIN-216ENST00000575599 PMVKQ15126 192 aa8.7□□□□□ -1.02
RPAIN-216ENST00000575599 Q6ZUT4 128 aa8.7□□□□□ -1.02
RPAIN-216ENST00000575599 OPRPNQ99935 248 aaPredicted RBP8.7□□□□□ -1.02
RPAIN-216ENST00000575599 KRTAP4-11Q9BYQ6 195 aa8.7□□□□□ -1.02
RPAIN-216ENST00000575599 CDC42SE2Q9NRR3 84 aa8.7□□□□□ -1.02
RPAIN-216ENST00000575599 TRAV8-4A0A0B4J246 113 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 C3orf79P0CE67 100 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 RNASE13Q5GAN3 156 aaKnown RBP8.69□□□□□ -1.02
RPAIN-216ENST00000575599 KRTAP26-1Q6PEX3 210 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 PET117Q6UWS5 81 aa8.69□□□□□ -1.02
RPAIN-216ENST00000575599 SCGB1D1O95968 90 aa8.68□□□□□ -1.02
RPAIN-216ENST00000575599 HAMPP81172 84 aa8.68□□□□□ -1.02
RPAIN-216ENST00000575599 LINC01620Q4KN68 170 aa8.68□□□□□ -1.02
RPAIN-216ENST00000575599 TRAV12-1A0A0B4J245 112 aa8.67□□□□□ -1.02
RPAIN-216ENST00000575599 XGP55808 180 aa8.67□□□□□ -1.02
RPAIN-216ENST00000575599 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
RPAIN-216ENST00000575599 CHTOPQ9Y3Y2 248 aaKnown RBP8.67□□□□□ -1.02
RPAIN-216ENST00000575599 TRAV13-1A0A0B4J241 112 aa8.66□□□□□ -1.02
RPAIN-216ENST00000575599 ZC2HC1BQ5TFG8 222 aa8.66□□□□□ -1.02
RPAIN-216ENST00000575599 AMELXQ99217 191 aa8.66□□□□□ -1.02
RPAIN-216ENST00000575599 GAGE12HA6NDE8 117 aa8.65□□□□□ -1.02
RPAIN-216ENST00000575599 SS18Q15532 418 aa8.65□□□□□ -1.02
RPAIN-216ENST00000575599 Q8N1X5 172 aa8.65□□□□□ -1.02
RPAIN-216ENST00000575599 KRTAP4-5Q9BYR2 181 aa8.65□□□□□ -1.02
RPAIN-216ENST00000575599 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
RPAIN-216ENST00000575599 F8VRH5 84 aa8.64□□□□□ -1.03
RPAIN-216ENST00000575599 SEC11AP67812 179 aa8.64□□□□□ -1.03
RPAIN-216ENST00000575599 CHCHD10Q8WYQ3 142 aaPredicted RBP8.64□□□□□ -1.03
RPAIN-216ENST00000575599 FAM30AQ9NZY2 134 aa8.64□□□□□ -1.03
RPAIN-216ENST00000575599 DPM2O94777 84 aa8.63□□□□□ -1.03
RPAIN-216ENST00000575599 ODF1Q14990 250 aa8.63□□□□□ -1.03
RPAIN-216ENST00000575599 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
RPAIN-216ENST00000575599 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
RPAIN-216ENST00000575599 GEMIN7Q9H840 131 aaKnown RBP8.63□□□□□ -1.03
RPAIN-216ENST00000575599 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
RPAIN-216ENST00000575599 hDV102S1A0JD36 115 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 CCL25O15444 150 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 PLNP26678 52 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 FAM104AQ969W3 186 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 PCLOQ9Y6V0 5065 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 DNAH8Q96JB1 4490 aa8.62□□□□□ -1.03
RPAIN-216ENST00000575599 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 LINC00959A0A1B0GUT2 108 aa8.61□□□□□ -1.03
RPAIN-216ENST00000575599 IGKCP01834 107 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms