RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TAX1BP3O14907 124 aa19.63■□□□□ 0.73
CTDNEP1-210ENST00000574322 SPANXB1Q9NS25 103 aaPredicted RBP19.63■□□□□ 0.73
CTDNEP1-210ENST00000574322 A0A0J9YWU9 116 aa19.62■□□□□ 0.73
CTDNEP1-210ENST00000574322 RBX1P62877 108 aa19.62■□□□□ 0.73
CTDNEP1-210ENST00000574322 FXYD2P54710 66 aa19.62■□□□□ 0.73
CTDNEP1-210ENST00000574322 COX11Q9Y6N1 276 aa19.61■□□□□ 0.73
CTDNEP1-210ENST00000574322 TMEM262E9PQX1 116 aa19.59■□□□□ 0.73
CTDNEP1-210ENST00000574322 LELP1Q5T871 98 aa19.59■□□□□ 0.73
CTDNEP1-210ENST00000574322 ZFAND6Q6FIF0 208 aa19.59■□□□□ 0.73
CTDNEP1-210ENST00000574322 Q6ZTC4 211 aa19.59■□□□□ 0.73
CTDNEP1-210ENST00000574322 SMIM1B2RUZ4 78 aa19.58■□□□□ 0.72
CTDNEP1-210ENST00000574322 C10orf126Q8N4M7 172 aa19.58■□□□□ 0.72
CTDNEP1-210ENST00000574322 NDUFA12Q9UI09 145 aa19.56■□□□□ 0.72
CTDNEP1-210ENST00000574322 C11orf45Q8TAV5 145 aa19.56■□□□□ 0.72
CTDNEP1-210ENST00000574322 LINC00959A0A1B0GUT2 108 aa19.55■□□□□ 0.72
CTDNEP1-210ENST00000574322 K7EP13 123 aa19.55■□□□□ 0.72
CTDNEP1-210ENST00000574322 CCL25O15444 150 aa19.55■□□□□ 0.72
CTDNEP1-210ENST00000574322 A0A0J9YXY3 114 aa19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 NHLRC4P0CG21 123 aaPredicted RBP19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 PTTG1IPP53801 180 aa19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 SRSF9Q13242 221 aaKnown RBP eCLIP19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 IGHV3OR16-9A0A0B4J2B5 98 aa19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 Q6ZVH6 145 aa19.54■□□□□ 0.72
CTDNEP1-210ENST00000574322 TENM3Q9P273 2699 aa19.53■□□□□ 0.72
CTDNEP1-210ENST00000574322 DNAH9Q9NYC9 4486 aa19.53■□□□□ 0.72
CTDNEP1-210ENST00000574322 NDUFA1O15239 70 aa19.52■□□□□ 0.72
CTDNEP1-210ENST00000574322 LYPD5Q6UWN5 251 aa19.52■□□□□ 0.72
CTDNEP1-210ENST00000574322 SMIM13P0DJ93 91 aa19.51■□□□□ 0.71
CTDNEP1-210ENST00000574322 NANOS2P60321 138 aaKnown RBP19.51■□□□□ 0.71
CTDNEP1-210ENST00000574322 IGHV3-30P01768 117 aa19.51■□□□□ 0.71
CTDNEP1-210ENST00000574322 IGHV3-30-5P0DP03 117 aa19.51■□□□□ 0.71
CTDNEP1-210ENST00000574322 A0A1B0GWB2 263 aa19.5■□□□□ 0.71
CTDNEP1-210ENST00000574322 TMEM238C9JI98 176 aa19.5■□□□□ 0.71
CTDNEP1-210ENST00000574322 IGKV3OR2-268A0A0C4DH90 116 aa19.49■□□□□ 0.71
CTDNEP1-210ENST00000574322 SS18Q15532 418 aa19.48■□□□□ 0.71
CTDNEP1-210ENST00000574322 LITAFQ99732 161 aa19.48■□□□□ 0.71
CTDNEP1-210ENST00000574322 A0A087WZ39 114 aa19.48■□□□□ 0.71
CTDNEP1-210ENST00000574322 DEFB131BA0A096LNP1 70 aa19.47■□□□□ 0.71
CTDNEP1-210ENST00000574322 TIMM17BO60830 172 aa19.47■□□□□ 0.71
CTDNEP1-210ENST00000574322 NHP2Q9NX24 153 aaKnown RBP19.47■□□□□ 0.71
CTDNEP1-210ENST00000574322 TMEM238LA0A1B0GVL6 79 aa19.46■□□□□ 0.71
CTDNEP1-210ENST00000574322 C9orf118A6NHY6 69 aa19.46■□□□□ 0.71
CTDNEP1-210ENST00000574322 A6NJY4 79 aa19.46■□□□□ 0.71
CTDNEP1-210ENST00000574322 HUWE1Q7Z6Z7 4374 aaKnown RBP19.45■□□□□ 0.7
CTDNEP1-210ENST00000574322 LINC01561Q8N1V8 128 aa19.44■□□□□ 0.7
CTDNEP1-210ENST00000574322 LINC00269Q8N2A0 174 aa19.44■□□□□ 0.7
CTDNEP1-210ENST00000574322 ZNF625Q96I27 306 aaPredicted RBP19.43■□□□□ 0.7
CTDNEP1-210ENST00000574322 SPANXDQ9BXN6 97 aa19.42■□□□□ 0.7
CTDNEP1-210ENST00000574322 SPANXCQ9NY87 97 aa19.42■□□□□ 0.7
CTDNEP1-210ENST00000574322 ANGP03950 147 aaKnown RBP19.42■□□□□ 0.7
CTDNEP1-210ENST00000574322 Q8N3U1 123 aa19.42■□□□□ 0.7
CTDNEP1-210ENST00000574322 REG3AQ06141 175 aa19.41■□□□□ 0.7
CTDNEP1-210ENST00000574322 Q9H8V8 135 aa19.41■□□□□ 0.7
CTDNEP1-210ENST00000574322 K7ERJ3 54 aa19.4■□□□□ 0.7
CTDNEP1-210ENST00000574322 TRAV10A0A0B4J240 114 aa19.39■□□□□ 0.7
CTDNEP1-210ENST00000574322 RAB37Q96AX2 223 aa19.39■□□□□ 0.7
CTDNEP1-210ENST00000574322 COL7A1Q02388 2944 aa19.39■□□□□ 0.69
CTDNEP1-210ENST00000574322 HERV-K104P63124 156 aa19.39■□□□□ 0.69
CTDNEP1-210ENST00000574322 PRR34Q9NV39 138 aa19.39■□□□□ 0.69
CTDNEP1-210ENST00000574322 CD164L2Q6UWJ8 174 aa19.38■□□□□ 0.69
CTDNEP1-210ENST00000574322 COX7B2Q8TF08 81 aa19.38■□□□□ 0.69
CTDNEP1-210ENST00000574322 ADAMTSL4-AS1Q5T5F5 129 aa19.37■□□□□ 0.69
CTDNEP1-210ENST00000574322 CLPSL2Q6UWE3 100 aa19.37■□□□□ 0.69
CTDNEP1-210ENST00000574322 XCL1P47992 114 aa19.37■□□□□ 0.69
CTDNEP1-210ENST00000574322 C5orf38Q86SI9 138 aa19.37■□□□□ 0.69
CTDNEP1-210ENST00000574322 RPL24P83731 157 aaKnown RBP19.36■□□□□ 0.69
CTDNEP1-210ENST00000574322 MIAQ16674 131 aa19.36■□□□□ 0.69
CTDNEP1-210ENST00000574322 H3BUT2 72 aa19.35■□□□□ 0.69
CTDNEP1-210ENST00000574322 MUSTN1Q8IVN3 82 aa19.35■□□□□ 0.69
CTDNEP1-210ENST00000574322 CIRBPQ14011 172 aaKnown RBP19.34■□□□□ 0.69
CTDNEP1-210ENST00000574322 VAMP3Q15836 100 aa19.34■□□□□ 0.69
CTDNEP1-210ENST00000574322 ESRGQ1W209 222 aa19.34■□□□□ 0.69
CTDNEP1-210ENST00000574322 CHCHD10Q8WYQ3 142 aaPredicted RBP19.34■□□□□ 0.69
CTDNEP1-210ENST00000574322 IFITM1P13164 125 aa19.32■□□□□ 0.68
CTDNEP1-210ENST00000574322 UBE2V1Q13404 147 aa19.32■□□□□ 0.68
CTDNEP1-210ENST00000574322 IGLL5B9A064 214 aa19.31■□□□□ 0.68
CTDNEP1-210ENST00000574322 SFTA2Q6UW10 78 aa19.31■□□□□ 0.68
CTDNEP1-210ENST00000574322 C15orf53Q8NAA6 179 aa19.31■□□□□ 0.68
CTDNEP1-210ENST00000574322 A0A1W2PPM0 123 aa19.3■□□□□ 0.68
CTDNEP1-210ENST00000574322 A4D1N5 150 aa19.3■□□□□ 0.68
CTDNEP1-210ENST00000574322 CFC1BP0CG36 223 aa19.3■□□□□ 0.68
CTDNEP1-210ENST00000574322 CFC1P0CG37 223 aa19.3■□□□□ 0.68
CTDNEP1-210ENST00000574322 TGP01266 2768 aa19.3■□□□□ 0.68
CTDNEP1-210ENST00000574322 WFDC10BQ8IUB3 73 aa19.29■□□□□ 0.68
CTDNEP1-210ENST00000574322 KLK12Q9UKR0 248 aa19.29■□□□□ 0.68
CTDNEP1-210ENST00000574322 STAB2Q8WWQ8 2551 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 COX7A2LO14548 114 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 PRSS2P07478 247 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 ENHOQ6UWT2 76 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 Q8IZM0 81 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 TOMM7Q9P0U1 55 aa19.28■□□□□ 0.68
CTDNEP1-210ENST00000574322 TRAV16A0A0A6YYK6 109 aaPredicted RBP19.27■□□□□ 0.68
CTDNEP1-210ENST00000574322 FOXI1Q12951 378 aa19.27■□□□□ 0.68
CTDNEP1-210ENST00000574322 NAA38Q9BRA0 125 aaKnown RBP19.27■□□□□ 0.68
CTDNEP1-210ENST00000574322 PPDPFQ9H3Y8 114 aa19.27■□□□□ 0.68
CTDNEP1-210ENST00000574322 A0A0B4J2C4 111 aa19.26■□□□□ 0.67
CTDNEP1-210ENST00000574322 TRAV8-4A0A0B4J246 113 aa19.25■□□□□ 0.67
CTDNEP1-210ENST00000574322 APOMO95445 188 aa19.25■□□□□ 0.67
CTDNEP1-210ENST00000574322 IGHV3-33P01772 117 aa19.25■□□□□ 0.67
CTDNEP1-210ENST00000574322 IGLV10-54A0A075B6I4 117 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms