RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 IL17DQ8TAD2 202 aa12.41□□□□□ -0.42
SCARF1-205ENST00000571272 COPS9Q8WXC6 57 aa12.41□□□□□ -0.42
SCARF1-205ENST00000571272 BAALC-AS2P0C853 105 aa12.41□□□□□ -0.42
SCARF1-205ENST00000571272 FAM19A3Q7Z5A8 133 aa12.41□□□□□ -0.42
SCARF1-205ENST00000571272 TRBV10-1A0A0K0K1A3 114 aa12.4□□□□□ -0.42
SCARF1-205ENST00000571272 UBE2L6O14933 153 aa12.4□□□□□ -0.42
SCARF1-205ENST00000571272 LOC100131303A0A0U1RQF7 123 aa12.4□□□□□ -0.42
SCARF1-205ENST00000571272 TOMM7Q9P0U1 55 aa12.4□□□□□ -0.42
SCARF1-205ENST00000571272 SETXQ7Z333 2677 aaKnown RBP12.4□□□□□ -0.43
SCARF1-205ENST00000571272 Q9HAA7 133 aa12.39□□□□□ -0.43
SCARF1-205ENST00000571272 SMCR5Q8TEV8 140 aa12.39□□□□□ -0.43
SCARF1-205ENST00000571272 HERV-K104P63124 156 aa12.38□□□□□ -0.43
SCARF1-205ENST00000571272 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
SCARF1-205ENST00000571272 TRBV7-7A0A0K0K1E9 115 aa12.37□□□□□ -0.43
SCARF1-205ENST00000571272 PRB1P04280 392 aa12.37□□□□□ -0.43
SCARF1-205ENST00000571272 MIR7-3HGQ8N6C7 128 aa12.37□□□□□ -0.43
SCARF1-205ENST00000571272 NBPF19A0A087WUL8 3843 aa12.37□□□□□ -0.43
SCARF1-205ENST00000571272 TRACP01848 142 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 TRGV2A0A075B6R0 118 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 PLA2G2AP14555 144 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 WFDC10AQ9H1F0 79 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 C22orf24Q9Y442 160 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 FAM236AA0A1B0GUQ0 79 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 FAM236BA0A1B0GV22 79 aa12.36□□□□□ -0.43
SCARF1-205ENST00000571272 ACYP1P07311 99 aa12.35□□□□□ -0.43
SCARF1-205ENST00000571272 HIST2H2BCQ6DN03 193 aa12.35□□□□□ -0.43
SCARF1-205ENST00000571272 LINC00337Q8N6G1 96 aa12.35□□□□□ -0.43
SCARF1-205ENST00000571272 CRPP02741 224 aa12.34□□□□□ -0.43
SCARF1-205ENST00000571272 COX7B2Q8TF08 81 aa12.34□□□□□ -0.43
SCARF1-205ENST00000571272 CCL24O00175 119 aa12.33□□□□□ -0.44
SCARF1-205ENST00000571272 FN1P02751 2386 aaKnown RBP12.33□□□□□ -0.44
SCARF1-205ENST00000571272 RPL35AP18077 110 aaKnown RBP12.33□□□□□ -0.44
SCARF1-205ENST00000571272 SVIPQ8NHG7 77 aa12.33□□□□□ -0.44
SCARF1-205ENST00000571272 SND1-IT1Q9HBX3 110 aa12.33□□□□□ -0.44
SCARF1-205ENST00000571272 IGKV2-28A0A075B6P5 120 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 TRAV25A0A0B4J276 109 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 IGKV2D-28P01615 120 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 LINC00158P58513 81 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
SCARF1-205ENST00000571272 IGLV4-60A0A075B6I1 120 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 TRAV13-2A0A0B4J235 113 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
SCARF1-205ENST00000571272 ITPR3Q14573 2671 aa12.31□□□□□ -0.44
SCARF1-205ENST00000571272 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
SCARF1-205ENST00000571272 RPL28P46779 137 aaKnown RBP12.3□□□□□ -0.44
SCARF1-205ENST00000571272 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
SCARF1-205ENST00000571272 TRGV4A0A0C4DH28 118 aa12.3□□□□□ -0.44
SCARF1-205ENST00000571272 MALP21145 153 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 PFN2P35080 140 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 DEFB113Q30KQ7 82 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 SMIM20Q8N5G0 67 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 SMIM11BQ8TCY0 68 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 MTORP42345 2549 aa12.29□□□□□ -0.44
SCARF1-205ENST00000571272 A0A087WYN8 130 aa12.28□□□□□ -0.44
SCARF1-205ENST00000571272 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
SCARF1-205ENST00000571272 PF4P02776 101 aa12.28□□□□□ -0.44
SCARF1-205ENST00000571272 CCL18P55774 89 aa12.28□□□□□ -0.44
SCARF1-205ENST00000571272 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
SCARF1-205ENST00000571272 ATP5G1P05496 136 aa12.27□□□□□ -0.45
SCARF1-205ENST00000571272 FLNAP21333 2647 aaKnown RBP12.27□□□□□ -0.45
SCARF1-205ENST00000571272 DNAJC9-AS1A6NH13 148 aa12.27□□□□□ -0.45
SCARF1-205ENST00000571272 C9orf129Q5T035 196 aaKnown RBP12.27□□□□□ -0.45
SCARF1-205ENST00000571272 C11orf68Q9H3H3 251 aaKnown RBP12.27□□□□□ -0.45
SCARF1-205ENST00000571272 APCP25054 2843 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 ACANP16112 2415 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 DNAL4O96015 105 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 FAM222AQ5U5X8 452 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 C16orf74Q96GX8 76 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 INAFM2P0DMQ5 153 aa12.26□□□□□ -0.45
SCARF1-205ENST00000571272 IGHV3OR16-9A0A0B4J2B5 98 aa12.25□□□□□ -0.45
SCARF1-205ENST00000571272 TRBV6-4A0A1B0GX49 114 aa12.25□□□□□ -0.45
SCARF1-205ENST00000571272 USP24Q9UPU5 2620 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 TRBV6-8A0A0A6YYG3 113 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 ESM1Q9NQ30 184 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 PAX4O43316 350 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 OR13C6PQ8NH95 151 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 C14orf132Q9NPU4 83 aa12.24□□□□□ -0.45
SCARF1-205ENST00000571272 SDIM1Q6ZPB5 146 aa12.23□□□□□ -0.45
SCARF1-205ENST00000571272 PPDPFQ9H3Y8 114 aa12.23□□□□□ -0.45
SCARF1-205ENST00000571272 FHL2Q14192 279 aa12.22□□□□□ -0.45
SCARF1-205ENST00000571272 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
SCARF1-205ENST00000571272 LECT2O14960 151 aa12.21□□□□□ -0.45
SCARF1-205ENST00000571272 SLPIP03973 132 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 A0A087WZ39 114 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 DEFB130BP0DP73 79 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 DEFB130AP0DP74 79 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 TMEM86BQ8N661 226 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 IBA57-AS1B1ANH7 110 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 KRTAP1-3Q8IUG1 177 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 CSNK1G2-AS1Q8NCQ2 148 aa12.2□□□□□ -0.46
SCARF1-205ENST00000571272 BBC3Q96PG8 261 aaPredicted RBP12.2□□□□□ -0.46
SCARF1-205ENST00000571272 C6orf226Q5I0X4 101 aa12.19□□□□□ -0.46
SCARF1-205ENST00000571272 OVOL2Q9BRP0 275 aa12.19□□□□□ -0.46
SCARF1-205ENST00000571272 NBEAL2Q6ZNJ1 2754 aa12.19□□□□□ -0.46
SCARF1-205ENST00000571272 C19orf73Q9NVV2 129 aa12.19□□□□□ -0.46
SCARF1-205ENST00000571272 GCN1Q92616 2671 aaKnown RBP12.19□□□□□ -0.46
SCARF1-205ENST00000571272 XCL1P47992 114 aa12.18□□□□□ -0.46
SCARF1-205ENST00000571272 C9orf153Q5TBE3 101 aa12.18□□□□□ -0.46
SCARF1-205ENST00000571272 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms