RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 LOC107984640A0A0U1RRK4 108 aa10.89□□□□□ -0.67
RPA1-203ENST00000571058 IFITM10A6NMD0 228 aa10.89□□□□□ -0.67
RPA1-203ENST00000571058 FAM104AQ969W3 186 aa10.89□□□□□ -0.67
RPA1-203ENST00000571058 CAMK2N2Q96S95 79 aa10.89□□□□□ -0.67
RPA1-203ENST00000571058 IGHV3OR16-9A0A0B4J2B5 98 aa10.88□□□□□ -0.67
RPA1-203ENST00000571058 Q6ZRU5 148 aa10.88□□□□□ -0.67
RPA1-203ENST00000571058 CTDSP1Q9GZU7 261 aa10.88□□□□□ -0.67
RPA1-203ENST00000571058 TRAV9-1A0A075B6T8 112 aa10.87□□□□□ -0.67
RPA1-203ENST00000571058 TMEM218A2RU14 115 aa10.87□□□□□ -0.67
RPA1-203ENST00000571058 HNRNPA3P51991 378 aaKnown RBP10.87□□□□□ -0.67
RPA1-203ENST00000571058 SPAG11BQ08648 103 aa10.87□□□□□ -0.67
RPA1-203ENST00000571058 Q8N8P6 123 aa10.87□□□□□ -0.67
RPA1-203ENST00000571058 OPRPNQ99935 248 aaPredicted RBP10.87□□□□□ -0.67
RPA1-203ENST00000571058 TGIF2-C20orf24A0A0A6YYL0 155 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 LOC389332A0A1B0GUA5 103 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 NPSP0C0P6 89 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 PTTG1IPP53801 180 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 RNF151Q2KHN1 245 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 ORMDL2Q53FV1 153 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 TMEM141Q96I45 108 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 NXT2Q9NPJ8 142 aaKnown RBP10.86□□□□□ -0.67
RPA1-203ENST00000571058 CYSLTR1Q9Y271 337 aa10.86□□□□□ -0.67
RPA1-203ENST00000571058 G0S2P27469 103 aa10.85□□□□□ -0.67
RPA1-203ENST00000571058 IGLV4-3A0A075B6K6 122 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 IFITM2Q01629 132 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 Q6ZN92 141 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 TEX43Q6ZNM6 134 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 ORAOV1Q8WV07 137 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 SEC11CQ9BY50 192 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 PKHD1L1Q86WI1 4243 aa10.84□□□□□ -0.67
RPA1-203ENST00000571058 ADCYAP1P18509 176 aa10.83□□□□□ -0.68
RPA1-203ENST00000571058 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
RPA1-203ENST00000571058 C2orf88Q9BSF0 95 aa10.83□□□□□ -0.68
RPA1-203ENST00000571058 MRPL35Q9NZE8 188 aaKnown RBP10.83□□□□□ -0.68
RPA1-203ENST00000571058 LRP1Q07954 4544 aaKnown RBP10.83□□□□□ -0.68
RPA1-203ENST00000571058 A0A087WZ39 114 aa10.82□□□□□ -0.68
RPA1-203ENST00000571058 NDUFA1O15239 70 aa10.82□□□□□ -0.68
RPA1-203ENST00000571058 S100PP25815 95 aa10.82□□□□□ -0.68
RPA1-203ENST00000571058 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
RPA1-203ENST00000571058 SERTAD4-AS1Q5TG53 156 aa10.82□□□□□ -0.68
RPA1-203ENST00000571058 PRR3P79522 188 aaKnown RBP10.81□□□□□ -0.68
RPA1-203ENST00000571058 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
RPA1-203ENST00000571058 LINC00242Q5T6M2 205 aa10.81□□□□□ -0.68
RPA1-203ENST00000571058 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.8□□□□□ -0.68
RPA1-203ENST00000571058 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
RPA1-203ENST00000571058 VCX2Q9H322 139 aa10.8□□□□□ -0.68
RPA1-203ENST00000571058 FAT3Q8TDW7 4589 aa10.8□□□□□ -0.68
RPA1-203ENST00000571058 UBE2D1P51668 147 aa10.79□□□□□ -0.68
RPA1-203ENST00000571058 RPL18AQ02543 176 aaKnown RBP10.79□□□□□ -0.68
RPA1-203ENST00000571058 COX19Q49B96 90 aa10.79□□□□□ -0.68
RPA1-203ENST00000571058 AMELXQ99217 191 aa10.79□□□□□ -0.68
RPA1-203ENST00000571058 GNB1LQ9BYB4 327 aa10.79□□□□□ -0.68
RPA1-203ENST00000571058 Q6ZRP5 223 aa10.78□□□□□ -0.68
RPA1-203ENST00000571058 LINC01549A6NIU2 74 aa10.77□□□□□ -0.69
RPA1-203ENST00000571058 IGIPA6NJ69 53 aa10.77□□□□□ -0.69
RPA1-203ENST00000571058 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
RPA1-203ENST00000571058 SEC11AP67812 179 aa10.77□□□□□ -0.69
RPA1-203ENST00000571058 COMMD7Q86VX2 200 aa10.77□□□□□ -0.69
RPA1-203ENST00000571058 FAM19A3Q7Z5A8 133 aa10.76□□□□□ -0.69
RPA1-203ENST00000571058 TIMM17AQ99595 171 aa10.76□□□□□ -0.69
RPA1-203ENST00000571058 MT-ND6P03923 174 aa10.75□□□□□ -0.69
RPA1-203ENST00000571058 RHEBQ15382 184 aa10.75□□□□□ -0.69
RPA1-203ENST00000571058 C9orf116Q5BN46 136 aaPredicted RBP10.75□□□□□ -0.69
RPA1-203ENST00000571058 C10orf91Q5T1B1 145 aa10.75□□□□□ -0.69
RPA1-203ENST00000571058 LINC00173Q6ZV60 143 aa10.75□□□□□ -0.69
RPA1-203ENST00000571058 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 TRBV30A0A0K0K1B3 111 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 KIAA0087Q14695 138 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 KIAA1644Q3SXP7 199 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 SPINK6Q6UWN8 80 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 UNQ6190/PRO20217Q6UXQ8 127 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 TOMM6Q96B49 74 aa10.74□□□□□ -0.69
RPA1-203ENST00000571058 A0A1W2PNN7 141 aa10.73□□□□□ -0.69
RPA1-203ENST00000571058 HERVK_113P63121 156 aa10.73□□□□□ -0.69
RPA1-203ENST00000571058 C10orf25Q5T742 122 aa10.73□□□□□ -0.69
RPA1-203ENST00000571058 ERASQ7Z444 233 aa10.73□□□□□ -0.69
RPA1-203ENST00000571058 C6orf48Q9UBA6 75 aa10.73□□□□□ -0.69
RPA1-203ENST00000571058 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
RPA1-203ENST00000571058 PACRGQ96M98 296 aaPredicted RBP10.72□□□□□ -0.69
RPA1-203ENST00000571058 LINC01546A6NGU7 62 aa10.71□□□□□ -0.69
RPA1-203ENST00000571058 PRSS2P07478 247 aa10.71□□□□□ -0.69
RPA1-203ENST00000571058 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
RPA1-203ENST00000571058 ALKBH7Q9BT30 221 aaPredicted RBP10.71□□□□□ -0.69
RPA1-203ENST00000571058 ZC2HC1BQ5TFG8 222 aa10.7□□□□□ -0.7
RPA1-203ENST00000571058 REG3GQ6UW15 175 aa10.7□□□□□ -0.7
RPA1-203ENST00000571058 SCGB3A1Q96QR1 104 aa10.7□□□□□ -0.7
RPA1-203ENST00000571058 GEMIN7Q9H840 131 aaKnown RBP10.7□□□□□ -0.7
RPA1-203ENST00000571058 RPS10P5Q9NQ39 176 aa10.7□□□□□ -0.7
RPA1-203ENST00000571058 NDUFC2-KCTD14E9PQ53 114 aa10.69□□□□□ -0.7
RPA1-203ENST00000571058 CKS1BP61024 79 aa10.69□□□□□ -0.7
RPA1-203ENST00000571058 Q8IZM0 81 aa10.69□□□□□ -0.7
RPA1-203ENST00000571058 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
RPA1-203ENST00000571058 C6orf226Q5I0X4 101 aa10.68□□□□□ -0.7
RPA1-203ENST00000571058 LINC01600Q96MT4 127 aa10.68□□□□□ -0.7
RPA1-203ENST00000571058 MRPL18Q9H0U6 180 aaKnown RBP10.68□□□□□ -0.7
RPA1-203ENST00000571058 FABP9Q0Z7S8 132 aa10.67□□□□□ -0.7
RPA1-203ENST00000571058 GAGE2EQ4V326 116 aa10.67□□□□□ -0.7
RPA1-203ENST00000571058 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
RPA1-203ENST00000571058 SMCO4Q9NRQ5 59 aa10.67□□□□□ -0.7
RPA1-203ENST00000571058 GAGE2DQ9UEU5 116 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms