RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 NISCHQ9Y2I1 1504 aa42.49■■■■■ 4.39
RPA1-203ENST00000571058 CCDC180Q9P1Z9 1646 aa37.99■■■■□ 3.67
RPA1-203ENST00000571058 ABCC9O60706 1549 aa37.4■■■■□ 3.58
RPA1-203ENST00000571058 RB1CC1Q8TDY2 1594 aa35.92■■■■□ 3.34
RPA1-203ENST00000571058 NACADO15069 1562 aa35.81■■■■□ 3.32
RPA1-203ENST00000571058 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
RPA1-203ENST00000571058 MYO15BQ96JP2 1530 aa35.52■■■■□ 3.28
RPA1-203ENST00000571058 ZCCHC6Q5VYS8 1495 aaKnown RBP35.31■■■■□ 3.24
RPA1-203ENST00000571058 DCAF1Q9Y4B6 1507 aa35.21■■■■□ 3.23
RPA1-203ENST00000571058 UNC13AQ9UPW8 1703 aa35.03■■■■□ 3.2
RPA1-203ENST00000571058 PABPN1Q86U42 306 aaKnown RBP eCLIP34.85■■■■□ 3.17
RPA1-203ENST00000571058 BICRAQ9NZM4 1560 aa34.77■■■■□ 3.16
RPA1-203ENST00000571058 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
RPA1-203ENST00000571058 SHROOM4Q9ULL8 1493 aa34.53■■■■□ 3.12
RPA1-203ENST00000571058 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
RPA1-203ENST00000571058 EIF4G1Q04637 1599 aaKnown RBP33.91■■■■□ 3.02
RPA1-203ENST00000571058 CC2D2AQ9P2K1 1620 aa33.85■■■■□ 3.01
RPA1-203ENST00000571058 CECR2Q9BXF3 1484 aa33.69■■■□□ 2.98
RPA1-203ENST00000571058 SMARCA4P51532 1647 aa33.04■■■□□ 2.88
RPA1-203ENST00000571058 NCAPD3P42695 1498 aa33.02■■■□□ 2.88
RPA1-203ENST00000571058 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
RPA1-203ENST00000571058 ATAD2BQ9ULI0 1458 aa32.95■■■□□ 2.87
RPA1-203ENST00000571058 SMARCA2P51531 1590 aa32.95■■■□□ 2.86
RPA1-203ENST00000571058 HMGXB3Q12766 1538 aa32.84■■■□□ 2.85
RPA1-203ENST00000571058 PEG3Q9GZU2 1588 aa32.77■■■□□ 2.84
RPA1-203ENST00000571058 MROH2BQ7Z745 1585 aa32.69■■■□□ 2.82
RPA1-203ENST00000571058 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
RPA1-203ENST00000571058 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
RPA1-203ENST00000571058 WIZO95785 1651 aa32.31■■■□□ 2.76
RPA1-203ENST00000571058 NESP48681 1621 aa32.23■■■□□ 2.75
RPA1-203ENST00000571058 LAMC3Q9Y6N6 1575 aa32.22■■■□□ 2.75
RPA1-203ENST00000571058 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
RPA1-203ENST00000571058 CUX2O14529 1486 aa32.16■■■□□ 2.74
RPA1-203ENST00000571058 CADPSQ9ULU8 1353 aa32.03■■■□□ 2.72
RPA1-203ENST00000571058 PDS5BQ9NTI5 1447 aa32.02■■■□□ 2.72
RPA1-203ENST00000571058 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
RPA1-203ENST00000571058 THOC2Q8NI27 1593 aaKnown RBP31.88■■■□□ 2.69
RPA1-203ENST00000571058 KIF21AQ7Z4S6 1674 aa31.88■■■□□ 2.69
RPA1-203ENST00000571058 CFTRP13569 1480 aa31.77■■■□□ 2.68
RPA1-203ENST00000571058 MRC2Q9UBG0 1479 aa31.68■■■□□ 2.66
RPA1-203ENST00000571058 CEP164Q9UPV0 1460 aa31.65■■■□□ 2.66
RPA1-203ENST00000571058 FANCD2Q9BXW9 1451 aa31.64■■■□□ 2.66
RPA1-203ENST00000571058 CCDC88BA6NC98 1476 aa31.59■■■□□ 2.65
RPA1-203ENST00000571058 WDR62O43379 1518 aa31.59■■■□□ 2.65
RPA1-203ENST00000571058 DNAJC5Q9H3Z4 198 aa31.54■■■□□ 2.64
RPA1-203ENST00000571058 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
RPA1-203ENST00000571058 URB2Q14146 1524 aaKnown RBP31.31■■■□□ 2.6
RPA1-203ENST00000571058 ABCC8Q09428 1581 aa31.17■■■□□ 2.58
RPA1-203ENST00000571058 TOPBP1Q92547 1522 aa31.08■■■□□ 2.57
RPA1-203ENST00000571058 SUPT5HO00267 1087 aaKnown RBP31.06■■■□□ 2.56
RPA1-203ENST00000571058 DNMBPQ6XZF7 1577 aa31.05■■■□□ 2.56
RPA1-203ENST00000571058 IFT140Q96RY7 1462 aa31.01■■■□□ 2.56
RPA1-203ENST00000571058 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
RPA1-203ENST00000571058 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
RPA1-203ENST00000571058 TARBP1Q13395 1621 aaKnown RBP30.77■■■□□ 2.52
RPA1-203ENST00000571058 OSCARQ8IYS5 282 aa30.74■■■□□ 2.51
RPA1-203ENST00000571058 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
RPA1-203ENST00000571058 CUX1P39880 1505 aa30.7■■■□□ 2.51
RPA1-203ENST00000571058 SOGA1O94964 1423 aa30.68■■■□□ 2.5
RPA1-203ENST00000571058 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
RPA1-203ENST00000571058 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
RPA1-203ENST00000571058 AQRO60306 1485 aaKnown RBP eCLIP30.62■■■□□ 2.49
RPA1-203ENST00000571058 RAD54L2Q9Y4B4 1467 aa30.62■■■□□ 2.49
RPA1-203ENST00000571058 TDRD9Q8NDG6 1382 aaKnown RBP30.51■■■□□ 2.47
RPA1-203ENST00000571058 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
RPA1-203ENST00000571058 CHD1O14646 1710 aa30.4■■■□□ 2.46
RPA1-203ENST00000571058 ABCA10Q8WWZ4 1543 aa30.39■■■□□ 2.46
RPA1-203ENST00000571058 GRIN2BQ13224 1484 aa30.38■■■□□ 2.45
RPA1-203ENST00000571058 TOP2BQ02880 1626 aa30.38■■■□□ 2.45
RPA1-203ENST00000571058 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
RPA1-203ENST00000571058 MAGI1Q96QZ7 1491 aaPredicted RBP30.37■■■□□ 2.45
RPA1-203ENST00000571058 SNAPC4Q5SXM2 1469 aa30.35■■■□□ 2.45
RPA1-203ENST00000571058 FBLN2P98095 1184 aa30.33■■■□□ 2.45
RPA1-203ENST00000571058 GAPVD1Q14C86 1478 aa30.32■■■□□ 2.44
RPA1-203ENST00000571058 SYNJ1O43426 1573 aa30.3■■■□□ 2.44
RPA1-203ENST00000571058 TRIM41Q8WV44 630 aa30.28■■■□□ 2.44
RPA1-203ENST00000571058 ABCA5Q8WWZ7 1642 aa30.28■■■□□ 2.44
RPA1-203ENST00000571058 PBRM1Q86U86 1689 aa30.27■■■□□ 2.44
RPA1-203ENST00000571058 CHMP7Q8WUX9 453 aaPredicted RBP30.24■■■□□ 2.43
RPA1-203ENST00000571058 SYNJ2O15056 1496 aa30.24■■■□□ 2.43
RPA1-203ENST00000571058 RIMBP3CA6NJZ7 1639 aa30.23■■■□□ 2.43
RPA1-203ENST00000571058 RIMBP3BA6NNM3 1639 aa30.23■■■□□ 2.43
RPA1-203ENST00000571058 RIMBP3Q9UFD9 1639 aa30.23■■■□□ 2.43
RPA1-203ENST00000571058 ARHGEF11O15085 1522 aa30.2■■■□□ 2.42
RPA1-203ENST00000571058 CLASP1Q7Z460 1538 aa30.08■■■□□ 2.41
RPA1-203ENST00000571058 ERICH3Q5RHP9 1530 aa30.04■■■□□ 2.4
RPA1-203ENST00000571058 ADAMTS12P58397 1594 aa30.01■■■□□ 2.39
RPA1-203ENST00000571058 FHAD1B1AJZ9 1412 aa29.98■■■□□ 2.39
RPA1-203ENST00000571058 GRIN2AQ12879 1464 aa29.98■■■□□ 2.39
RPA1-203ENST00000571058 CYB5RLQ6IPT4 315 aa29.92■■■□□ 2.38
RPA1-203ENST00000571058 ARAP1Q96P48 1450 aa29.92■■■□□ 2.38
RPA1-203ENST00000571058 NUP160Q12769 1436 aa29.87■■■□□ 2.37
RPA1-203ENST00000571058 KIF27Q86VH2 1401 aa29.82■■■□□ 2.36
RPA1-203ENST00000571058 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
RPA1-203ENST00000571058 IGF1RP08069 1367 aa29.71■■■□□ 2.35
RPA1-203ENST00000571058 CUL7Q14999 1698 aa29.7■■■□□ 2.35
RPA1-203ENST00000571058 SHROOM2Q13796 1616 aa29.68■■■□□ 2.34
RPA1-203ENST00000571058 RUSC2Q8N2Y8 1516 aa29.58■■■□□ 2.33
RPA1-203ENST00000571058 ERCC6L2Q5T890 1561 aa29.56■■■□□ 2.32
RPA1-203ENST00000571058 JPH4Q96JJ6 628 aa29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms