RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 VWFP04275 2813 aa3.78□□□□□ -1.8
SF3B3-213ENST00000569687 TENM1Q9UKZ4 2725 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 TRBV6-8A0A0A6YYG3 113 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 A0A1B0GUV1 79 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 TMEM238C9JI98 176 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 K7ERJ3 54 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 PRYO14603 147 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 NDUFA1O15239 70 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 CFC1BP0CG36 223 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 CFC1P0CG37 223 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 IFITM1P13164 125 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 RPL24P83731 157 aaKnown RBP3.77□□□□□ -1.81
SF3B3-213ENST00000569687 SPANXDQ9BXN6 97 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 SPANXCQ9NY87 97 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 PRO0255Q9UI72 69 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 JMJD1CQ15652 2540 aa3.77□□□□□ -1.81
SF3B3-213ENST00000569687 TRAV8-3A0A0A6YYJ7 113 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.76□□□□□ -1.81
SF3B3-213ENST00000569687 A0A0B4J2C4 111 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 LOC100131303A0A0U1RQF7 123 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 GAGE12HA6NDE8 117 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 USP17L23D6RBM5 183 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 F5H768 121 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 F8W1H4 67 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 UBE2L6O14933 153 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 SPINK8P0C7L1 97 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 MIFP14174 115 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 RNASE13Q5GAN3 156 aaKnown RBP3.76□□□□□ -1.81
SF3B3-213ENST00000569687 MUSTN1Q8IVN3 82 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 C3orf56Q8N813 242 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 ATP6V0E2Q8NHE4 81 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 NAA38Q9BRA0 125 aaKnown RBP3.76□□□□□ -1.81
SF3B3-213ENST00000569687 PRO1854Q9UHT4 67 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 MAST4O15021 2626 aa3.76□□□□□ -1.81
SF3B3-213ENST00000569687 TEP1Q99973 2627 aaKnown RBP3.76□□□□□ -1.81
SF3B3-213ENST00000569687 A4D1N5 150 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 SMIM1B2RUZ4 78 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 DEFB130BP0DP73 79 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 DEFB130AP0DP74 79 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 CIRBPQ14011 172 aaKnown RBP3.75□□□□□ -1.81
SF3B3-213ENST00000569687 OCIAD2Q56VL3 154 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 ADAMTSL4-AS1Q5T5F5 129 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 FAM222AQ5U5X8 452 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 LINC01561Q8N1V8 128 aa3.75□□□□□ -1.81
SF3B3-213ENST00000569687 ZNF625Q96I27 306 aaPredicted RBP3.75□□□□□ -1.81
SF3B3-213ENST00000569687 TRBV20-1A0A075B6N2 111 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 IGHV3-64A0A075B6Q5 118 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 TRAV26-1A0A087WT03 109 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 TRAV13-1A0A0B4J241 112 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 IGHV3OR16-9A0A0B4J2B5 98 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 IGHV4-28A0A0C4DH34 117 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 PAX4O43316 350 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 TSPAN13O95857 204 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 IGHV3-33P01772 117 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 SPART-AS1P0CW21 52 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 HERV-K104P63124 156 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 EGFEM1PQ0D2K5 195 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 GAGE6Q13070 117 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 MIAQ16674 131 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 LYRM7Q5U5X0 104 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 SH2D6Q7Z4S9 175 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 Q8NAQ8 132 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 COPS9Q8WXC6 57 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 PRO0461Q9UI25 63 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 ERG28Q9UKR5 140 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 NBEAL2Q6ZNJ1 2754 aa3.74□□□□□ -1.81
SF3B3-213ENST00000569687 ATRQ13535 2644 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 IGLV4-60A0A075B6I1 120 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 A0A087WZ39 114 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 TEX48A0A1B0GUV7 120 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 K7ERU9 68 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 APOMO95445 188 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 ATP5G1P05496 136 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 PRSS2P07478 247 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 IGHV4-30-4P0DP06 118 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 RBX1P62877 108 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 DEFB135Q30KP9 77 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 LINC01600Q96MT4 127 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 CHCHD5Q9BSY4 110 aa3.73□□□□□ -1.81
SF3B3-213ENST00000569687 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 TRBV30A0A0K0K1B3 111 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 LINC00959A0A1B0GUT2 108 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 G3V4G9 280 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 H3BMG7 143 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 H3BNG1 76 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 M0QXV9 152 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 KRTAP10-11P60412 298 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 DAD1P61803 113 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 WFDC2Q14508 124 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 MRPL23Q16540 153 aaKnown RBP3.72□□□□□ -1.81
SF3B3-213ENST00000569687 SFTA2Q6UW10 78 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 Q9H8V8 135 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 CBY1Q9Y3M2 126 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 NOTCH3Q9UM47 2321 aa3.72□□□□□ -1.81
SF3B3-213ENST00000569687 TMEM262E9PQX1 116 aa3.71□□□□□ -1.82
SF3B3-213ENST00000569687 SS18Q15532 418 aa3.71□□□□□ -1.82
SF3B3-213ENST00000569687 LINC00308Q8TCZ7 52 aa3.71□□□□□ -1.82
SF3B3-213ENST00000569687 COX7B2Q8TF08 81 aa3.71□□□□□ -1.82
SF3B3-213ENST00000569687 LOC107984156A0A0G2JMH3 177 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms