RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MUSTN1Q8IVN3 82 aa12.67□□□□□ -0.38
SMPD3-211ENST00000568373 RNF183Q96D59 192 aa12.67□□□□□ -0.38
SMPD3-211ENST00000568373 IGLV4-60A0A075B6I1 120 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 A4D1N5 150 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 NDUFA1O15239 70 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 F5H768 121 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 PAX4O43316 350 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 TSPAN13O95857 204 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 DAD1P61803 113 aa12.66□□□□□ -0.38
SMPD3-211ENST00000568373 OXLD1Q5BKU9 147 aa12.65□□□□□ -0.38
SMPD3-211ENST00000568373 SPANXDQ9BXN6 97 aa12.65□□□□□ -0.38
SMPD3-211ENST00000568373 SPANXCQ9NY87 97 aa12.65□□□□□ -0.38
SMPD3-211ENST00000568373 ADAMTSL4-AS1Q5T5F5 129 aa12.65□□□□□ -0.39
SMPD3-211ENST00000568373 CELA1Q9UNI1 258 aa12.64□□□□□ -0.39
SMPD3-211ENST00000568373 TIMM17BO60830 172 aa12.63□□□□□ -0.39
SMPD3-211ENST00000568373 PRO1854Q9UHT4 67 aa12.63□□□□□ -0.39
SMPD3-211ENST00000568373 MIAQ16674 131 aa12.63□□□□□ -0.39
SMPD3-211ENST00000568373 C3orf56Q8N813 242 aa12.63□□□□□ -0.39
SMPD3-211ENST00000568373 PRSS2P07478 247 aa12.62□□□□□ -0.39
SMPD3-211ENST00000568373 Q9H8V8 135 aa12.62□□□□□ -0.39
SMPD3-211ENST00000568373 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.61□□□□□ -0.39
SMPD3-211ENST00000568373 A0A0B4J2C4 111 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 ATP5G1P05496 136 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 SPART-AS1P0CW21 52 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 A0A096LPF7 62 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 IGKV3OR2-268A0A0C4DH90 116 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 EIF4EBP3O60516 100 aaPredicted RBP12.61□□□□□ -0.39
SMPD3-211ENST00000568373 KRTAP10-11P60412 298 aa12.61□□□□□ -0.39
SMPD3-211ENST00000568373 SHISA2Q6UWI4 295 aa12.6□□□□□ -0.39
SMPD3-211ENST00000568373 CMYA5Q8N3K9 4069 aa12.59□□□□□ -0.39
SMPD3-211ENST00000568373 A0A1B0GUV1 79 aa12.59□□□□□ -0.39
SMPD3-211ENST00000568373 H3BMG7 143 aa12.59□□□□□ -0.39
SMPD3-211ENST00000568373 TMEM262E9PQX1 116 aa12.58□□□□□ -0.39
SMPD3-211ENST00000568373 EGFEM1PQ0D2K5 195 aa12.58□□□□□ -0.39
SMPD3-211ENST00000568373 CIRBPQ14011 172 aaKnown RBP12.58□□□□□ -0.39
SMPD3-211ENST00000568373 OCIAD2Q56VL3 154 aa12.58□□□□□ -0.39
SMPD3-211ENST00000568373 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.39
SMPD3-211ENST00000568373 TRAV26-1A0A087WT03 109 aa12.58□□□□□ -0.4
SMPD3-211ENST00000568373 LOC107984156A0A0G2JMH3 177 aa12.58□□□□□ -0.4
SMPD3-211ENST00000568373 SFTA2Q6UW10 78 aa12.58□□□□□ -0.4
SMPD3-211ENST00000568373 ARL17AQ8IVW1 177 aa12.58□□□□□ -0.4
SMPD3-211ENST00000568373 IGHV3OR16-9A0A0B4J2B5 98 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 IGHV3-33P01772 117 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 LYRM7Q5U5X0 104 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 PKD1L1Q8TDX9 2849 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 IFITM1P13164 125 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
SMPD3-211ENST00000568373 LINC00959A0A1B0GUT2 108 aa12.56□□□□□ -0.4
SMPD3-211ENST00000568373 NPC2P61916 151 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 HERV-K104P63124 156 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 DAND5Q8N907 189 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 MDFIQ99750 246 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 F8W1H4 67 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 ERG28Q9UKR5 140 aa12.55□□□□□ -0.4
SMPD3-211ENST00000568373 A0A087WZ39 114 aa12.53□□□□□ -0.4
SMPD3-211ENST00000568373 TEX48A0A1B0GUV7 120 aa12.53□□□□□ -0.4
SMPD3-211ENST00000568373 HTN3P15516 51 aa12.53□□□□□ -0.4
SMPD3-211ENST00000568373 COX7B2Q8TF08 81 aa12.53□□□□□ -0.4
SMPD3-211ENST00000568373 ANK2Q01484 3957 aa12.52□□□□□ -0.4
SMPD3-211ENST00000568373 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.4
SMPD3-211ENST00000568373 VPS25Q9BRG1 176 aa12.52□□□□□ -0.4
SMPD3-211ENST00000568373 PSMB2P49721 201 aa12.52□□□□□ -0.41
SMPD3-211ENST00000568373 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
SMPD3-211ENST00000568373 H7C2G1 150 aa12.51□□□□□ -0.41
SMPD3-211ENST00000568373 K7ERU9 68 aa12.51□□□□□ -0.41
SMPD3-211ENST00000568373 SS18Q15532 418 aa12.51□□□□□ -0.41
SMPD3-211ENST00000568373 LINC00308Q8TCZ7 52 aa12.51□□□□□ -0.41
SMPD3-211ENST00000568373 PRO0461Q9UI25 63 aa12.51□□□□□ -0.41
SMPD3-211ENST00000568373 TRBV20-1A0A075B6N2 111 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 WFDC2Q14508 124 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 C5orf38Q86SI9 138 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 RETNQ9HD89 108 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 A0A0U1RRA0 63 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 SH2D6Q7Z4S9 175 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 TOMM7Q9P0U1 55 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 ICOSQ9Y6W8 199 aa12.5□□□□□ -0.41
SMPD3-211ENST00000568373 TCL1BO95988 128 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 SCGB1C2P0DMR2 95 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 Q1RN00 199 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 CLPSL2Q6UWE3 100 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 COPS9Q8WXC6 57 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 XCL1P47992 114 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 MTURNQ8N3F0 131 aa12.49□□□□□ -0.41
SMPD3-211ENST00000568373 DNAH3Q8TD57 4116 aa12.48□□□□□ -0.41
SMPD3-211ENST00000568373 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
SMPD3-211ENST00000568373 LELP1Q5T871 98 aa12.46□□□□□ -0.41
SMPD3-211ENST00000568373 SOSTDC1Q6X4U4 206 aa12.46□□□□□ -0.41
SMPD3-211ENST00000568373 TRBV30A0A0K0K1B3 111 aa12.46□□□□□ -0.42
SMPD3-211ENST00000568373 G3V4G9 280 aa12.46□□□□□ -0.42
SMPD3-211ENST00000568373 Q8N3U1 123 aa12.46□□□□□ -0.42
SMPD3-211ENST00000568373 ANGP03950 147 aaKnown RBP12.45□□□□□ -0.42
SMPD3-211ENST00000568373 PPDPFQ9H3Y8 114 aa12.45□□□□□ -0.42
SMPD3-211ENST00000568373 LINC01561Q8N1V8 128 aa12.44□□□□□ -0.42
SMPD3-211ENST00000568373 C11orf68Q9H3H3 251 aaKnown RBP12.44□□□□□ -0.42
SMPD3-211ENST00000568373 TRIAP1O43715 76 aa12.43□□□□□ -0.42
SMPD3-211ENST00000568373 REG3AQ06141 175 aa12.43□□□□□ -0.42
SMPD3-211ENST00000568373 RPL13AP40429 203 aaKnown RBP12.42□□□□□ -0.42
SMPD3-211ENST00000568373 ETDBQ3ZM63 59 aa12.42□□□□□ -0.42
SMPD3-211ENST00000568373 SMCPP49901 116 aaPredicted RBP12.42□□□□□ -0.42
SMPD3-211ENST00000568373 CD164L2Q6UWJ8 174 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms