RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 PLEKHB2Q96CS7 222 aa4.9□□□□□ -1.62
SMG1-215ENST00000568239 LEPROTO15243 131 aa4.9□□□□□ -1.63
SMG1-215ENST00000568239 RBX1P62877 108 aa4.9□□□□□ -1.63
SMG1-215ENST00000568239 HERVK_113P63121 156 aa4.9□□□□□ -1.63
SMG1-215ENST00000568239 SEC11AP67812 179 aa4.9□□□□□ -1.63
SMG1-215ENST00000568239 SRSF9Q13242 221 aaKnown RBP eCLIP4.9□□□□□ -1.63
SMG1-215ENST00000568239 C11orf68Q9H3H3 251 aaKnown RBP4.9□□□□□ -1.63
SMG1-215ENST00000568239 HIGD1BQ9P298 99 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 DEFB131BA0A096LNP1 70 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 IGHV1-58A0A0C4DH39 117 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 K7EP13 123 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 TIRAPP58753 221 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 KPRPQ5T749 579 aaPredicted RBP4.89□□□□□ -1.63
SMG1-215ENST00000568239 Q8N3U1 123 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 ORAOV1Q8WV07 137 aa4.89□□□□□ -1.63
SMG1-215ENST00000568239 ANGP03950 147 aaKnown RBP4.89□□□□□ -1.63
SMG1-215ENST00000568239 FXYD2P54710 66 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 SH2D6Q7Z4S9 175 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 CEND1Q8N111 149 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 LINC00269Q8N2A0 174 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 RAB37Q96AX2 223 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 TM2D3Q9BRN9 247 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 NDUFA12Q9UI09 145 aa4.88□□□□□ -1.63
SMG1-215ENST00000568239 DNAH3Q8TD57 4116 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 A6NDN8 102 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 XCL1P47992 114 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 IGLV10-54A0A075B6I4 117 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 IGLV5-45A0A087WSX0 123 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 A0A1B0GUV1 79 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 LELP1Q5T871 98 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 C5orf38Q86SI9 138 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 ZNF625Q96I27 306 aaPredicted RBP4.87□□□□□ -1.63
SMG1-215ENST00000568239 NHP2Q9NX24 153 aaKnown RBP4.87□□□□□ -1.63
SMG1-215ENST00000568239 TOMM7Q9P0U1 55 aa4.87□□□□□ -1.63
SMG1-215ENST00000568239 LINC00959A0A1B0GUT2 108 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 SS18Q15532 418 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 STAB2Q8WWQ8 2551 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 SMIM1B2RUZ4 78 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 K7ERJ3 54 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 CCL25O15444 150 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 IGHV3-30P01768 117 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 IGHV3-33P01772 117 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 IGHV3-30-5P0DP03 117 aa4.86□□□□□ -1.63
SMG1-215ENST00000568239 NAA38Q9BRA0 125 aaKnown RBP4.86□□□□□ -1.63
SMG1-215ENST00000568239 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 A0A0U1RRA0 63 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 TAX1BP3O14907 124 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 PRSS2P07478 247 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 REG3AQ06141 175 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 TAL2Q16559 108 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 TM2D2Q9BX73 214 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 Q9H8V8 135 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 HUWE1Q7Z6Z7 4374 aaKnown RBP4.85□□□□□ -1.63
SMG1-215ENST00000568239 SMIM13P0DJ93 91 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 NPC2P61916 151 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 ZFAND6Q6FIF0 208 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 FAM19A3Q7Z5A8 133 aa4.85□□□□□ -1.63
SMG1-215ENST00000568239 IGHV3OR16-9A0A0B4J2B5 98 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 H3BNG1 76 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 COX11Q9Y6N1 276 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 TRAV10A0A0B4J240 114 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 TMEM238C9JI98 176 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 VAMP3Q15836 100 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 ESRGQ1W209 222 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 WFDC10BQ8IUB3 73 aa4.84□□□□□ -1.63
SMG1-215ENST00000568239 IGLV5-39A0A0G2JS06 123 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 APOMO95445 188 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 TNP2Q05952 138 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 DAND5Q8N907 189 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 CHCHD10Q8WYQ3 142 aaPredicted RBP4.83□□□□□ -1.64
SMG1-215ENST00000568239 IGLL5B9A064 214 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 H3BUT2 72 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 MEIG1Q5JSS6 88 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 UBE2WQ96B02 151 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 COL7A1Q02388 2944 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 NDUFA1O15239 70 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 CRPP02741 224 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 MALP21145 153 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 COX7B2Q8TF08 81 aa4.83□□□□□ -1.64
SMG1-215ENST00000568239 SPANXB1Q9NS25 103 aaPredicted RBP4.83□□□□□ -1.64
SMG1-215ENST00000568239 A0A087WZ39 114 aa4.82□□□□□ -1.64
SMG1-215ENST00000568239 CIRBPQ14011 172 aaKnown RBP4.82□□□□□ -1.64
SMG1-215ENST00000568239 ADAMTSL4-AS1Q5T5F5 129 aa4.82□□□□□ -1.64
SMG1-215ENST00000568239 MUSTN1Q8IVN3 82 aa4.82□□□□□ -1.64
SMG1-215ENST00000568239 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
SMG1-215ENST00000568239 COX7A2LO14548 114 aa4.81□□□□□ -1.64
SMG1-215ENST00000568239 CD164L2Q6UWJ8 174 aa4.81□□□□□ -1.64
SMG1-215ENST00000568239 DNHD1Q96M86 4753 aa4.81□□□□□ -1.64
SMG1-215ENST00000568239 C9orf118A6NHY6 69 aa4.81□□□□□ -1.64
SMG1-215ENST00000568239 ZNF561-AS1K7EIQ3 104 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
SMG1-215ENST00000568239 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 LITAFQ99732 161 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 B9D2Q9BPU9 175 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 GAGE12HA6NDE8 117 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 ENHOQ6UWT2 76 aa4.8□□□□□ -1.64
SMG1-215ENST00000568239 GHRHP01286 108 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 259.4 ms