RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 WFDC10BQ8IUB3 73 aa12.1□□□□□ -0.47
HERC2-208ENST00000566635 NMUP48645 174 aa12.1□□□□□ -0.47
HERC2-208ENST00000566635 TINCRA0A1B0GVN0 87 aa12.09□□□□□ -0.47
HERC2-208ENST00000566635 COX8AP10176 69 aa12.09□□□□□ -0.47
HERC2-208ENST00000566635 COX6A2Q02221 97 aa12.09□□□□□ -0.47
HERC2-208ENST00000566635 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
HERC2-208ENST00000566635 C2orf91Q6ZV80 131 aa12.08□□□□□ -0.48
HERC2-208ENST00000566635 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
HERC2-208ENST00000566635 GEMIN7Q9H840 131 aaKnown RBP12.07□□□□□ -0.48
HERC2-208ENST00000566635 ANGP03950 147 aaKnown RBP12.07□□□□□ -0.48
HERC2-208ENST00000566635 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
HERC2-208ENST00000566635 PCP2Q8IVA1 136 aa12.07□□□□□ -0.48
HERC2-208ENST00000566635 GTF2H5Q6ZYL4 71 aa12.06□□□□□ -0.48
HERC2-208ENST00000566635 LINC00269Q8N2A0 174 aa12.06□□□□□ -0.48
HERC2-208ENST00000566635 TMEM223A0PJW6 202 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 IGHV3-30P01768 117 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 IGHV3-33P01772 117 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 IGHV3-30-3P0DP02 117 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 IGHV3-30-5P0DP03 117 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 CDKN2A-AS1Q9UH64 79 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 IGHV3-64A0A075B6Q5 118 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 GAGE10A6NGK3 116 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 E9PLD3 99 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 H3BRM9 83 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 LYSTQ99698 3801 aa12.05□□□□□ -0.48
HERC2-208ENST00000566635 LINC00959A0A1B0GUT2 108 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 HERVK_113P61574 105 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 IGLV5-45A0A087WSX0 123 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 C9orf118A6NHY6 69 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 HERVK_113P63121 156 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 LINC00588Q9Y4M8 146 aa12.04□□□□□ -0.48
HERC2-208ENST00000566635 PLECQ15149 4684 aaKnown RBP12.03□□□□□ -0.48
HERC2-208ENST00000566635 SPINK8P0C7L1 97 aa12.03□□□□□ -0.48
HERC2-208ENST00000566635 STARD9Q9P2P6 4700 aa12.03□□□□□ -0.48
HERC2-208ENST00000566635 TSPEAR-AS2P59090 65 aa12.02□□□□□ -0.48
HERC2-208ENST00000566635 REG3AQ06141 175 aa12.02□□□□□ -0.48
HERC2-208ENST00000566635 KLK12Q9UKR0 248 aa12.02□□□□□ -0.48
HERC2-208ENST00000566635 TRAV8-3A0A0A6YYJ7 113 aa12.02□□□□□ -0.49
HERC2-208ENST00000566635 K7EP34 96 aa12.02□□□□□ -0.49
HERC2-208ENST00000566635 A6NDN8 102 aa12.01□□□□□ -0.49
HERC2-208ENST00000566635 BOD1L2Q8IYS8 172 aa12.01□□□□□ -0.49
HERC2-208ENST00000566635 MAPKAPK5-AS1Q8N8E1 139 aa12.01□□□□□ -0.49
HERC2-208ENST00000566635 SIVA1O15304 175 aa12□□□□□ -0.49
HERC2-208ENST00000566635 IGLV10-54A0A075B6I4 117 aa11.99□□□□□ -0.49
HERC2-208ENST00000566635 XCL1P47992 114 aa11.99□□□□□ -0.49
HERC2-208ENST00000566635 CCL18P55774 89 aa11.99□□□□□ -0.49
HERC2-208ENST00000566635 APLNQ9ULZ1 77 aa11.99□□□□□ -0.49
HERC2-208ENST00000566635 SS18Q15532 418 aa11.99□□□□□ -0.49
HERC2-208ENST00000566635 NUPR2A6NF83 97 aa11.98□□□□□ -0.49
HERC2-208ENST00000566635 LEPROTO15243 131 aa11.98□□□□□ -0.49
HERC2-208ENST00000566635 PRR34Q9NV39 138 aa11.98□□□□□ -0.49
HERC2-208ENST00000566635 LINC01556Q5JQF7 62 aa11.98□□□□□ -0.49
HERC2-208ENST00000566635 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
HERC2-208ENST00000566635 TGP01266 2768 aa11.97□□□□□ -0.49
HERC2-208ENST00000566635 IGHV3OR16-9A0A0B4J2B5 98 aa11.97□□□□□ -0.49
HERC2-208ENST00000566635 IGHV1-58A0A0C4DH39 117 aa11.97□□□□□ -0.49
HERC2-208ENST00000566635 J3QQQ9 107 aa11.97□□□□□ -0.49
HERC2-208ENST00000566635 HSD52Q0P140 79 aa11.97□□□□□ -0.49
HERC2-208ENST00000566635 SMIM1B2RUZ4 78 aa11.96□□□□□ -0.49
HERC2-208ENST00000566635 CHCHD10Q8WYQ3 142 aaPredicted RBP11.96□□□□□ -0.49
HERC2-208ENST00000566635 UBE2WQ96B02 151 aa11.96□□□□□ -0.49
HERC2-208ENST00000566635 ZNF815PA8K554 130 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 CRPP02741 224 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 DNAH10OSP0CZ25 163 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 SCGB1A1P11684 91 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 C5orf38Q86SI9 138 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 MYMXA0A1B0GTQ4 84 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 LGALS3P17931 250 aaKnown RBP11.95□□□□□ -0.5
HERC2-208ENST00000566635 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
HERC2-208ENST00000566635 DNAH1Q9P2D7 4330 aa11.94□□□□□ -0.5
HERC2-208ENST00000566635 IGLV5-39A0A0G2JS06 123 aa11.94□□□□□ -0.5
HERC2-208ENST00000566635 ZFAND6Q6FIF0 208 aa11.94□□□□□ -0.5
HERC2-208ENST00000566635 KLK5Q9Y337 293 aaPredicted RBP11.94□□□□□ -0.5
HERC2-208ENST00000566635 H3BUT2 72 aa11.93□□□□□ -0.5
HERC2-208ENST00000566635 UPK3BQ9BT76 320 aa11.93□□□□□ -0.5
HERC2-208ENST00000566635 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
HERC2-208ENST00000566635 A0A087WZ39 114 aa11.92□□□□□ -0.5
HERC2-208ENST00000566635 CD164L2Q6UWJ8 174 aa11.92□□□□□ -0.5
HERC2-208ENST00000566635 GAGE12HA6NDE8 117 aa11.9□□□□□ -0.5
HERC2-208ENST00000566635 FOXI1Q12951 378 aa11.9□□□□□ -0.5
HERC2-208ENST00000566635 UBE2DNLQ8IWF7 75 aa11.9□□□□□ -0.5
HERC2-208ENST00000566635 SVIPQ8NHG7 77 aa11.9□□□□□ -0.5
HERC2-208ENST00000566635 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.5
HERC2-208ENST00000566635 MIAQ16674 131 aa11.89□□□□□ -0.51
HERC2-208ENST00000566635 Q9H8V8 135 aa11.89□□□□□ -0.51
HERC2-208ENST00000566635 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
HERC2-208ENST00000566635 COX7A2LO14548 114 aa11.88□□□□□ -0.51
HERC2-208ENST00000566635 SCGB1D4Q6XE38 83 aa11.88□□□□□ -0.51
HERC2-208ENST00000566635 C10orf126Q8N4M7 172 aa11.88□□□□□ -0.51
HERC2-208ENST00000566635 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
HERC2-208ENST00000566635 FABP2P12104 132 aa11.87□□□□□ -0.51
HERC2-208ENST00000566635 TOMM7Q9P0U1 55 aa11.87□□□□□ -0.51
HERC2-208ENST00000566635 Q9HAA7 133 aa11.87□□□□□ -0.51
HERC2-208ENST00000566635 HIGD1BQ9P298 99 aa11.87□□□□□ -0.51
HERC2-208ENST00000566635 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
HERC2-208ENST00000566635 KRTAP26-1Q6PEX3 210 aa11.86□□□□□ -0.51
HERC2-208ENST00000566635 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
HERC2-208ENST00000566635 MUC7Q8TAX7 377 aa11.85□□□□□ -0.51
HERC2-208ENST00000566635 NDUFA1O15239 70 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms