RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 GUCA1AP43080 201 aaPredicted RBP-0.4□□□□□ -2.47
CHD9-207ENST00000562806 LZICQ8WZA0 190 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 LSM10Q969L4 123 aaKnown RBP-0.4□□□□□ -2.47
CHD9-207ENST00000562806 DPH3Q96FX2 82 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 COPZ2Q9P299 210 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 DMXL2Q8TDJ6 3036 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 KIF21AQ7Z4S6 1674 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 DNAH8Q96JB1 4490 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 ERCC6L2Q5T890 1561 aa-0.4□□□□□ -2.47
CHD9-207ENST00000562806 EYSQ5T1H1 3165 aa-0.41□□□□□ -2.47
CHD9-207ENST00000562806 ACACAQ13085 2346 aa-0.41□□□□□ -2.47
CHD9-207ENST00000562806 LYSTQ99698 3801 aa-0.41□□□□□ -2.47
CHD9-207ENST00000562806 DNAH17Q9UFH2 4485 aa-0.41□□□□□ -2.47
CHD9-207ENST00000562806 M0R135 149 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 COPZ1P61923 177 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 Q8N8P6 123 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 SMIM4Q8WVI0 70 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 LINC00472Q9H8W2 130 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 R4GMQ9 66 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.41□□□□□ -2.485e-6■■■■□ 23.8
CHD9-207ENST00000562806 TRANK1O15050 2925 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 TRRAPQ9Y4A5 3859 aa-0.41□□□□□ -2.48
CHD9-207ENST00000562806 SHROOM2Q13796 1616 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 ZFHX3Q15911 3703 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 RIMS1Q86UR5 1692 aaKnown RBP-0.42□□□□□ -2.48
CHD9-207ENST00000562806 SPENQ96T58 3664 aaKnown RBP-0.42□□□□□ -2.48
CHD9-207ENST00000562806 TRAV13-2A0A0B4J235 113 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 CTXND1A0A1B0GTU2 59 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 MT1AP04731 61 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 HIST1H1DP16402 221 aaKnown RBP-0.42□□□□□ -2.48
CHD9-207ENST00000562806 KRTAP20-1Q3LI63 56 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 KCNRGQ8N5I3 272 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 MAFIPQ8WZ33 124 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 SPRR2FQ96RM1 72 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 AMELXQ99217 191 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 TMEM191AQ9H0A3 160 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 TP53AIP1Q9HCN2 124 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 ZFHX4Q86UP3 3567 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 ATMQ13315 3056 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 USF3Q68DE3 2245 aa-0.42□□□□□ -2.48
CHD9-207ENST00000562806 C5orf42Q9H799 3197 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 TSC2P49815 1807 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 DOCK2Q92608 1830 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 BOD1L1Q8NFC6 3051 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 BPTFQ12830 3046 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 PIGBOS1A0A0B4J2F0 54 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 MT1HP80294 61 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 DCDP81605 110 aaKnown RBP-0.43□□□□□ -2.48
CHD9-207ENST00000562806 C10orf128Q5T292 105 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 LENEPQ9Y5L5 61 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 CFTRP13569 1480 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 FOCADQ5VW36 1801 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 SBF2Q86WG5 1849 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 KNL1Q8NG31 2342 aa-0.43□□□□□ -2.48
CHD9-207ENST00000562806 KDM5AP29375 1690 aaKnown RBP-0.43□□□□□ -2.48
CHD9-207ENST00000562806 ADGRG4Q8IZF6 3080 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 ARHGEF5Q12774 1597 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 ACACBO00763 2458 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 FXYD6-FXYD2A0A087WZ82 144 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 SMCO1Q147U7 214 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 SPAG11AQ6PDA7 123 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 TTC9CQ8N5M4 171 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 TCEAL4Q96EI5 215 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 AQP10Q96PS8 301 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 PDCD10Q9BUL8 212 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 NDUFA4L2Q9NRX3 87 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 V9GYH0 126 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 DNAH10Q8IVF4 4471 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 SPTBN5Q9NRC6 3674 aaKnown RBP-0.44□□□□□ -2.48
CHD9-207ENST00000562806 MYO9AB2RTY4 2548 aa-0.44□□□□□ -2.48
CHD9-207ENST00000562806 FAM186AA6NE01 2351 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 PPIP5K1Q6PFW1 1433 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 QRICH2Q9H0J4 1663 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 ROBO1Q9Y6N7 1651 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 MBD5Q9P267 1494 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 TRBV6-1A0A0K0K1D8 114 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 K7EQZ3 153 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 MT1HL1P0DM35 61 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 COX17Q14061 63 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 KLK9Q2XQG4 91 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 Q6AWC8 147 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 Q6JHZ5 121 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 TSLPQ969D9 159 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 CCDC167Q9P0B6 97 aa-0.45□□□□□ -2.48
CHD9-207ENST00000562806 PRUNE2Q8WUY3 3088 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 NSD3Q9BZ95 1437 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 DNAJC13O75165 2243 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 CEP290O15078 2479 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 SPRR1BP22528 89 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 ARPC4P59998 168 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 MT1XP80297 61 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 PIGYQ3MUY2 71 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 SERP1Q9Y6X1 66 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 PLCE1Q9P212 2302 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 MYO15AQ9UKN7 3530 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 MYOM1P52179 1685 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 TRIOO75962 3097 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 TLN2Q9Y4G6 2542 aa-0.46□□□□□ -2.48
CHD9-207ENST00000562806 PDE4DIPQ5VU43 2346 aa-0.47□□□□□ -2.48
CHD9-207ENST00000562806 WDR7Q9Y4E6 1490 aa-0.47□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms