RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 TRBV20-1A0A075B6N2 111 aa7.21□□□□□ -1.26
TPM1-212ENST00000558347 H3BMG7 143 aa7.21□□□□□ -1.26
TPM1-212ENST00000558347 TSPAN13O95857 204 aa7.21□□□□□ -1.26
TPM1-212ENST00000558347 WFDC2Q14508 124 aa7.21□□□□□ -1.26
TPM1-212ENST00000558347 SPANXA1Q9NS26 97 aa7.21□□□□□ -1.26
TPM1-212ENST00000558347 RS1O15537 224 aa7.2□□□□□ -1.26
TPM1-212ENST00000558347 HTN3P15516 51 aa7.2□□□□□ -1.26
TPM1-212ENST00000558347 MRPS36P82909 103 aaKnown RBP7.2□□□□□ -1.26
TPM1-212ENST00000558347 TNFRSF18Q9Y5U5 241 aa7.2□□□□□ -1.26
TPM1-212ENST00000558347 TMEM238C9JI98 176 aa7.19□□□□□ -1.26
TPM1-212ENST00000558347 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
TPM1-212ENST00000558347 DAD1P61803 113 aa7.19□□□□□ -1.26
TPM1-212ENST00000558347 C10orf126Q8N4M7 172 aa7.19□□□□□ -1.26
TPM1-212ENST00000558347 LINC00612Q8N6U2 182 aa7.19□□□□□ -1.26
TPM1-212ENST00000558347 NOP10Q9NPE3 64 aaKnown RBP7.19□□□□□ -1.26
TPM1-212ENST00000558347 PKD1P98161 4303 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 TRGV1A0A0A0MS02 117 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 A0A0B4J2C4 111 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 LYRM9A8MSI8 78 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 CIDEAO60543 219 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 CFC1BP0CG36 223 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 CFC1P0CG37 223 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 CFAP126Q5VTH2 177 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 Q6ZTI0 123 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 PRO1854Q9UHT4 67 aa7.18□□□□□ -1.26
TPM1-212ENST00000558347 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.17□□□□□ -1.26
TPM1-212ENST00000558347 TRAV4A0A0B4J268 109 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 TINCRA0A1B0GVN0 87 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 APOMO95445 188 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 IGHV3-53P01767 116 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 A0A0J9YXV3 536 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 M0QXV9 152 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 DEFB130BP0DP73 79 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 DEFB130AP0DP74 79 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 OPRPNQ99935 248 aaPredicted RBP7.17□□□□□ -1.26
TPM1-212ENST00000558347 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
TPM1-212ENST00000558347 HERC2O95714 4834 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 PKHD1P08F94 4074 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 LOC107984156A0A0G2JMH3 177 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 ETDBQ3ZM63 59 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 ARL17AQ8IVW1 177 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 DEFB104AQ8WTQ1 72 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 FAM104AQ969W3 186 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 CHCHD7Q9BUK0 85 aa7.16□□□□□ -1.26
TPM1-212ENST00000558347 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 IGHV1-58A0A0C4DH39 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 GAGE7O76087 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 GAGE12FP0CL80 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 GAGE12GP0CL81 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 GAGE12IP0CL82 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 PSMB2P49721 201 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 SH2D6Q7Z4S9 175 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 SIGMAR1Q99720 223 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 SPANXDQ9BXN6 97 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 SPANXCQ9NY87 97 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 UBE2D4Q9Y2X8 147 aa7.15□□□□□ -1.27
TPM1-212ENST00000558347 DYNC1H1Q14204 4646 aaKnown RBP7.14□□□□□ -1.27
TPM1-212ENST00000558347 TRGV2A0A075B6R0 118 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 A4D1N5 150 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 GAGE12HA6NDE8 117 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 M0R2N4 97 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 TIMM17BO60830 172 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 IGHV3-33P01772 117 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 TIRAPP58753 221 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 UBE2DNLQ8IWF7 75 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 DNAH11Q96DT5 4516 aa7.14□□□□□ -1.27
TPM1-212ENST00000558347 IGHV3-73A0A0B4J1V6 119 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 F5H768 121 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 ATP5G1P05496 136 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
TPM1-212ENST00000558347 SMAGPQ0VAQ4 97 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 FOXI1Q12951 378 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 Q6ZSN1 163 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 VSIG2Q96IQ7 327 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 ERG28Q9UKR5 140 aa7.13□□□□□ -1.27
TPM1-212ENST00000558347 IGLV5-45A0A087WSX0 123 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 TRBV10-1A0A0K0K1A3 114 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 TCL1BO95988 128 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 FAM19A3Q7Z5A8 133 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 TEN1Q86WV5 123 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 MUSTN1Q8IVN3 82 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 PPDPFLQ8WWR9 84 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 LINC01600Q96MT4 127 aa7.12□□□□□ -1.27
TPM1-212ENST00000558347 IFITM1P13164 125 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 LITAFQ99732 161 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 TRBV30A0A0K0K1B3 111 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 RTL8CO15255 209 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 SCGB1C2P0DMR2 95 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 FHL2Q14192 279 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 MIAQ16674 131 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 Q6ZR54 194 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 Q6ZUT4 128 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 GEMIN7Q9H840 131 aaKnown RBP7.11□□□□□ -1.27
TPM1-212ENST00000558347 NDUFA12Q9UI09 145 aa7.11□□□□□ -1.27
TPM1-212ENST00000558347 CSDC2Q9Y534 153 aaKnown RBP7.11□□□□□ -1.27
TPM1-212ENST00000558347 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms