RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 TRAV8-3A0A0A6YYJ7 113 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 TRBV6-4A0A1B0GX49 114 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 ADARB2-AS1A8MUL3 147 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 H0YGX0 51 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 H3BS24 57 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 H7C2G1 150 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 K7EQD1 137 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 DEFB1P60022 68 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 CXCL6P80162 114 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 DEFB114Q30KQ6 69 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 ATP11AUNQ6ZP68 121 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 Q6ZVQ6 151 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 ESM1Q9NQ30 184 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 AKAP13Q12802 2813 aa3.95□□□□□ -1.78
GABPB1-207ENST00000558335 MUC6Q6W4X9 2439 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 ZZEF1O43149 2961 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 H3BQ85 93 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 M0R378 163 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 IGHV4-31P0DP07 118 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 HTN1P15515 57 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 DEFB113Q30KQ7 82 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 C11orf72Q8NBR9 251 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 MUC7Q8TAX7 377 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 LINC00308Q8TCZ7 52 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 LITAFQ99732 161 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 SPTA1P02549 2419 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 COL6A3P12111 3177 aa3.94□□□□□ -1.78
GABPB1-207ENST00000558335 CELSR3Q9NYQ7 3312 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 IGHV3-64A0A075B6Q5 118 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 A0A096LNT2 108 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 TRGV1A0A0A0MS02 117 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 SPRY2O43597 315 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 CRPP02741 224 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 HIST2H2BCQ6DN03 193 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 HIST2H2BDQ6DRA6 164 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 LCA10Q71F78 164 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 OBSCN-AS1Q96MR7 158 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 WDFY4Q6ZS81 3184 aa3.93□□□□□ -1.78
GABPB1-207ENST00000558335 SPTBN2O15020 2390 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 PRRC2AP48634 2157 aaKnown RBP3.92□□□□□ -1.78
GABPB1-207ENST00000558335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-207ENST00000558335 A0A087X002 238 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-207ENST00000558335 JMJD7-PLA2G4BH0Y9G9 81 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 RPL28P46779 137 aaKnown RBP3.92□□□□□ -1.78
GABPB1-207ENST00000558335 SLURP1P55000 103 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 C6orf223Q8N319 242 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
GABPB1-207ENST00000558335 Q9H8V8 135 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 CDC42SE2Q9NRR3 84 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 CDKN2A-AS1Q9UH64 79 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 LINC00588Q9Y4M8 146 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 LOC400499M0QZD8 3231 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 ZFHX4Q86UP3 3567 aa3.92□□□□□ -1.78
GABPB1-207ENST00000558335 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.92□□□□□ -1.784e-7■■■■□ 26.6
GABPB1-207ENST00000558335 ABCA2Q9BZC7 2435 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 TRGV2A0A075B6R0 118 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 IGHV3-73A0A0B4J1V6 119 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 SMIM1B2RUZ4 78 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 F8WEM9 126 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 CCL24O00175 119 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 MIFP14174 115 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 UBE2AP49459 152 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 SS18Q15532 418 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 LINC00242Q5T6M2 205 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 C11orf45Q8TAV5 145 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 COX7B2Q8TF08 81 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 UBL5Q9BZL1 73 aa3.91□□□□□ -1.78
GABPB1-207ENST00000558335 MGAQ8IWI9 3026 aa3.9□□□□□ -1.78
GABPB1-207ENST00000558335 SPTBN1Q01082 2364 aaKnown RBP3.9□□□□□ -1.78
GABPB1-207ENST00000558335 COL6A6A6NMZ7 2263 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 IGHV3OR16-12A0A075B7B8 117 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 TRGV4A0A0C4DH28 118 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 C8orf87E5RJ46 101 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 ZNF73O43830 326 aaPredicted RBP3.9□□□□□ -1.79
GABPB1-207ENST00000558335 COX17Q14061 63 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 ADAMTSL4-AS1Q5T5F5 129 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 ZNF625Q96I27 306 aaPredicted RBP3.9□□□□□ -1.79
GABPB1-207ENST00000558335 CYP4F30PQ9H0H9 118 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 LINC00474Q9P2X8 69 aa3.9□□□□□ -1.79
GABPB1-207ENST00000558335 HRNRQ86YZ3 2850 aaPredicted RBP3.89□□□□□ -1.79
GABPB1-207ENST00000558335 CEP295Q9C0D2 2601 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 IGKV3D-7A0A0C4DH55 119 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 TMEM256-PLSCR3K7ERE1 68 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 FUSP35637 526 aaKnown RBP eCLIP3.89□□□□□ -1.79
GABPB1-207ENST00000558335 ODF3L2Q3SX64 289 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 ASB16-AS1Q495Z4 193 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 C7orf65Q6ZTY9 151 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 SPATA3Q8NHX4 192 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 FAM104AQ969W3 186 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 KALRNO60229 2985 aa3.89□□□□□ -1.79
GABPB1-207ENST00000558335 BSNQ9UPA5 3926 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 BOD1L1Q8NFC6 3051 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 A0A087WZ39 114 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 TRBV6-8A0A0A6YYG3 113 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 IGHV3-38A0A0C4DH36 116 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 LOC100131303A0A0U1RQF7 123 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
GABPB1-207ENST00000558335 RNASE1P07998 156 aaKnown RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms