RNA–Protein interactions for RNA: ENST00000557258.5

FOXN3-214, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-214ENST00000557258 SMIM1B2RUZ4 78 aa13.57□□□□□ -0.24
FOXN3-214ENST00000557258 PKD1L1Q8TDX9 2849 aa13.57□□□□□ -0.24
FOXN3-214ENST00000557258 TIRAPP58753 221 aa13.57□□□□□ -0.24
FOXN3-214ENST00000557258 HERVK_113P63121 156 aa13.57□□□□□ -0.24
FOXN3-214ENST00000557258 TRBV6-4A0A1B0GX49 114 aa13.57□□□□□ -0.24
FOXN3-214ENST00000557258 IGLV5-45A0A087WSX0 123 aa13.56□□□□□ -0.24
FOXN3-214ENST00000557258 MIAQ16674 131 aa13.56□□□□□ -0.24
FOXN3-214ENST00000557258 STAB1Q9NY15 2570 aa13.54□□□□□ -0.24
FOXN3-214ENST00000557258 CLPSL2Q6UWE3 100 aa13.54□□□□□ -0.24
FOXN3-214ENST00000557258 TOMM7Q9P0U1 55 aa13.54□□□□□ -0.24
FOXN3-214ENST00000557258 X6R8D5 127 aa13.54□□□□□ -0.24
FOXN3-214ENST00000557258 A0A0B4J2C4 111 aa13.54□□□□□ -0.24
FOXN3-214ENST00000557258 GYPEP15421 78 aa13.53□□□□□ -0.24
FOXN3-214ENST00000557258 PRIMA1Q86XR5 153 aa13.53□□□□□ -0.24
FOXN3-214ENST00000557258 NDUFA1O15239 70 aa13.53□□□□□ -0.24
FOXN3-214ENST00000557258 TRIAP1O43715 76 aa13.53□□□□□ -0.24
FOXN3-214ENST00000557258 TRBV6-8A0A0A6YYG3 113 aa13.52□□□□□ -0.24
FOXN3-214ENST00000557258 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.52□□□□□ -0.24
FOXN3-214ENST00000557258 IGLV5-39A0A0G2JS06 123 aa13.52□□□□□ -0.25
FOXN3-214ENST00000557258 F5H768 121 aa13.52□□□□□ -0.25
FOXN3-214ENST00000557258 MEIG1Q5JSS6 88 aa13.52□□□□□ -0.25
FOXN3-214ENST00000557258 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
FOXN3-214ENST00000557258 CSDC2Q9Y534 153 aaKnown RBP13.52□□□□□ -0.25
FOXN3-214ENST00000557258 C9JAW5 83 aa13.51□□□□□ -0.25
FOXN3-214ENST00000557258 SPANXDQ9BXN6 97 aa13.51□□□□□ -0.25
FOXN3-214ENST00000557258 SPANXCQ9NY87 97 aa13.51□□□□□ -0.25
FOXN3-214ENST00000557258 GTSF1LQ9H1H1 148 aa13.51□□□□□ -0.25
FOXN3-214ENST00000557258 TMEM262E9PQX1 116 aa13.5□□□□□ -0.25
FOXN3-214ENST00000557258 C11orf68Q9H3H3 251 aaKnown RBP13.5□□□□□ -0.25
FOXN3-214ENST00000557258 LYRM7Q5U5X0 104 aa13.49□□□□□ -0.25
FOXN3-214ENST00000557258 SOSTDC1Q6X4U4 206 aa13.48□□□□□ -0.25
FOXN3-214ENST00000557258 C5orf38Q86SI9 138 aa13.48□□□□□ -0.25
FOXN3-214ENST00000557258 Q8N3U1 123 aa13.48□□□□□ -0.25
FOXN3-214ENST00000557258 RPL13AP40429 203 aaKnown RBP13.48□□□□□ -0.25
FOXN3-214ENST00000557258 CLEC2BQ92478 149 aa13.48□□□□□ -0.25
FOXN3-214ENST00000557258 FBN1P35555 2871 aaKnown RBP13.48□□□□□ -0.25
FOXN3-214ENST00000557258 MAST4O15021 2626 aa13.48□□□□□ -0.25
FOXN3-214ENST00000557258 TRBV20-1A0A075B6N2 111 aa13.47□□□□□ -0.25
FOXN3-214ENST00000557258 C9orf66Q5T8R8 295 aa13.47□□□□□ -0.25
FOXN3-214ENST00000557258 LINC00308Q8TCZ7 52 aa13.47□□□□□ -0.25
FOXN3-214ENST00000557258 ANK2Q01484 3957 aa13.46□□□□□ -0.25
FOXN3-214ENST00000557258 FOXI1Q12951 378 aa13.46□□□□□ -0.25
FOXN3-214ENST00000557258 CIRBPQ14011 172 aaKnown RBP13.46□□□□□ -0.25
FOXN3-214ENST00000557258 ANKRD29Q8N6D5 301 aa13.46□□□□□ -0.25
FOXN3-214ENST00000557258 ICOSQ9Y6W8 199 aa13.46□□□□□ -0.25
FOXN3-214ENST00000557258 ATP6V0E2Q8NHE4 81 aa13.46□□□□□ -0.26
FOXN3-214ENST00000557258 SLC25A20O43772 301 aa13.45□□□□□ -0.26
FOXN3-214ENST00000557258 CIDEAO60543 219 aa13.45□□□□□ -0.26
FOXN3-214ENST00000557258 HTN3P15516 51 aa13.45□□□□□ -0.26
FOXN3-214ENST00000557258 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
FOXN3-214ENST00000557258 XCL1P47992 114 aa13.44□□□□□ -0.26
FOXN3-214ENST00000557258 CELA1Q9UNI1 258 aa13.44□□□□□ -0.26
FOXN3-214ENST00000557258 GAGE12HA6NDE8 117 aa13.44□□□□□ -0.26
FOXN3-214ENST00000557258 IGHV4-28A0A0C4DH34 117 aa13.43□□□□□ -0.26
FOXN3-214ENST00000557258 KIR2DL5BQ8NHK3 375 aa13.43□□□□□ -0.26
FOXN3-214ENST00000557258 J3QR89 54 aa13.42□□□□□ -0.26
FOXN3-214ENST00000557258 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
FOXN3-214ENST00000557258 FAM19A3Q7Z5A8 133 aa13.42□□□□□ -0.26
FOXN3-214ENST00000557258 NOTCH1P46531 2555 aa13.41□□□□□ -0.26
FOXN3-214ENST00000557258 PAX4O43316 350 aa13.41□□□□□ -0.26
FOXN3-214ENST00000557258 TEN1Q86WV5 123 aa13.41□□□□□ -0.26
FOXN3-214ENST00000557258 COX7B2Q8TF08 81 aa13.4□□□□□ -0.26
FOXN3-214ENST00000557258 TIMM17BO60830 172 aa13.4□□□□□ -0.26
FOXN3-214ENST00000557258 CITED1Q99966 193 aa13.4□□□□□ -0.26
FOXN3-214ENST00000557258 PRO0255Q9UI72 69 aa13.4□□□□□ -0.26
FOXN3-214ENST00000557258 IGLV10-54A0A075B6I4 117 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 ATXN8Q156A1 80 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 LINC01620Q4KN68 170 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 LINC00612Q8N6U2 182 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 IGHV3OR16-9A0A0B4J2B5 98 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 TRBV30A0A0K0K1B3 111 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 PFN2P35080 140 aa13.39□□□□□ -0.27
FOXN3-214ENST00000557258 TRAV26-1A0A087WT03 109 aa13.38□□□□□ -0.27
FOXN3-214ENST00000557258 LINC00959A0A1B0GUT2 108 aa13.37□□□□□ -0.27
FOXN3-214ENST00000557258 IFITM1P13164 125 aa13.37□□□□□ -0.27
FOXN3-214ENST00000557258 MIR7-3HGQ8N6C7 128 aa13.37□□□□□ -0.27
FOXN3-214ENST00000557258 TENM3Q9P273 2699 aa13.37□□□□□ -0.27
FOXN3-214ENST00000557258 DAD1P61803 113 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 OXLD1Q5BKU9 147 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 NTN5Q8WTR8 489 aaPredicted RBP13.36□□□□□ -0.27
FOXN3-214ENST00000557258 H7C423 109 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 TEX49A0A1B0GTD5 131 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 IGHV4-30-4P0DP06 118 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 LINC00158P58513 81 aa13.36□□□□□ -0.27
FOXN3-214ENST00000557258 PPDPFLQ8WWR9 84 aa13.35□□□□□ -0.27
FOXN3-214ENST00000557258 C2orf82Q6UX34 121 aa13.35□□□□□ -0.27
FOXN3-214ENST00000557258 LINC00269Q8N2A0 174 aa13.35□□□□□ -0.27
FOXN3-214ENST00000557258 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
FOXN3-214ENST00000557258 APOC4P55056 127 aa13.34□□□□□ -0.27
FOXN3-214ENST00000557258 SIGMAR1Q99720 223 aa13.34□□□□□ -0.27
FOXN3-214ENST00000557258 COX6CP09669 75 aa13.33□□□□□ -0.28
FOXN3-214ENST00000557258 RETNQ9HD89 108 aa13.32□□□□□ -0.28
FOXN3-214ENST00000557258 Q8NAQ8 132 aa13.32□□□□□ -0.28
FOXN3-214ENST00000557258 A0A087WZ39 114 aa13.31□□□□□ -0.28
FOXN3-214ENST00000557258 SPATA25Q9BR10 227 aa13.31□□□□□ -0.28
FOXN3-214ENST00000557258 CDIP1Q9H305 208 aa13.31□□□□□ -0.28
FOXN3-214ENST00000557258 LYRM9A8MSI8 78 aa13.31□□□□□ -0.28
FOXN3-214ENST00000557258 ANGP03950 147 aaKnown RBP13.31□□□□□ -0.28
FOXN3-214ENST00000557258 HERV-K104P63124 156 aa13.31□□□□□ -0.28
FOXN3-214ENST00000557258 COL6A5A8TX70 2615 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms