RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 IL15RAQ13261 267 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 ZNF56Q15929 161 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 IAH1Q2TAA2 248 aaPredicted RBP3.26□□□□□ -1.89
ATXN3-223ENST00000553686 KRTAP6-3Q3LI67 103 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 WFDC1Q9HC57 220 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-223ENST00000553686 BORCS7-ASMTA0A0B4J1R7 106 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 FAM25EA8MYX2 175 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 B4DEV8 164 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 M0R381 172 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 BCL2P10415 239 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-223ENST00000553686 RPL18AQ02543 176 aaKnown RBP3.25□□□□□ -1.89
ATXN3-223ENST00000553686 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 SS18Q15532 418 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 GCSAMLQ5JQS6 135 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 SAPCD1Q5SSQ6 148 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 C9orf129Q5T035 196 aaKnown RBP3.25□□□□□ -1.89
ATXN3-223ENST00000553686 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 ZFP82Q8N141 532 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 LINC00526Q96FQ7 95 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 KRTAP4-3Q9BYR4 195 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 CYTL1Q9NRR1 136 aa3.25□□□□□ -1.89
ATXN3-223ENST00000553686 H3BVH4 76 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 FGF7P21781 194 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 TAS2R45P59539 299 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 HBG1P69891 147 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 HBG2P69892 147 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 ATP6V1FQ16864 119 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 DNLZQ5SXM8 178 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 PRNTQ86SH4 94 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 KIR2DL4Q99706 377 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 NEBP20929 6669 aa3.24□□□□□ -1.89
ATXN3-223ENST00000553686 UBE2L5PA0A1B0GUS4 154 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 UMAD1C9J7I0 102 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-223ENST00000553686 CST7O76096 145 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 S100A9P06702 114 aaKnown RBP3.23□□□□□ -1.89
ATXN3-223ENST00000553686 SMIM6P0DI80 62 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 RPL12P30050 165 aaKnown RBP3.23□□□□□ -1.89
ATXN3-223ENST00000553686 RPL28P46779 137 aaKnown RBP3.23□□□□□ -1.89
ATXN3-223ENST00000553686 MEF2BQ02080 365 aaPredicted RBP3.23□□□□□ -1.89
ATXN3-223ENST00000553686 RHEBQ15382 184 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 KRTAP20-1Q3LI63 56 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 KHDC3LQ587J8 217 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 NUP35Q8NFH5 326 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 OR5C1Q8NGR4 320 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 CAMK2N2Q96S95 79 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 KCNIP2Q9NS61 270 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 GSKIPQ9P0R6 139 aa3.23□□□□□ -1.89
ATXN3-223ENST00000553686 IGKV2D-26A0A0A0MRZ7 120 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 FAM74A7A6NL05 159 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 C1orf196B1AJZ1 125 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 KRTAP4-16G5E9R7 235 aaPredicted RBP3.22□□□□□ -1.89
ATXN3-223ENST00000553686 NUPR1O60356 82 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 XCL1P47992 114 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 FAM229BQ4G0N7 80 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 FAM74A3Q4VXF1 159 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 AMMECR1LQ6DCA0 310 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 C2orf66Q6UXQ4 117 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 OR5A1Q8NGJ0 315 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 IMMP2LQ96T52 175 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 NPCDR1Q9BY65 106 aa3.22□□□□□ -1.89
ATXN3-223ENST00000553686 LSM5Q9Y4Y9 91 aaKnown RBP3.22□□□□□ -1.89
ATXN3-223ENST00000553686 GRIFINA4D1Z8 144 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 COLCA2A8K830 154 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 S100A6P06703 90 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 SMIM17P0DL12 118 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 ESDP10768 282 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 ADCYAP1P18509 176 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 TAGLN2P37802 199 aaKnown RBP3.21□□□□□ -1.9
ATXN3-223ENST00000553686 SULT1A1P50225 295 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 RPL7L1Q6DKI1 246 aaKnown RBP3.21□□□□□ -1.9
ATXN3-223ENST00000553686 FAM19A5Q7Z5A7 132 aaPredicted RBP3.21□□□□□ -1.9
ATXN3-223ENST00000553686 STX12Q86Y82 276 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 DAND5Q8N907 189 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 SFT2D1Q8WV19 159 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 C11orf1Q9H5F2 150 aa3.21□□□□□ -1.9
ATXN3-223ENST00000553686 C17orf112F2Z3M2 114 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 M0QXV9 152 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 CCL25O15444 150 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 TCRAP04437 139 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 S100PP25815 95 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 GNG5P63218 68 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 COTL1Q14019 142 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 KRTAP13-2Q52LG2 175 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 C5orf17Q8NAS9 161 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 OR2D3Q8NGH3 330 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 PGLYRP4Q96LB8 373 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 C12orf57Q99622 126 aa3.2□□□□□ -1.9
ATXN3-223ENST00000553686 TMEM242Q9NWH2 141 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms