RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 COL6A3P12111 3177 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 COX7A1P24310 79 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 LINC00315P59091 139 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 EGFEM1PQ0D2K5 195 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 MOBPQ13875 183 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 Q8N3U1 123 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 DEFB104AQ8WTQ1 72 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 SNURFQ9Y675 71 aa4.44□□□□□ -1.7
LINC02388-201ENST00000550678 CHD9Q3L8U1 2897 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 ZGRF1Q86YA3 2104 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 IGLV11-55A0A075B6I3 123 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 IGHV1-3A0A0C4DH29 117 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 DNAL4O96015 105 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 IGHV1-46P01743 117 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 PRR9Q5T870 116 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 RNF5Q99942 180 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 KIF25-AS1Q9Y6Z4 181 aa4.43□□□□□ -1.7
LINC02388-201ENST00000550678 TRBV6-5A0A0K0K1A5 114 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 IGHV1-8P0DP01 117 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 DSCR9P59020 149 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 C1orf134Q5TEV5 83 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 CNEP1R1Q8N9A8 125 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 LENEPQ9Y5L5 61 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 SPTBN5Q9NRC6 3674 aaKnown RBP4.42□□□□□ -1.7
LINC02388-201ENST00000550678 FAM186AA6NE01 2351 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 CTSGP08311 255 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 ATP5EP2Q5VTU8 51 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 LINC00846Q9NV44 126 aa4.42□□□□□ -1.7
LINC02388-201ENST00000550678 CUL9Q8IWT3 2517 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 IGLV5-39A0A0G2JS06 123 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 RPL37AP8A6NKH3 93 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 RPL36AP83881 106 aaKnown RBP4.41□□□□□ -1.7
LINC02388-201ENST00000550678 XAGE1AQ9HD64 81 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 ARHGAP32A7KAX9 2087 aa4.41□□□□□ -1.7
LINC02388-201ENST00000550678 TRBV10-3A0A0K0K1G6 114 aa4.4□□□□□ -1.7
LINC02388-201ENST00000550678 LY6HO94772 140 aa4.4□□□□□ -1.7
LINC02388-201ENST00000550678 RPL28P46779 137 aaKnown RBP4.4□□□□□ -1.7
LINC02388-201ENST00000550678 ROMO1P60602 79 aa4.4□□□□□ -1.7
LINC02388-201ENST00000550678 OBSCN-AS1Q96MR7 158 aa4.4□□□□□ -1.7
LINC02388-201ENST00000550678 NBEAQ8NFP9 2946 aa4.4□□□□□ -1.7
LINC02388-201ENST00000550678 DNAJC13O75165 2243 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 TRAV23DV6A0A075B6W5 121 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3OR16-8A0A075B7F1 116 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3-74A0A0B4J1X5 117 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 CLPSL1A2RUU4 121 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 ERC2-IT1O76042 136 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 IGLV1-47P01700 117 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 RNASE3P12724 160 aaKnown RBP4.4□□□□□ -1.71
LINC02388-201ENST00000550678 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 PRUNE2Q8WUY3 3088 aa4.4□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3-35A0A0C4DH35 117 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 KRTAP4-16G5E9R7 235 aaPredicted RBP4.39□□□□□ -1.71
LINC02388-201ENST00000550678 C10orf25Q5T742 122 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 LYPD2Q6UXB3 125 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 C14orf132Q9NPU4 83 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 REV3LO60673 3130 aa4.39□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3-66A0A0C4DH42 116 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 LIMD2Q9BT23 127 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 NCOR1O75376 2440 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 NDUFA1O15239 70 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 NDPQ00604 133 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 NPBQ8NG41 125 aa4.38□□□□□ -1.71
LINC02388-201ENST00000550678 CRPP02741 224 aa4.37□□□□□ -1.71
LINC02388-201ENST00000550678 C9orf129Q5T035 196 aaKnown RBP4.37□□□□□ -1.71
LINC02388-201ENST00000550678 A6NED7 52 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 M0QY20 66 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 SOCS3O14543 225 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 PSCAO43653 123 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3-11P01762 117 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 PRB3Q04118 309 aaPredicted RBP4.36□□□□□ -1.71
LINC02388-201ENST00000550678 LUZP6Q538Z0 58 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 PRRC2AP48634 2157 aaKnown RBP4.36□□□□□ -1.71
LINC02388-201ENST00000550678 TRBV7-4A0A0J9YYF1 115 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 Q8NDZ9 215 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 KAAG1Q9UBP8 84 aa4.36□□□□□ -1.71
LINC02388-201ENST00000550678 PLCE1Q9P212 2302 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 C9orf66Q5T8R8 295 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 CASC2Q6XLA1 102 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 CDC42SE2Q9NRR3 84 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 MALRD1Q5VYJ5 2156 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 TTC28Q96AY4 2481 aa4.35□□□□□ -1.71
LINC02388-201ENST00000550678 TRANK1O15050 2925 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 IGHV3-49A0A0A0MS15 119 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 TRBV6-8A0A0A6YYG3 113 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 PRR4Q16378 134 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 WFDC9Q8NEX5 89 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 BDP1A6H8Y1 2624 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 WDR87Q6ZQQ6 2873 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 FRYQ5TBA9 3013 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 SDK1Q7Z5N4 2213 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 A0A087WYN8 130 aa4.34□□□□□ -1.71
LINC02388-201ENST00000550678 A8MWP4 228 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms