RNA–Protein interactions for RNA: ENST00000550233.1

TMEM116-211, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 5

Gene TMEM116, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-211ENST00000550233 Q6JHZ5 121 aa1.29□□□□□ -2.2
TMEM116-211ENST00000550233 C9orf62Q8N4C0 152 aa1.29□□□□□ -2.2
TMEM116-211ENST00000550233 IQSEC2Q5JU85 1478 aa1.29□□□□□ -2.2
TMEM116-211ENST00000550233 ABCC3O15438 1527 aa1.29□□□□□ -2.2
TMEM116-211ENST00000550233 HAMPP81172 84 aa1.28□□□□□ -2.2
TMEM116-211ENST00000550233 FBN3Q75N90 2809 aa1.28□□□□□ -2.2
TMEM116-211ENST00000550233 ZNF236Q9UL36 1845 aa1.27□□□□□ -2.21
TMEM116-211ENST00000550233 M0R3E3 92 aa1.27□□□□□ -2.21
TMEM116-211ENST00000550233 HMGN3Q15651 99 aa1.27□□□□□ -2.21
TMEM116-211ENST00000550233 ZNF720Q7Z2F6 126 aa1.27□□□□□ -2.21
TMEM116-211ENST00000550233 CACNA1CQ13936 2221 aa1.27□□□□□ -2.21
TMEM116-211ENST00000550233 KIAA1551Q9HCM1 1747 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 ATP10BO94823 1461 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 A0A0D9SFI3 127 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 C10orf142B7Z368 130 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 SMIM11AP58511 58 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 SPATA8Q6RVD6 105 aa1.26□□□□□ -2.21
TMEM116-211ENST00000550233 CEP162Q5TB80 1403 aa1.25□□□□□ -2.21
TMEM116-211ENST00000550233 CACNA1HO95180 2353 aa1.25□□□□□ -2.21
TMEM116-211ENST00000550233 COX6A2Q02221 97 aa1.25□□□□□ -2.21
TMEM116-211ENST00000550233 SSBP3-AS1Q7Z2R9 100 aa1.25□□□□□ -2.21
TMEM116-211ENST00000550233 KDM3BQ7LBC6 1761 aa1.25□□□□□ -2.21
TMEM116-211ENST00000550233 CLTCQ00610 1675 aaKnown RBP1.25□□□□□ -2.21
TMEM116-211ENST00000550233 TENM1Q9UKZ4 2725 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 WNK3Q9BYP7 1800 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 C7orf77A4D0Y5 90 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 RABAC1Q9UI14 185 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 PDCD11Q14690 1871 aaKnown RBP1.24□□□□□ -2.21
TMEM116-211ENST00000550233 MYO7BQ6PIF6 2116 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 ZFHX3Q15911 3703 aa1.24□□□□□ -2.21
TMEM116-211ENST00000550233 TRBV6-1A0A0K0K1D8 114 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 K7EP34 96 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 PRB3Q04118 309 aaPredicted RBP1.23□□□□□ -2.21
TMEM116-211ENST00000550233 C10orf113Q5VZT2 155 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 C20orf78Q9BR46 151 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 CNFNQ9BYD5 112 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 SCN7AQ01118 1682 aa1.23□□□□□ -2.21
TMEM116-211ENST00000550233 PLIN4Q96Q06 1357 aa1.22□□□□□ -2.21
TMEM116-211ENST00000550233 GOLGA4Q13439 2230 aaKnown RBP1.22□□□□□ -2.21
TMEM116-211ENST00000550233 H3BQF6 201 aa1.22□□□□□ -2.21
TMEM116-211ENST00000550233 ETDBQ3ZM63 59 aa1.22□□□□□ -2.21
TMEM116-211ENST00000550233 ALKAL2Q6UX46 152 aa1.22□□□□□ -2.21
TMEM116-211ENST00000550233 ERCC6L2Q5T890 1561 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 KCPQ6ZWJ8 1503 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 NRXN1Q9ULB1 1477 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 LCN9Q8WX39 176 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 PLAC8Q9NZF1 115 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 SPCS1Q9Y6A9 102 aa1.21□□□□□ -2.22
TMEM116-211ENST00000550233 LRP6O75581 1613 aa1.2□□□□□ -2.22
TMEM116-211ENST00000550233 ARMS2P0C7Q2 107 aa1.2□□□□□ -2.22
TMEM116-211ENST00000550233 EDC4Q6P2E9 1401 aaKnown RBP1.2□□□□□ -2.22
TMEM116-211ENST00000550233 BTAF1O14981 1849 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 MED14O60244 1454 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 NLRP1Q9C000 1473 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 CYB5AP00167 134 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 PEA15Q15121 130 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 NUP188Q5SRE5 1749 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 S100A16Q96FQ6 103 aaKnown RBP1.19□□□□□ -2.22
TMEM116-211ENST00000550233 LINC01600Q96MT4 127 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 UACAQ9BZF9 1416 aa1.19□□□□□ -2.22
TMEM116-211ENST00000550233 C1orf167Q5SNV9 1468 aa1.18□□□□□ -2.22
TMEM116-211ENST00000550233 CCDC18Q5T9S5 1454 aa1.18□□□□□ -2.22
TMEM116-211ENST00000550233 PLXNB2O15031 1838 aa1.18□□□□□ -2.22
TMEM116-211ENST00000550233 ANKRD17O75179 2603 aaKnown RBP1.18□□□□□ -2.22
TMEM116-211ENST00000550233 A0A087WVE0 104 aa1.18□□□□□ -2.22
TMEM116-211ENST00000550233 FDCSPQ8NFU4 85 aa1.18□□□□□ -2.22
TMEM116-211ENST00000550233 BDP1A6H8Y1 2624 aa1.17□□□□□ -2.22
TMEM116-211ENST00000550233 HIGD1BQ9P298 99 aa1.17□□□□□ -2.22
TMEM116-211ENST00000550233 CRCT1Q9UGL9 99 aa1.17□□□□□ -2.22
TMEM116-211ENST00000550233 DNAJC13O75165 2243 aa1.17□□□□□ -2.22
TMEM116-211ENST00000550233 MON2Q7Z3U7 1717 aa1.17□□□□□ -2.22
TMEM116-211ENST00000550233 TTC28Q96AY4 2481 aa1.16□□□□□ -2.22
TMEM116-211ENST00000550233 F8WEM9 126 aa1.16□□□□□ -2.22
TMEM116-211ENST00000550233 POLA1P09884 1462 aaPredicted RBP1.16□□□□□ -2.22
TMEM116-211ENST00000550233 CUX1P39880 1505 aa1.15□□□□□ -2.22
TMEM116-211ENST00000550233 H0Y9P7 68 aa1.15□□□□□ -2.23
TMEM116-211ENST00000550233 SPTBN2O15020 2390 aa1.15□□□□□ -2.23
TMEM116-211ENST00000550233 MYO3AQ8NEV4 1616 aa1.15□□□□□ -2.23
TMEM116-211ENST00000550233 RGPD4Q7Z3J3 1758 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 D6R8Y8 96 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 LEPROTL1O95214 131 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 HMGN2P05204 90 aaKnown RBP1.14□□□□□ -2.23
TMEM116-211ENST00000550233 MUSTN1Q8IVN3 82 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 TP53AIP1Q9HCN2 124 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 PSENENQ9NZ42 101 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 POLQO75417 2590 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 F8P00451 2351 aa1.14□□□□□ -2.23
TMEM116-211ENST00000550233 SNRPFP62306 86 aaKnown RBP1.13□□□□□ -2.23
TMEM116-211ENST00000550233 ABCA12Q86UK0 2595 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 TRBV7-4A0A0J9YYF1 115 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 GNGT1P63211 74 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 PIGYQ3MUY2 71 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 KRTAP4-1Q9BYQ7 146 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 PRO0255Q9UI72 69 aa1.12□□□□□ -2.23
TMEM116-211ENST00000550233 XRN1Q8IZH2 1706 aaKnown RBP1.12□□□□□ -2.23
TMEM116-211ENST00000550233 A0A0G2JMZ2 1700 aa1.11□□□□□ -2.23
TMEM116-211ENST00000550233 PPLO60437 1756 aa1.11□□□□□ -2.23
TMEM116-211ENST00000550233 C2CD3Q4AC94 2353 aa1.11□□□□□ -2.23
TMEM116-211ENST00000550233 ZNF469Q96JG9 3925 aaPredicted RBP1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms