RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 MGPP08493 103 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 DEFB123Q8N688 67 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 UQCR10Q9UDW1 63 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 TCHHQ07283 1943 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 HMGXB3Q12766 1538 aa-0.19□□□□□ -2.44
LEMD3-206ENST00000545026 PSME4Q14997 1843 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 TOP2BQ02880 1626 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 NSD3Q9BZ95 1437 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 TOPAZ1Q8N9V7 1692 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 NUP188Q5SRE5 1749 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 WHAMMP3Q1A5X7 153 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 FAM167A-AS1Q96KT0 104 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 DPH3P1Q9H4G8 78 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 CDC42SE2Q9NRR3 84 aa-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 MAP1BP46821 2468 aaKnown RBP-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 SPTBN1Q01082 2364 aaKnown RBP-0.2□□□□□ -2.44
LEMD3-206ENST00000545026 SCN7AQ01118 1682 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 FAT2Q9NYQ8 4349 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 CHKB-CPT1BH3BT56 60 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 COX6B1P14854 86 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 TMEM263Q8WUH6 116 aaKnown RBP-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 IER3IP1Q9Y5U9 82 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 KIAA0556O60303 1618 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 SPHKAPQ2M3C7 1700 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 SCAPERQ9BY12 1400 aa-0.21□□□□□ -2.44
LEMD3-206ENST00000545026 TSC2P49815 1807 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 ARHGAP5Q13017 1502 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 DCHS2Q6V1P9 2916 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 ZFHX3Q15911 3703 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 FXYD6-FXYD2A0A087WZ82 144 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 PRM1P04553 51 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 GNG4P50150 75 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 SPRR4Q96PI1 79 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 NXT2Q9NPJ8 142 aaKnown RBP-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 FAIMQ9NVQ4 179 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 TNXBP22105 4242 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 PKD1L1Q8TDX9 2849 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 A0A0G2JMZ2 1700 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 CHD1O14646 1710 aa-0.22□□□□□ -2.44
LEMD3-206ENST00000545026 USF3Q68DE3 2245 aa-0.22□□□□□ -2.45
LEMD3-206ENST00000545026 APC2O95996 2303 aa-0.22□□□□□ -2.45
LEMD3-206ENST00000545026 PIEZO2Q9H5I5 2752 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 GVINP1Q7Z2Y8 2422 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 LRP1BQ9NZR2 4599 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 XRN1Q8IZH2 1706 aaKnown RBP-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 SRRM2Q9UQ35 2752 aaKnown RBP-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 FAM24AA6NFZ4 105 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 F6UZH7 168 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 UBE2D3P61077 147 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 UBE2D2P62837 147 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 VWFP04275 2813 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 BTAF1O14981 1849 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 WNK1Q9H4A3 2382 aa-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 POLA1P09884 1462 aaPredicted RBP-0.23□□□□□ -2.45
LEMD3-206ENST00000545026 CC2D2AQ9P2K1 1620 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 CSPG4Q6UVK1 2322 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 TENM2Q9NT68 2774 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 TRBV7-4A0A0J9YYF1 115 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 CORTO00230 105 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 COX6CP09669 75 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 IGLC1P0CG04 106 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 MYO7BQ6PIF6 2116 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 FAM223AQ8IWN6 122 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 MUC2Q02817 5179 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 ADGRL2O95490 1459 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 PZPP20742 1482 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 SETBP1Q9Y6X0 1596 aa-0.24□□□□□ -2.45
LEMD3-206ENST00000545026 SPTA1P02549 2419 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 NAP1L6A6NFF2 107 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 H3BQ15 152 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 K7EQZ3 153 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 C10orf113Q5VZT2 155 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 C2orf88Q9BSF0 95 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 BSNQ9UPA5 3926 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 C1orf167Q5SNV9 1468 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 ACANP16112 2415 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 HECTD4Q9Y4D8 3996 aa-0.25□□□□□ -2.45
LEMD3-206ENST00000545026 GNG11P61952 73 aa-0.26□□□□□ -2.45
LEMD3-206ENST00000545026 PPP3R1P63098 170 aa-0.26□□□□□ -2.45
LEMD3-206ENST00000545026 SVBPQ8N300 66 aa-0.26□□□□□ -2.45
LEMD3-206ENST00000545026 TMEM203Q969S6 136 aa-0.26□□□□□ -2.45
LEMD3-206ENST00000545026 PRO1933Q9H354 126 aa-0.26□□□□□ -2.45
LEMD3-206ENST00000545026 SPRR1BP22528 89 aa-0.27□□□□□ -2.45
LEMD3-206ENST00000545026 SPRR2BP35325 72 aa-0.27□□□□□ -2.45
LEMD3-206ENST00000545026 Q0VG73 95 aa-0.27□□□□□ -2.45
LEMD3-206ENST00000545026 PRO1854Q9UHT4 67 aa-0.27□□□□□ -2.45
LEMD3-206ENST00000545026 ARL2-SNX15V9GYD0 113 aa-0.27□□□□□ -2.45
LEMD3-206ENST00000545026 CCDC141Q6ZP82 1450 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 LINC00959A0A1B0GUT2 108 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 LINC00587B1AMM8 73 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 SAA2P0DJI9 122 aaPredicted RBP-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 MRPS10P82664 201 aaKnown RBP-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 MANBALQ9NQG1 85 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 ABCA3Q99758 1704 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 FLNBO75369 2602 aaKnown RBP-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 ATRQ13535 2644 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 STAB2Q8WWQ8 2551 aa-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 MAP1AP78559 2803 aaPredicted RBP-0.28□□□□□ -2.45
LEMD3-206ENST00000545026 GOLGA4Q13439 2230 aaKnown RBP-0.29□□□□□ -2.46
LEMD3-206ENST00000545026 FAM223BA6NKX1 122 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms