RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 HERVK_113P63121 156 aa11.93□□□□□ -0.5
TMEM50B-210ENST00000542230 NDUFA12Q9UI09 145 aa11.93□□□□□ -0.5
TMEM50B-210ENST00000542230 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 SMIM1B2RUZ4 78 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 IGHV3-30P01768 117 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 IGHV3-30-5P0DP03 117 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 RBX1P62877 108 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 FAM19A3Q7Z5A8 133 aa11.92□□□□□ -0.5
TMEM50B-210ENST00000542230 ADAMTSL4-AS1Q5T5F5 129 aa11.91□□□□□ -0.5
TMEM50B-210ENST00000542230 COL7A1Q02388 2944 aa11.9□□□□□ -0.5
TMEM50B-210ENST00000542230 Q6ZTC4 211 aa11.9□□□□□ -0.5
TMEM50B-210ENST00000542230 LITAFQ99732 161 aa11.9□□□□□ -0.5
TMEM50B-210ENST00000542230 IGLV5-39A0A0G2JS06 123 aa11.9□□□□□ -0.51
TMEM50B-210ENST00000542230 ZNF625Q96I27 306 aaPredicted RBP11.9□□□□□ -0.51
TMEM50B-210ENST00000542230 A0A0J9YWU9 116 aa11.89□□□□□ -0.51
TMEM50B-210ENST00000542230 UBE2V1Q13404 147 aa11.89□□□□□ -0.51
TMEM50B-210ENST00000542230 ZFAND6Q6FIF0 208 aa11.89□□□□□ -0.51
TMEM50B-210ENST00000542230 SMAGPQ0VAQ4 97 aa11.88□□□□□ -0.51
TMEM50B-210ENST00000542230 DAND5Q8N907 189 aa11.88□□□□□ -0.51
TMEM50B-210ENST00000542230 MRAPQ8TCY5 172 aa11.88□□□□□ -0.51
TMEM50B-210ENST00000542230 EIF4EBP3O60516 100 aaPredicted RBP11.87□□□□□ -0.51
TMEM50B-210ENST00000542230 NPC2P61916 151 aa11.87□□□□□ -0.51
TMEM50B-210ENST00000542230 SPANXB1Q9NS25 103 aaPredicted RBP11.87□□□□□ -0.51
TMEM50B-210ENST00000542230 STAB2Q8WWQ8 2551 aa11.87□□□□□ -0.51
TMEM50B-210ENST00000542230 K7EIL1 84 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 APOMO95445 188 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 NANOS2P60321 138 aaKnown RBP11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 MUSTN1Q8IVN3 82 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 A0A0U1RRA0 63 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 C5orf38Q86SI9 138 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 Q9H8V8 135 aa11.86□□□□□ -0.51
TMEM50B-210ENST00000542230 A0A1B0GWB2 263 aa11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 MRPL23Q16540 153 aaKnown RBP11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 IGHV3OR16-9A0A0B4J2B5 98 aa11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 A0A1W2PPM0 123 aa11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 IGLL5B9A064 214 aa11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
TMEM50B-210ENST00000542230 A0A1B0GUV1 79 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 XCL1P47992 114 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 SFTA2Q6UW10 78 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 PRSS2P07478 247 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 CFC1BP0CG36 223 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 CFC1P0CG37 223 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 ICOSQ9Y6W8 199 aa11.84□□□□□ -0.51
TMEM50B-210ENST00000542230 A4D1N5 150 aa11.83□□□□□ -0.52
TMEM50B-210ENST00000542230 NDUFA1O15239 70 aa11.83□□□□□ -0.52
TMEM50B-210ENST00000542230 IGLV10-54A0A075B6I4 117 aa11.82□□□□□ -0.52
TMEM50B-210ENST00000542230 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
TMEM50B-210ENST00000542230 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
TMEM50B-210ENST00000542230 ANGP03950 147 aaKnown RBP11.81□□□□□ -0.52
TMEM50B-210ENST00000542230 KPRPQ5T749 579 aaPredicted RBP11.81□□□□□ -0.52
TMEM50B-210ENST00000542230 C11orf68Q9H3H3 251 aaKnown RBP11.81□□□□□ -0.52
TMEM50B-210ENST00000542230 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
TMEM50B-210ENST00000542230 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
TMEM50B-210ENST00000542230 GAGE10A6NGK3 116 aa11.8□□□□□ -0.52
TMEM50B-210ENST00000542230 DNAH9Q9NYC9 4486 aa11.79□□□□□ -0.52
TMEM50B-210ENST00000542230 DNHD1Q96M86 4753 aa11.79□□□□□ -0.52
TMEM50B-210ENST00000542230 TEX48A0A1B0GUV7 120 aa11.79□□□□□ -0.52
TMEM50B-210ENST00000542230 SPCS1Q9Y6A9 102 aa11.79□□□□□ -0.52
TMEM50B-210ENST00000542230 TMEM238LA0A1B0GVL6 79 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 A6NJY4 79 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 LELP1Q5T871 98 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 C11orf45Q8TAV5 145 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 A0A087WZ39 114 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 TSPAN13O95857 204 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 FABP2P12104 132 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 LYSTQ99698 3801 aa11.78□□□□□ -0.52
TMEM50B-210ENST00000542230 K7EP34 96 aa11.77□□□□□ -0.52
TMEM50B-210ENST00000542230 COX7B2Q8TF08 81 aa11.77□□□□□ -0.52
TMEM50B-210ENST00000542230 REG3AQ06141 175 aa11.77□□□□□ -0.53
TMEM50B-210ENST00000542230 MIAQ16674 131 aa11.77□□□□□ -0.53
TMEM50B-210ENST00000542230 SS18Q15532 418 aa11.76□□□□□ -0.53
TMEM50B-210ENST00000542230 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
TMEM50B-210ENST00000542230 SPANXDQ9BXN6 97 aa11.76□□□□□ -0.53
TMEM50B-210ENST00000542230 SPANXCQ9NY87 97 aa11.76□□□□□ -0.53
TMEM50B-210ENST00000542230 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 H7C2G1 150 aa11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 IGHV3-33P01772 117 aa11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 TM2D3Q9BRN9 247 aa11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 CHCHD10Q8WYQ3 142 aaPredicted RBP11.75□□□□□ -0.53
TMEM50B-210ENST00000542230 RPL24P83731 157 aaKnown RBP11.74□□□□□ -0.53
TMEM50B-210ENST00000542230 SOSTDC1Q6X4U4 206 aa11.74□□□□□ -0.53
TMEM50B-210ENST00000542230 ESRGQ1W209 222 aa11.74□□□□□ -0.53
TMEM50B-210ENST00000542230 MEIG1Q5JSS6 88 aa11.74□□□□□ -0.53
TMEM50B-210ENST00000542230 SPATA25Q9BR10 227 aa11.72□□□□□ -0.53
TMEM50B-210ENST00000542230 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
TMEM50B-210ENST00000542230 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
TMEM50B-210ENST00000542230 SH2D6Q7Z4S9 175 aa11.72□□□□□ -0.53
TMEM50B-210ENST00000542230 TIMM17BO60830 172 aa11.71□□□□□ -0.53
TMEM50B-210ENST00000542230 ENHOQ6UWT2 76 aa11.71□□□□□ -0.54
TMEM50B-210ENST00000542230 GTF2H5Q6ZYL4 71 aa11.71□□□□□ -0.54
TMEM50B-210ENST00000542230 MTURNQ8N3F0 131 aa11.71□□□□□ -0.54
TMEM50B-210ENST00000542230 LINC00308Q8TCZ7 52 aa11.71□□□□□ -0.54
TMEM50B-210ENST00000542230 TENM2Q9NT68 2774 aa11.71□□□□□ -0.54
TMEM50B-210ENST00000542230 LOC107984156A0A0G2JMH3 177 aa11.7□□□□□ -0.54
TMEM50B-210ENST00000542230 H3BMG7 143 aa11.7□□□□□ -0.54
TMEM50B-210ENST00000542230 ARL17AQ8IVW1 177 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms