RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 TRIAP1O43715 76 aa10.62□□□□□ -0.71
GCFC2-211ENST00000541687 CRIP2P52943 208 aaPredicted RBP10.62□□□□□ -0.71
GCFC2-211ENST00000541687 APOC4P55056 127 aa10.62□□□□□ -0.71
GCFC2-211ENST00000541687 UBE2BP63146 152 aa10.62□□□□□ -0.71
GCFC2-211ENST00000541687 NDUFA7O95182 113 aa10.61□□□□□ -0.71
GCFC2-211ENST00000541687 KALRNO60229 2985 aa10.61□□□□□ -0.71
GCFC2-211ENST00000541687 TMEM258P61165 79 aa10.61□□□□□ -0.71
GCFC2-211ENST00000541687 DMXL2Q8TDJ6 3036 aa10.61□□□□□ -0.71
GCFC2-211ENST00000541687 DEFB135Q30KP9 77 aa10.6□□□□□ -0.71
GCFC2-211ENST00000541687 NCR3O14931 201 aa10.6□□□□□ -0.71
GCFC2-211ENST00000541687 PIK3CD-AS1Q5SR53 167 aa10.6□□□□□ -0.71
GCFC2-211ENST00000541687 TRAV23DV6A0A075B6W5 121 aa10.59□□□□□ -0.71
GCFC2-211ENST00000541687 LOC100131303A0A0U1RQF7 123 aa10.59□□□□□ -0.71
GCFC2-211ENST00000541687 NREPQ16612 68 aa10.59□□□□□ -0.71
GCFC2-211ENST00000541687 ATMQ13315 3056 aa10.58□□□□□ -0.72
GCFC2-211ENST00000541687 NDUFS5O43920 106 aa10.58□□□□□ -0.72
GCFC2-211ENST00000541687 ETDCA0A1B0GVM5 59 aa10.58□□□□□ -0.72
GCFC2-211ENST00000541687 FUSP35637 526 aaKnown RBP eCLIP10.58□□□□□ -0.72
GCFC2-211ENST00000541687 NDUFV3P56181 108 aaKnown RBP10.57□□□□□ -0.72
GCFC2-211ENST00000541687 ZNF843Q8N446 348 aa10.57□□□□□ -0.72
GCFC2-211ENST00000541687 KLK12Q9UKR0 248 aa10.57□□□□□ -0.72
GCFC2-211ENST00000541687 TRBV10-1A0A0K0K1A3 114 aa10.57□□□□□ -0.72
GCFC2-211ENST00000541687 RPL18AQ02543 176 aaKnown RBP10.57□□□□□ -0.72
GCFC2-211ENST00000541687 UBE2D4Q9Y2X8 147 aa10.57□□□□□ -0.72
GCFC2-211ENST00000541687 SMG1Q96Q15 3661 aaKnown RBP10.57□□□□□ -0.72
GCFC2-211ENST00000541687 POM121L12Q8N7R1 296 aa10.56□□□□□ -0.72
GCFC2-211ENST00000541687 J3KT08 172 aa10.56□□□□□ -0.72
GCFC2-211ENST00000541687 KIF25-AS1Q9Y6Z4 181 aa10.56□□□□□ -0.72
GCFC2-211ENST00000541687 Q6ZSN1 163 aa10.56□□□□□ -0.72
GCFC2-211ENST00000541687 TACC2O95359 2948 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 LINC00643Q86TS7 51 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 C20orf197Q8N268 126 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 SDIM1Q6ZPB5 146 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 PYGO1Q9Y3Y4 419 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 ODF3L2Q3SX64 289 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
GCFC2-211ENST00000541687 UBE2D1P51668 147 aa10.54□□□□□ -0.72
GCFC2-211ENST00000541687 SPAG11BQ08648 103 aa10.54□□□□□ -0.72
GCFC2-211ENST00000541687 SPATA25Q9BR10 227 aa10.54□□□□□ -0.72
GCFC2-211ENST00000541687 SLPIP03973 132 aa10.54□□□□□ -0.72
GCFC2-211ENST00000541687 Q9UF83 564 aa10.54□□□□□ -0.72
GCFC2-211ENST00000541687 JMJD7-PLA2G4BH0Y9G9 81 aa10.53□□□□□ -0.72
GCFC2-211ENST00000541687 LINC00482Q8N8I6 264 aa10.53□□□□□ -0.72
GCFC2-211ENST00000541687 LINC00315P59091 139 aa10.53□□□□□ -0.72
GCFC2-211ENST00000541687 WFDC9Q8NEX5 89 aa10.52□□□□□ -0.73
GCFC2-211ENST00000541687 LINC01006Q8NI28 216 aa10.52□□□□□ -0.73
GCFC2-211ENST00000541687 MRPS36P82909 103 aaKnown RBP10.52□□□□□ -0.73
GCFC2-211ENST00000541687 SPART-AS1P0CW21 52 aa10.51□□□□□ -0.73
GCFC2-211ENST00000541687 ZZEF1O43149 2961 aa10.51□□□□□ -0.73
GCFC2-211ENST00000541687 XGP55808 180 aa10.51□□□□□ -0.73
GCFC2-211ENST00000541687 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
GCFC2-211ENST00000541687 ADAMTSL4-AS1Q5T5F5 129 aa10.51□□□□□ -0.73
GCFC2-211ENST00000541687 NDUFA1O15239 70 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 FAM222AQ5U5X8 452 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 SCXQ7RTU7 201 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 LRBAP50851 2863 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 TRBV30A0A0K0K1B3 111 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 TIRAPP58753 221 aa10.49□□□□□ -0.73
GCFC2-211ENST00000541687 HIGD2BQ4VC39 106 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 LINC00269Q8N2A0 174 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 SPANXCQ9NY87 97 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 PRO0255Q9UI72 69 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 PLA2G2AP14555 144 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 COX6A2Q02221 97 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 LRRC75A-AS1Q8N1F1 130 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 DCHS1Q96JQ0 3298 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 LINC01546A6NGU7 62 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
GCFC2-211ENST00000541687 BRI3O95415 125 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 BBC3Q96PG8 261 aaPredicted RBP10.47□□□□□ -0.73
GCFC2-211ENST00000541687 TMEM256-PLSCR3K7ERE1 68 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 C1orf158Q8N1D5 194 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 DIRC1Q969H9 104 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 RMI2Q96E14 147 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 BRK1Q8WUW1 75 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 SMR3AQ99954 134 aa10.47□□□□□ -0.73
GCFC2-211ENST00000541687 TRBV6-8A0A0A6YYG3 113 aa10.46□□□□□ -0.73
GCFC2-211ENST00000541687 C9orf66Q5T8R8 295 aa10.46□□□□□ -0.73
GCFC2-211ENST00000541687 FAM19A4Q96LR4 140 aa10.46□□□□□ -0.73
GCFC2-211ENST00000541687 UBE2D3P61077 147 aa10.46□□□□□ -0.74
GCFC2-211ENST00000541687 UBE2D2P62837 147 aa10.46□□□□□ -0.74
GCFC2-211ENST00000541687 FAM110AQ9BQ89 295 aa10.45□□□□□ -0.74
GCFC2-211ENST00000541687 MP68P56378 58 aa10.44□□□□□ -0.74
GCFC2-211ENST00000541687 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
GCFC2-211ENST00000541687 XAGE1AQ9HD64 81 aa10.44□□□□□ -0.74
GCFC2-211ENST00000541687 A0A096LNI7 61 aa10.44□□□□□ -0.74
GCFC2-211ENST00000541687 UPK3BQ9BT76 320 aa10.44□□□□□ -0.74
GCFC2-211ENST00000541687 UQCRQO14949 82 aa10.43□□□□□ -0.74
GCFC2-211ENST00000541687 CDC42SE2Q9NRR3 84 aa10.43□□□□□ -0.74
GCFC2-211ENST00000541687 AMELXQ99217 191 aa10.43□□□□□ -0.74
GCFC2-211ENST00000541687 BSNQ9UPA5 3926 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 TRBV6-4A0A1B0GX49 114 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 H7C423 109 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 CLUHP3Q96NS8 147 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 FLNAP21333 2647 aaKnown RBP10.42□□□□□ -0.74
GCFC2-211ENST00000541687 COL12A1Q99715 3063 aa10.42□□□□□ -0.74
GCFC2-211ENST00000541687 INAFM1C9JVW0 142 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms