RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 TRBV10-1A0A0K0K1A3 114 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 UBE2L6O14933 153 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 NDUFA1O15239 70 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 HERVK_113P63121 156 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 GAGE6Q13070 117 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 SPATA3Q8NHX4 192 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 OTOGQ6ZRI0 2925 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 INAFM1C9JVW0 142 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 ATP6V0E2Q8NHE4 81 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 ICOSQ9Y6W8 199 aa8.14□□□□□ -1.11
C11orf54-214ENST00000540113 DEFB130BP0DP73 79 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 DEFB130AP0DP74 79 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 RPL13AP40429 203 aaKnown RBP8.13□□□□□ -1.11
C11orf54-214ENST00000540113 LINC00482Q8N8I6 264 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 PPDPFLQ8WWR9 84 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 LINC01620Q4KN68 170 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 TMEM243Q9BU79 118 aa8.13□□□□□ -1.11
C11orf54-214ENST00000540113 IGLV4-60A0A075B6I1 120 aa8.12□□□□□ -1.11
C11orf54-214ENST00000540113 TRBV30A0A0K0K1B3 111 aa8.12□□□□□ -1.11
C11orf54-214ENST00000540113 F5H768 121 aa8.12□□□□□ -1.11
C11orf54-214ENST00000540113 ATXN8Q156A1 80 aa8.12□□□□□ -1.11
C11orf54-214ENST00000540113 SOSTDC1Q6X4U4 206 aa8.12□□□□□ -1.11
C11orf54-214ENST00000540113 FHL2Q14192 279 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 MEIG1Q5JSS6 88 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 PRIMA1Q86XR5 153 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 LINC00308Q8TCZ7 52 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 NTN5Q8WTR8 489 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-214ENST00000540113 MT-ATP8P03928 68 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 OVOL2Q9BRP0 275 aa8.11□□□□□ -1.11
C11orf54-214ENST00000540113 CRLF1O75462 422 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
C11orf54-214ENST00000540113 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 TEX49A0A1B0GTD5 131 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 J3QL48 77 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 XGP55808 180 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
C11orf54-214ENST00000540113 TOMM7Q9P0U1 55 aa8.1□□□□□ -1.11
C11orf54-214ENST00000540113 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-214ENST00000540113 A0A096LPF7 62 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 TRBV6-4A0A1B0GX49 114 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 TIMM17BO60830 172 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 CHCHD5Q9BSY4 110 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 CIDEAO60543 219 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 FAM19A3Q7Z5A8 133 aa8.09□□□□□ -1.11
C11orf54-214ENST00000540113 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
C11orf54-214ENST00000540113 DEFB4AO15263 64 aa8.08□□□□□ -1.12
C11orf54-214ENST00000540113 H7C423 109 aa8.08□□□□□ -1.12
C11orf54-214ENST00000540113 IFITM1P13164 125 aa8.08□□□□□ -1.12
C11orf54-214ENST00000540113 TRBV6-8A0A0A6YYG3 113 aa8.07□□□□□ -1.12
C11orf54-214ENST00000540113 TRBV10-2A0A0K0K1G8 114 aa8.07□□□□□ -1.12
C11orf54-214ENST00000540113 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
C11orf54-214ENST00000540113 COX6CP09669 75 aa8.06□□□□□ -1.12
C11orf54-214ENST00000540113 CLPSL2Q6UWE3 100 aa8.06□□□□□ -1.12
C11orf54-214ENST00000540113 C5orf38Q86SI9 138 aa8.06□□□□□ -1.12
C11orf54-214ENST00000540113 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
C11orf54-214ENST00000540113 GHRHP01286 108 aa8.05□□□□□ -1.12
C11orf54-214ENST00000540113 GYPEP15421 78 aa8.05□□□□□ -1.12
C11orf54-214ENST00000540113 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
C11orf54-214ENST00000540113 COX7B2Q8TF08 81 aa8.04□□□□□ -1.12
C11orf54-214ENST00000540113 TMEM262E9PQX1 116 aa8.04□□□□□ -1.12
C11orf54-214ENST00000540113 LST1O00453 97 aa8.04□□□□□ -1.12
C11orf54-214ENST00000540113 X6R8D5 127 aa8.04□□□□□ -1.12
C11orf54-214ENST00000540113 TNP2Q05952 138 aa8.03□□□□□ -1.12
C11orf54-214ENST00000540113 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
C11orf54-214ENST00000540113 RNF183Q96D59 192 aa8.03□□□□□ -1.12
C11orf54-214ENST00000540113 HIVEP1P15822 2718 aa8.03□□□□□ -1.12
C11orf54-214ENST00000540113 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
C11orf54-214ENST00000540113 SCGB1A1P11684 91 aa8.02□□□□□ -1.13
C11orf54-214ENST00000540113 UBE2WQ96B02 151 aa8.02□□□□□ -1.13
C11orf54-214ENST00000540113 DEFB135Q30KP9 77 aa8.02□□□□□ -1.13
C11orf54-214ENST00000540113 IGHV3OR16-9A0A0B4J2B5 98 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 M0QXV9 152 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 PFN2P35080 140 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 XCL1P47992 114 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 LINC00158P58513 81 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 C9orf66Q5T8R8 295 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 FAM222AQ5U5X8 452 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 Q8N3U1 123 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 KIR2DL5BQ8NHK3 375 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 HERV-K104P63124 156 aa8.01□□□□□ -1.13
C11orf54-214ENST00000540113 LINC00959A0A1B0GUT2 108 aa8□□□□□ -1.13
C11orf54-214ENST00000540113 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
C11orf54-214ENST00000540113 TRRAPQ9Y4A5 3859 aa8□□□□□ -1.13
C11orf54-214ENST00000540113 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 LINC00337Q8N6G1 96 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 COX7A2LO14548 114 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 CKS1BP61024 79 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 CITED1Q99966 193 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 ATRQ13535 2644 aa7.99□□□□□ -1.13
C11orf54-214ENST00000540113 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 ZNF561-AS1K7EIQ3 104 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 SND1-IT1Q9HBX3 110 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 A0A087WZ39 114 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 H3BT86 120 aa7.98□□□□□ -1.13
C11orf54-214ENST00000540113 PAX4O43316 350 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms