RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 RPL24P83731 157 aaKnown RBP14.19□□□□□ -0.14
PACSIN3-211ENST00000539589 HUWE1Q7Z6Z7 4374 aaKnown RBP14.18□□□□□ -0.14
PACSIN3-211ENST00000539589 CFC1BP0CG36 223 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 CFC1P0CG37 223 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 GAGE6Q13070 117 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 GYPEP15421 78 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 MUSTN1Q8IVN3 82 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 CHCHD5Q9BSY4 110 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 RETNQ9HD89 108 aa14.17□□□□□ -0.14
PACSIN3-211ENST00000539589 TENM3Q9P273 2699 aa14.16□□□□□ -0.14
PACSIN3-211ENST00000539589 IGLV5-39A0A0G2JS06 123 aa14.16□□□□□ -0.14
PACSIN3-211ENST00000539589 MIFP14174 115 aa14.16□□□□□ -0.14
PACSIN3-211ENST00000539589 LITAFQ99732 161 aa14.16□□□□□ -0.14
PACSIN3-211ENST00000539589 A4D1N5 150 aa14.15□□□□□ -0.14
PACSIN3-211ENST00000539589 ATP6V0E2Q8NHE4 81 aa14.15□□□□□ -0.14
PACSIN3-211ENST00000539589 DNHD1Q96M86 4753 aa14.15□□□□□ -0.14
PACSIN3-211ENST00000539589 NDUFA1O15239 70 aa14.15□□□□□ -0.14
PACSIN3-211ENST00000539589 TSPAN13O95857 204 aa14.15□□□□□ -0.14
PACSIN3-211ENST00000539589 CELA1Q9UNI1 258 aa14.14□□□□□ -0.15
PACSIN3-211ENST00000539589 SPANXDQ9BXN6 97 aa14.14□□□□□ -0.15
PACSIN3-211ENST00000539589 SPANXCQ9NY87 97 aa14.14□□□□□ -0.15
PACSIN3-211ENST00000539589 PRO1854Q9UHT4 67 aa14.14□□□□□ -0.15
PACSIN3-211ENST00000539589 SMIM1B2RUZ4 78 aa14.13□□□□□ -0.15
PACSIN3-211ENST00000539589 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.12□□□□□ -0.15
PACSIN3-211ENST00000539589 TIMM17BO60830 172 aa14.12□□□□□ -0.15
PACSIN3-211ENST00000539589 PRSS2P07478 247 aa14.12□□□□□ -0.15
PACSIN3-211ENST00000539589 ADAMTSL4-AS1Q5T5F5 129 aa14.12□□□□□ -0.15
PACSIN3-211ENST00000539589 F5H768 121 aa14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 K7EIL1 84 aa14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 PAX4O43316 350 aa14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 OCIAD2Q56VL3 154 aa14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 KPRPQ5T749 579 aaPredicted RBP14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 DNAH9Q9NYC9 4486 aa14.11□□□□□ -0.15
PACSIN3-211ENST00000539589 IGLV4-60A0A075B6I1 120 aa14.1□□□□□ -0.15
PACSIN3-211ENST00000539589 A0A0B4J2C4 111 aa14.1□□□□□ -0.15
PACSIN3-211ENST00000539589 DAD1P61803 113 aa14.1□□□□□ -0.15
PACSIN3-211ENST00000539589 MIAQ16674 131 aa14.1□□□□□ -0.15
PACSIN3-211ENST00000539589 LYRM7Q5U5X0 104 aa14.1□□□□□ -0.15
PACSIN3-211ENST00000539589 H3BMG7 143 aa14.09□□□□□ -0.15
PACSIN3-211ENST00000539589 CIRBPQ14011 172 aaKnown RBP14.09□□□□□ -0.15
PACSIN3-211ENST00000539589 Q9H8V8 135 aa14.09□□□□□ -0.15
PACSIN3-211ENST00000539589 LOC107984156A0A0G2JMH3 177 aa14.08□□□□□ -0.15
PACSIN3-211ENST00000539589 ARL17AQ8IVW1 177 aa14.08□□□□□ -0.15
PACSIN3-211ENST00000539589 F8W1H4 67 aa14.07□□□□□ -0.16
PACSIN3-211ENST00000539589 IGKV3OR2-268A0A0C4DH90 116 aa14.07□□□□□ -0.16
PACSIN3-211ENST00000539589 ATP5G1P05496 136 aa14.06□□□□□ -0.16
PACSIN3-211ENST00000539589 SPART-AS1P0CW21 52 aa14.06□□□□□ -0.16
PACSIN3-211ENST00000539589 IFITM1P13164 125 aa14.06□□□□□ -0.16
PACSIN3-211ENST00000539589 SFTA2Q6UW10 78 aa14.06□□□□□ -0.16
PACSIN3-211ENST00000539589 TMEM262E9PQX1 116 aa14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 K7ERU9 68 aa14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 ERG28Q9UKR5 140 aa14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 A0A1B0GUV1 79 aa14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 IGHV3-33P01772 117 aa14.05□□□□□ -0.16
PACSIN3-211ENST00000539589 A0A096LPF7 62 aa14.03□□□□□ -0.16
PACSIN3-211ENST00000539589 HERV-K104P63124 156 aa14.03□□□□□ -0.16
PACSIN3-211ENST00000539589 ZNF625Q96I27 306 aaPredicted RBP14.03□□□□□ -0.16
PACSIN3-211ENST00000539589 PSMB2P49721 201 aa14.02□□□□□ -0.16
PACSIN3-211ENST00000539589 NPC2P61916 151 aa14.02□□□□□ -0.17
PACSIN3-211ENST00000539589 RBX1P62877 108 aa14.02□□□□□ -0.17
PACSIN3-211ENST00000539589 TRBV20-1A0A075B6N2 111 aa14.01□□□□□ -0.17
PACSIN3-211ENST00000539589 IGHV3OR16-9A0A0B4J2B5 98 aa14.01□□□□□ -0.17
PACSIN3-211ENST00000539589 SCGB1C2P0DMR2 95 aa14.01□□□□□ -0.17
PACSIN3-211ENST00000539589 TRAV26-1A0A087WT03 109 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 LINC00959A0A1B0GUT2 108 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 DEFB121Q5J5C9 76 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 DAND5Q8N907 189 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 H7C2G1 150 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 WFDC2Q14508 124 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 COX7B2Q8TF08 81 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 COPS9Q8WXC6 57 aa14□□□□□ -0.17
PACSIN3-211ENST00000539589 Q1RN00 199 aa13.99□□□□□ -0.17
PACSIN3-211ENST00000539589 MEIG1Q5JSS6 88 aa13.99□□□□□ -0.17
PACSIN3-211ENST00000539589 PRO0461Q9UI25 63 aa13.99□□□□□ -0.17
PACSIN3-211ENST00000539589 A0A087WZ39 114 aa13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 TEX48A0A1B0GUV7 120 aa13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 SS18Q15532 418 aa13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 RNF151Q2KHN1 245 aa13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 MRAPQ8TCY5 172 aa13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 C11orf68Q9H3H3 251 aaKnown RBP13.98□□□□□ -0.17
PACSIN3-211ENST00000539589 TCL1BO95988 128 aa13.97□□□□□ -0.17
PACSIN3-211ENST00000539589 LINC00308Q8TCZ7 52 aa13.97□□□□□ -0.17
PACSIN3-211ENST00000539589 TM2D3Q9BRN9 247 aa13.97□□□□□ -0.17
PACSIN3-211ENST00000539589 A0A0J9YWU9 116 aa13.97□□□□□ -0.17
PACSIN3-211ENST00000539589 MRPL23Q16540 153 aaKnown RBP13.97□□□□□ -0.17
PACSIN3-211ENST00000539589 A0A0U1RRA0 63 aa13.96□□□□□ -0.17
PACSIN3-211ENST00000539589 HTN3P15516 51 aa13.96□□□□□ -0.17
PACSIN3-211ENST00000539589 TOMM7Q9P0U1 55 aa13.96□□□□□ -0.17
PACSIN3-211ENST00000539589 SH2D6Q7Z4S9 175 aa13.95□□□□□ -0.18
PACSIN3-211ENST00000539589 C5orf38Q86SI9 138 aa13.95□□□□□ -0.18
PACSIN3-211ENST00000539589 MTURNQ8N3F0 131 aa13.95□□□□□ -0.18
PACSIN3-211ENST00000539589 CBY1Q9Y3M2 126 aa13.95□□□□□ -0.18
PACSIN3-211ENST00000539589 SPATA25Q9BR10 227 aa13.94□□□□□ -0.18
PACSIN3-211ENST00000539589 ICOSQ9Y6W8 199 aa13.93□□□□□ -0.18
PACSIN3-211ENST00000539589 TRBV30A0A0K0K1B3 111 aa13.93□□□□□ -0.18
PACSIN3-211ENST00000539589 XCL1P47992 114 aa13.93□□□□□ -0.18
PACSIN3-211ENST00000539589 COL7A1Q02388 2944 aa13.93□□□□□ -0.18
PACSIN3-211ENST00000539589 ETDBQ3ZM63 59 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms