RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 PFDN5Q99471 154 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 PAIP2BQ9ULR5 123 aaKnown RBP-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 PKHD1L1Q86WI1 4243 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 SPEF2Q9C093 1822 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 ZFHX4Q86UP3 3567 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 DNAH3Q8TD57 4116 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 DNAH6Q9C0G6 4158 aa-0.6□□□□□ -2.51
CCDC7-208ENST00000537047 WNK1Q9H4A3 2382 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 MYOM3Q5VTT5 1437 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 PPIP5K1Q6PFW1 1433 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 HIST1H1DP16402 221 aaKnown RBP-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 Q6JHZ5 121 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 PDCD10Q9BUL8 212 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 EYSQ5T1H1 3165 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 GRIN2AQ12879 1464 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 VPS13DQ5THJ4 4388 aa-0.61□□□□□ -2.51
CCDC7-208ENST00000537047 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 A0A0C4DFX4 3053 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 PLCE1Q9P212 2302 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 UQCR11O14957 56 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 ARPC4P59998 168 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 BAGE2Q86Y30 109 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 CSMD1Q96PZ7 3565 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 TLN1Q9Y490 2541 aaKnown RBP-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 PKD1L2Q7Z442 2459 aa-0.62□□□□□ -2.51
CCDC7-208ENST00000537047 APOC3P02656 99 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 COX6B1P14854 86 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 TPPP2P59282 170 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 Q8N8P6 123 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 RERGLQ9H628 205 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 LINC00472Q9H8W2 130 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 USF3Q68DE3 2245 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 CFTRP13569 1480 aa-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 SPTBN1Q01082 2364 aaKnown RBP-0.63□□□□□ -2.51
CCDC7-208ENST00000537047 ARAP2Q8WZ64 1704 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 SPEGQ15772 3267 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 KALRNO60229 2985 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 F8VRH5 84 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 TNFP01375 233 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 SPRR2FQ96RM1 72 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 SERP1Q9Y6X1 66 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 CSPG4Q6UVK1 2322 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 RELNP78509 3460 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 UNC80Q8N2C7 3258 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 BOD1L1Q8NFC6 3051 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 PATJQ8NI35 1801 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 ZNF236Q9UL36 1845 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 PAPPAQ13219 1627 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 FAM186AA6NE01 2351 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 TRRAPQ9Y4A5 3859 aa-0.64□□□□□ -2.51
CCDC7-208ENST00000537047 SVEP1Q4LDE5 3571 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 WDR7Q9Y4E6 1490 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 LOC400499M0QZD8 3231 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 SBF2Q86WG5 1849 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 LOC105371267A0A1B0GV96 52 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 KRTAP6-2Q3LI66 62 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 Q6AWC8 147 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 MGST2Q99735 147 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 SNRNP25Q9BV90 132 aaKnown RBP-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 NDUFA4L2Q9NRX3 87 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 DCHS1Q96JQ0 3298 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 DNAH17Q9UFH2 4485 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 DOCK1Q14185 1865 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 PI4KAP42356 2102 aa-0.65□□□□□ -2.51
CCDC7-208ENST00000537047 DOCK2Q92608 1830 aa-0.66□□□□□ -2.51
CCDC7-208ENST00000537047 SHANK2Q9UPX8 1470 aa-0.66□□□□□ -2.51
CCDC7-208ENST00000537047 SPENQ96T58 3664 aaKnown RBP-0.66□□□□□ -2.51
CCDC7-208ENST00000537047 SPRR1BP22528 89 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 MYO7BQ6PIF6 2116 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 LSM10Q969L4 123 aaKnown RBP-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 NAA60Q9H7X0 242 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 DYNLRB1Q9NP97 96 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 LINC01558Q9Y6Z2 57 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 KIF21AQ7Z4S6 1674 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 DNAH8Q96JB1 4490 aa-0.66□□□□□ -2.52
CCDC7-208ENST00000537047 LRBAP50851 2863 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 CMYA5Q8N3K9 4069 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 ZZEF1O43149 2961 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 TRBV7-3A0A075B6L6 115 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 LOC285095A0A1B0GVY8 99 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 LOC730098B7Z3J9 87 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 SELENOWP63302 87 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 PPP3R2Q96LZ3 170 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 LINC00846Q9NV44 126 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 DNAH11Q96DT5 4516 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 LRRK2Q5S007 2527 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 WDFY4Q6ZS81 3184 aa-0.67□□□□□ -2.52
CCDC7-208ENST00000537047 TRANK1O15050 2925 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 MGAQ8IWI9 3026 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 IGLC7A0M8Q6 106 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 SPINK4O60575 86 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 DEFB123Q8N688 67 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 GVINP1Q7Z2Y8 2422 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 TSC2P49815 1807 aa-0.68□□□□□ -2.52
CCDC7-208ENST00000537047 CNOT1A5YKK6 2376 aaKnown RBP-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 CENPEQ02224 2701 aa-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 SZT2Q5T011 3432 aa-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 ARL11Q969Q4 196 aa-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 SMG1Q96Q15 3661 aaKnown RBP-0.69□□□□□ -2.52
CCDC7-208ENST00000537047 RIMS1Q86UR5 1692 aaKnown RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms