RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 UQCR10Q9UDW1 63 aa-0.69□□□□□ -2.52
CCDC7-207ENST00000535327 FLGP20930 4061 aaPredicted RBP-0.69□□□□□ -2.52
CCDC7-207ENST00000535327 HERC1Q15751 4861 aa-0.69□□□□□ -2.52
CCDC7-207ENST00000535327 BTAF1O14981 1849 aa-0.7□□□□□ -2.52
CCDC7-207ENST00000535327 DNAJC13O75165 2243 aa-0.7□□□□□ -2.52
CCDC7-207ENST00000535327 FXYD6Q9H0Q3 95 aa-0.7□□□□□ -2.52
CCDC7-207ENST00000535327 FLNBO75369 2602 aaKnown RBP-0.7□□□□□ -2.52
CCDC7-207ENST00000535327 PKHD1P08F94 4074 aa-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 WHAMMP3Q1A5X7 153 aa-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 TMEM263Q8WUH6 116 aaKnown RBP-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 C1orf54Q8WWF1 131 aa-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 ARHGEF12Q9NZN5 1544 aa-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 KTN1Q86UP2 1357 aaKnown RBP-0.71□□□□□ -2.52
CCDC7-207ENST00000535327 GAPVD1Q14C86 1478 aa-0.72□□□□□ -2.52
CCDC7-207ENST00000535327 LAMA5O15230 3695 aa-0.72□□□□□ -2.52
CCDC7-207ENST00000535327 CHKB-CPT1BH3BT56 60 aa-0.72□□□□□ -2.52
CCDC7-207ENST00000535327 FAM107BQ9H098 131 aa-0.72□□□□□ -2.52
CCDC7-207ENST00000535327 NXT2Q9NPJ8 142 aaKnown RBP-0.72□□□□□ -2.52
CCDC7-207ENST00000535327 MYOM1P52179 1685 aa-0.72□□□□□ -2.53
CCDC7-207ENST00000535327 MBD5Q9P267 1494 aa-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 FAT1Q14517 4588 aa-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 AKAIN1P0CW23 69 aa-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 KMT2CQ8NEZ4 4911 aaKnown RBP-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 KDM5AP29375 1690 aaKnown RBP-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 NF1P21359 2839 aa-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 SETXQ7Z333 2677 aaKnown RBP-0.73□□□□□ -2.53
CCDC7-207ENST00000535327 TRBV7-4A0A0J9YYF1 115 aa-0.74□□□□□ -2.53
CCDC7-207ENST00000535327 K7EP13 123 aa-0.74□□□□□ -2.53
CCDC7-207ENST00000535327 UBA52P62987 128 aaKnown RBP-0.74□□□□□ -2.53
CCDC7-207ENST00000535327 NBEAL1Q6ZS30 2694 aa-0.75□□□□□ -2.53
CCDC7-207ENST00000535327 M0R2T5 61 aa-0.75□□□□□ -2.53
CCDC7-207ENST00000535327 HMGN1P05114 100 aa-0.75□□□□□ -2.53
CCDC7-207ENST00000535327 IGLC1P0CG04 106 aa-0.75□□□□□ -2.53
CCDC7-207ENST00000535327 CREBBPQ92793 2442 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 UBE2L5PA0A1B0GUS4 154 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 UBE2L3P68036 154 aaKnown RBP-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 C10orf113Q5VZT2 155 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 SPRR4Q96PI1 79 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 NSD3Q9BZ95 1437 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 CNOT1A5YKK6 2376 aaKnown RBP-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 STAB2Q8WWQ8 2551 aa-0.76□□□□□ -2.53
CCDC7-207ENST00000535327 TULP4Q9NRJ4 1543 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 SMG6Q86US8 1419 aaKnown RBP-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 LOC100130705A0A1B0GUX0 176 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 KRTAP19-8Q3LI54 63 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 FDCSPQ8NFU4 85 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 DEFB105AQ8NG35 78 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 PP6455Q8WZ26 134 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 LINC00474Q9P2X8 69 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 ARL2-SNX15V9GYD0 113 aa-0.77□□□□□ -2.53
CCDC7-207ENST00000535327 OOSP1A8MZH6 123 aa-0.78□□□□□ -2.53
CCDC7-207ENST00000535327 C9orf153Q5TBE3 101 aa-0.78□□□□□ -2.53
CCDC7-207ENST00000535327 CDC42SE2Q9NRR3 84 aa-0.78□□□□□ -2.53
CCDC7-207ENST00000535327 IQSEC2Q5JU85 1478 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 SVEP1Q4LDE5 3571 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 SYS1-DBNDD2H3BUS1 97 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 ATP5EP56381 51 aaPredicted RBP-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 KRTAP20-2Q3LI61 65 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 ROBO1Q9Y6N7 1651 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 SHROOM2Q13796 1616 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 TGP01266 2768 aa-0.79□□□□□ -2.54
CCDC7-207ENST00000535327 A2ML1A8K2U0 1454 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 MAGI1Q96QZ7 1491 aaPredicted RBP-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 LINC00959A0A1B0GUT2 108 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 FAM24AA6NFZ4 105 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 F6UZH7 168 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 COX8AP10176 69 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 GNG11P61952 73 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 FAM223AQ8IWN6 122 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 USMG5Q96IX5 58 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 PRO1933Q9H354 126 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 SETBP1Q9Y6X0 1596 aa-0.8□□□□□ -2.54
CCDC7-207ENST00000535327 HERC2O95714 4834 aa-0.81□□□□□ -2.54
CCDC7-207ENST00000535327 KLK9Q2XQG4 91 aa-0.81□□□□□ -2.54
CCDC7-207ENST00000535327 QRICH2Q9H0J4 1663 aa-0.81□□□□□ -2.54
CCDC7-207ENST00000535327 ARHGEF5Q12774 1597 aa-0.82□□□□□ -2.54
CCDC7-207ENST00000535327 SNAPC5O75971 98 aa-0.82□□□□□ -2.54
CCDC7-207ENST00000535327 FAM167A-AS1Q96KT0 104 aa-0.82□□□□□ -2.54
CCDC7-207ENST00000535327 LINC01600Q96MT4 127 aa-0.83□□□□□ -2.54
CCDC7-207ENST00000535327 MANBALQ9NQG1 85 aa-0.83□□□□□ -2.54
CCDC7-207ENST00000535327 KIAA0556O60303 1618 aa-0.83□□□□□ -2.54
CCDC7-207ENST00000535327 HMGXB3Q12766 1538 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 COX6CP09669 75 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 TRAPPC2P0DI81 140 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 TRAPPC2BP0DI82 140 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 SPRR2AP35326 72 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 DPH3P1Q9H4G8 78 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 ROCK2O75116 1388 aaKnown RBP-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 TET3O43151 1660 aa-0.84□□□□□ -2.54
CCDC7-207ENST00000535327 A0A1B0GWA3 101 aa-0.85□□□□□ -2.55
CCDC7-207ENST00000535327 EHBP1L1Q8N3D4 1523 aa-0.85□□□□□ -2.55
CCDC7-207ENST00000535327 KRTAP6-2Q3LI66 62 aa-0.86□□□□□ -2.55
CCDC7-207ENST00000535327 CUL7Q14999 1698 aa-0.86□□□□□ -2.55
CCDC7-207ENST00000535327 SETD2Q9BYW2 2564 aaPredicted RBP-0.86□□□□□ -2.55
CCDC7-207ENST00000535327 PCLOQ9Y6V0 5065 aa-0.86□□□□□ -2.55
CCDC7-207ENST00000535327 MXRA5Q9NR99 2828 aa-0.86□□□□□ -2.55
CCDC7-207ENST00000535327 NAP1L6A6NFF2 107 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 Q0VG73 95 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 RPL13AP3Q6NVV1 102 aa-0.87□□□□□ -2.55
CCDC7-207ENST00000535327 SVBPQ8N300 66 aa-0.87□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms