RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
PCDHA4-203ENST00000530339 IGLV2-18A0A075B6J9 118 aa11.27□□□□□ -0.61
PCDHA4-203ENST00000530339 Q6ZQY7 126 aa11.27□□□□□ -0.61
PCDHA4-203ENST00000530339 CCKP06307 115 aa11.26□□□□□ -0.61
PCDHA4-203ENST00000530339 H0Y9J4 135 aa11.26□□□□□ -0.61
PCDHA4-203ENST00000530339 SYCNQ0VAF6 134 aa11.26□□□□□ -0.61
PCDHA4-203ENST00000530339 A0A087WZ39 114 aa11.26□□□□□ -0.61
PCDHA4-203ENST00000530339 LINC01006Q8NI28 216 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 DHRS4-AS1Q9P1J3 65 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 PTPRSQ13332 1948 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 M0R378 163 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 Q8IZM0 81 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 HIGD2AQ9BW72 106 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 CDC42SE2Q9NRR3 84 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 LINC00242Q5T6M2 205 aa11.25□□□□□ -0.61
PCDHA4-203ENST00000530339 LINC00959A0A1B0GUT2 108 aa11.24□□□□□ -0.61
PCDHA4-203ENST00000530339 CCDC168Q8NDH2 2452 aa11.24□□□□□ -0.61
PCDHA4-203ENST00000530339 CPAMD8Q8IZJ3 1885 aa11.24□□□□□ -0.61
PCDHA4-203ENST00000530339 LINC00694P0DN24 101 aa11.23□□□□□ -0.61
PCDHA4-203ENST00000530339 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 CHCHD7Q9BUK0 85 aa11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 TLN1Q9Y490 2541 aaKnown RBP11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 PRM2P04554 102 aa11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 FAM19A3Q7Z5A8 133 aa11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 SNURFQ9Y675 71 aa11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 BBC3Q96PG8 261 aaPredicted RBP11.22□□□□□ -0.61
PCDHA4-203ENST00000530339 LRCOL1A6NCL2 159 aa11.21□□□□□ -0.61
PCDHA4-203ENST00000530339 SEC61GP60059 68 aa11.21□□□□□ -0.61
PCDHA4-203ENST00000530339 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.21□□□□□ -0.61
PCDHA4-203ENST00000530339 LINC00526Q96FQ7 95 aa11.21□□□□□ -0.61
PCDHA4-203ENST00000530339 SMIM1B2RUZ4 78 aa11.21□□□□□ -0.62
PCDHA4-203ENST00000530339 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.62
PCDHA4-203ENST00000530339 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.62
PCDHA4-203ENST00000530339 ZNF706Q9Y5V0 76 aaPredicted RBP11.21□□□□□ -0.62
PCDHA4-203ENST00000530339 LINC00482Q8N8I6 264 aa11.2□□□□□ -0.62
PCDHA4-203ENST00000530339 LOC100131303A0A0U1RQF7 123 aa11.2□□□□□ -0.62
PCDHA4-203ENST00000530339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.2□□□□□ -0.62
PCDHA4-203ENST00000530339 C1orf158Q8N1D5 194 aa11.19□□□□□ -0.62
PCDHA4-203ENST00000530339 AMELXQ99217 191 aa11.19□□□□□ -0.62
PCDHA4-203ENST00000530339 CSDC2Q9Y534 153 aaKnown RBP11.19□□□□□ -0.62
PCDHA4-203ENST00000530339 M0QXV9 152 aa11.19□□□□□ -0.62
PCDHA4-203ENST00000530339 LY6G6CO95867 125 aa11.19□□□□□ -0.62
PCDHA4-203ENST00000530339 ADAMTSL4-AS1Q5T5F5 129 aa11.18□□□□□ -0.62
PCDHA4-203ENST00000530339 A0A0U1RQV1 116 aa11.18□□□□□ -0.62
PCDHA4-203ENST00000530339 SPTSSBQ8NFR3 76 aa11.18□□□□□ -0.62
PCDHA4-203ENST00000530339 C3orf84H3BNL1 204 aa11.18□□□□□ -0.62
PCDHA4-203ENST00000530339 NUPR2A6NF83 97 aa11.17□□□□□ -0.62
PCDHA4-203ENST00000530339 V9GYY9 64 aa11.16□□□□□ -0.62
PCDHA4-203ENST00000530339 NTM-AS1Q6ZSK4 140 aa11.16□□□□□ -0.62
PCDHA4-203ENST00000530339 LINC00474Q9P2X8 69 aa11.16□□□□□ -0.62
PCDHA4-203ENST00000530339 SVIPQ8NHG7 77 aa11.16□□□□□ -0.62
PCDHA4-203ENST00000530339 IGF2RP11717 2491 aa11.16□□□□□ -0.62
PCDHA4-203ENST00000530339 ABCA2Q9BZC7 2435 aa11.15□□□□□ -0.62
PCDHA4-203ENST00000530339 IGKV4-1P06312 121 aa11.15□□□□□ -0.62
PCDHA4-203ENST00000530339 CDIP1Q9H305 208 aa11.15□□□□□ -0.62
PCDHA4-203ENST00000530339 KPRPQ5T749 579 aaPredicted RBP11.15□□□□□ -0.62
PCDHA4-203ENST00000530339 F8WDY8 70 aa11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 SMIM26A0A096LP01 95 aa11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 LOC107984640A0A0U1RRK4 108 aa11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 TRAV7A0A075B6U4 112 aa11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 ZNF73O43830 326 aaPredicted RBP11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 C18orf65Q6ZTR6 163 aa11.14□□□□□ -0.63
PCDHA4-203ENST00000530339 A0A087WVE0 104 aa11.13□□□□□ -0.63
PCDHA4-203ENST00000530339 EDN2P20800 178 aa11.13□□□□□ -0.63
PCDHA4-203ENST00000530339 COX6A2Q02221 97 aa11.13□□□□□ -0.63
PCDHA4-203ENST00000530339 ODF3L2Q3SX64 289 aa11.13□□□□□ -0.63
PCDHA4-203ENST00000530339 LINC01546A6NGU7 62 aa11.12□□□□□ -0.63
PCDHA4-203ENST00000530339 BEAN1Q3B7T3 259 aa11.12□□□□□ -0.63
PCDHA4-203ENST00000530339 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
PCDHA4-203ENST00000530339 Q8N814 137 aa11.12□□□□□ -0.63
PCDHA4-203ENST00000530339 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 WFDC10AQ9H1F0 79 aa11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 C16orf95Q9H693 158 aa11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 CASC2Q6XLA1 102 aa11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 WFDC10BQ8IUB3 73 aa11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 IGLV1-51P01701 117 aa11.11□□□□□ -0.63
PCDHA4-203ENST00000530339 IGKV2-28A0A075B6P5 120 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 IGKV2D-28P01615 120 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 FAM19A5Q7Z5A7 132 aaPredicted RBP11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 A0A087WYN8 130 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 EGFEM1PQ0D2K5 195 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 AGRNO00468 2067 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 A0A096LNI7 61 aa11.1□□□□□ -0.63
PCDHA4-203ENST00000530339 SERP1Q9Y6X1 66 aa11.09□□□□□ -0.63
PCDHA4-203ENST00000530339 NCOR2Q9Y618 2525 aa11.09□□□□□ -0.63
PCDHA4-203ENST00000530339 AVPP01185 164 aa11.09□□□□□ -0.63
PCDHA4-203ENST00000530339 HRCT1Q6UXD1 115 aa11.09□□□□□ -0.63
PCDHA4-203ENST00000530339 CDSNQ15517 529 aa11.08□□□□□ -0.64
PCDHA4-203ENST00000530339 CYSRT1A8MQ03 144 aa11.08□□□□□ -0.64
PCDHA4-203ENST00000530339 M0R2N4 97 aa11.08□□□□□ -0.64
PCDHA4-203ENST00000530339 EP400Q96L91 3159 aa11.07□□□□□ -0.64
PCDHA4-203ENST00000530339 KIF25-AS1Q9Y6Z4 181 aa11.07□□□□□ -0.64
PCDHA4-203ENST00000530339 TRBV7-7A0A0K0K1E9 115 aa11.06□□□□□ -0.64
PCDHA4-203ENST00000530339 EXPH5Q8NEV8 1989 aa11.06□□□□□ -0.64
PCDHA4-203ENST00000530339 IGHV4-30-4P0DP06 118 aa11.06□□□□□ -0.64
PCDHA4-203ENST00000530339 WFDC13Q8IUB5 93 aa11.05□□□□□ -0.64
PCDHA4-203ENST00000530339 OXLD1Q5BKU9 147 aa11.05□□□□□ -0.64
PCDHA4-203ENST00000530339 IGLV4-60A0A075B6I1 120 aa11.04□□□□□ -0.64
PCDHA4-203ENST00000530339 UNQ6190/PRO20217Q6UXQ8 127 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms