RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 NEXN-AS1Q8NBZ9 246 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 Q8TAT8 98 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 COPS9Q8WXC6 57 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 LINC00467Q9BRT7 94 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 CELA1Q9UNI1 258 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 CSMD3Q7Z407 3707 aa4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 DYNC2H1Q8NCM8 4307 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV9-1A0A075B6T8 112 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 H3BT86 120 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 NPC2P61916 151 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 SRSF9Q13242 221 aaKnown RBP eCLIP4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 FAM222AQ5U5X8 452 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 CFAP126Q5VTH2 177 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 CEMP1Q6PRD7 247 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 Q6ZQT7 251 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 ATP5L2Q7Z4Y8 100 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 TMEM75Q8N9X5 138 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 TMEM263Q8WUH6 116 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 LINC00476Q8WZB0 136 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 C16orf74Q96GX8 76 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 HHLA3Q9XRX5 114 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 TIMM8BQ9Y5J9 83 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 STARD9Q9P2P6 4700 aa4.44□□□□□ -1.7
ATPAF1-209ENST00000529214 IGHV1OR15-1A0A075B7D0 117 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TRBV7-6A0A0J9YX20 115 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 C11orf94C9JXX5 98 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 PEX7O00628 323 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 IGKCP01834 107 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 RIGQ13278 110 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 LGALS9BQ3B8N2 356 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 Q6ZTC4 211 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 PRNTQ86SH4 94 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 C15orf53Q8NAA6 179 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV21A0A0B4J279 112 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TRBV6-1A0A0K0K1D8 114 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 A0A1B0GXF2 115 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 NUPR2A6NF83 97 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 CDK2AP2O75956 126 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TCL1BO95988 128 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 ZNF80P51504 273 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 DAD1P61803 113 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 CENPWQ5EE01 88 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 CEND1Q8N111 149 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 C11orf72Q8NBR9 251 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 C8orf49Q96NF6 230 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TXNDC17Q9BRA2 123 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 Q9HAA7 133 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 NOP10Q9NPE3 64 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 GNG13Q9P2W3 67 aa4.43□□□□□ -1.7
ATPAF1-209ENST00000529214 TRAV10A0A0B4J240 114 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 hADV29S1A0JD25 119 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 CXCL5P42830 114 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 KRTAP19-4Q3LI73 84 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 KTN1-AS1Q86SY8 53 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 C11orf21Q9P2W6 132 aa4.42□□□□□ -1.7
ATPAF1-209ENST00000529214 DEFB131BA0A096LNP1 70 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 IGLL5B9A064 214 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 ATOX1O00244 68 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 GNRH2O43555 120 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 LTAP01374 205 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 CRIP1P50238 77 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 LINC00612Q8N6U2 182 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 POM121L12Q8N7R1 296 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 DPH3P1Q9H4G8 78 aa4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-209ENST00000529214 IGHV1-58A0A0C4DH39 117 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 SPINK4O60575 86 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 APCSP02743 223 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 CACNG7P62955 275 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 LINC01545Q5VT33 79 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 Q86TA4 180 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 TSKUQ8WUA8 353 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 C11orf52Q96A22 123 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 APLNQ9ULZ1 77 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.71
ATPAF1-209ENST00000529214 IGKV3D-20A0A0C4DH25 116 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 IGHV3-16A0A0C4DH30 117 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 NDUFS5O43920 106 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 RPL23P62829 140 aaKnown RBP4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 ORMDL2Q53FV1 153 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 Q6ZTI0 123 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 ZNF575Q86XF7 245 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 TP73-AS1Q9UF72 201 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 DNAH1Q9P2D7 4330 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 LYSTQ99698 3801 aa4.39□□□□□ -1.71
ATPAF1-209ENST00000529214 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 IGHV4-4A0A075B6R2 117 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 TRGV1A0A0A0MS02 117 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 SCGB1C2P0DMR2 95 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 HTN3P15516 51 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 LGALS9CQ6DKI2 356 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 SMIM7Q9BQ49 75 aa4.38□□□□□ -1.71
ATPAF1-209ENST00000529214 TRGV2A0A075B6R0 118 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 IGLV9-49A0A0B4J1Y8 123 aa4.37□□□□□ -1.71
ATPAF1-209ENST00000529214 LCE6AA0A183 80 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms