RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
CAPN1-208ENST00000527323 LINC01600Q96MT4 127 aa9.04□□□□□ -0.96
CAPN1-208ENST00000527323 IGHV3OR16-12A0A075B7B8 117 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 Q6Q795 121 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 UBE2E2Q96LR5 201 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 NOTCH1P46531 2555 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 J3QLI3 93 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 TIMM17BO60830 172 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 IGHV3-53P01767 116 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 COX6A2Q02221 97 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 MEIG1Q5JSS6 88 aa9.03□□□□□ -0.96
CAPN1-208ENST00000527323 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
CAPN1-208ENST00000527323 NDUFA1O15239 70 aa9.02□□□□□ -0.97
CAPN1-208ENST00000527323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
CAPN1-208ENST00000527323 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
CAPN1-208ENST00000527323 LINC00308Q8TCZ7 52 aa9.02□□□□□ -0.97
CAPN1-208ENST00000527323 FSHBP01225 129 aa9.01□□□□□ -0.97
CAPN1-208ENST00000527323 DYNLRB2Q8TF09 96 aa9.01□□□□□ -0.97
CAPN1-208ENST00000527323 DNAJC30Q96LL9 226 aa9.01□□□□□ -0.97
CAPN1-208ENST00000527323 XCL2Q9UBD3 114 aa9.01□□□□□ -0.97
CAPN1-208ENST00000527323 HERVK_113P63121 156 aa9□□□□□ -0.97
CAPN1-208ENST00000527323 NDUFA7O95182 113 aa9□□□□□ -0.97
CAPN1-208ENST00000527323 PRIMA1Q86XR5 153 aa9□□□□□ -0.97
CAPN1-208ENST00000527323 INSP01308 110 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
CAPN1-208ENST00000527323 LINC00242Q5T6M2 205 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 PIK3CD-AS1Q5SR53 167 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 C11orf72Q8NBR9 251 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
CAPN1-208ENST00000527323 MAP6D1Q9H9H5 199 aa8.98□□□□□ -0.97
CAPN1-208ENST00000527323 PEMTQ9UBM1 199 aa8.98□□□□□ -0.97
CAPN1-208ENST00000527323 FAM240AA0A1B0GVK7 77 aa8.98□□□□□ -0.97
CAPN1-208ENST00000527323 COX7A2LO14548 114 aa8.98□□□□□ -0.97
CAPN1-208ENST00000527323 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
CAPN1-208ENST00000527323 RS1O15537 224 aa8.97□□□□□ -0.97
CAPN1-208ENST00000527323 COPS9Q8WXC6 57 aa8.97□□□□□ -0.97
CAPN1-208ENST00000527323 IGLV5-45A0A087WSX0 123 aa8.97□□□□□ -0.97
CAPN1-208ENST00000527323 DEFB121Q5J5C9 76 aa8.97□□□□□ -0.97
CAPN1-208ENST00000527323 NBEAL1Q6ZS30 2694 aa8.97□□□□□ -0.97
CAPN1-208ENST00000527323 Q8N2B8 174 aa8.96□□□□□ -0.97
CAPN1-208ENST00000527323 RPL36AP83881 106 aaKnown RBP8.96□□□□□ -0.98
CAPN1-208ENST00000527323 BEAN1Q3B7T3 259 aa8.96□□□□□ -0.98
CAPN1-208ENST00000527323 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.98
CAPN1-208ENST00000527323 RPL36ALQ969Q0 106 aaKnown RBP8.96□□□□□ -0.98
CAPN1-208ENST00000527323 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.98
CAPN1-208ENST00000527323 IGLV5-39A0A0G2JS06 123 aa8.95□□□□□ -0.98
CAPN1-208ENST00000527323 A8MTW9 85 aa8.95□□□□□ -0.98
CAPN1-208ENST00000527323 SMIM1B2RUZ4 78 aa8.95□□□□□ -0.98
CAPN1-208ENST00000527323 F8WDY8 70 aa8.95□□□□□ -0.98
CAPN1-208ENST00000527323 DAZ2Q13117 558 aaKnown RBP8.94□□□□□ -0.98
CAPN1-208ENST00000527323 DAZ4Q86SG3 579 aaKnown RBP8.94□□□□□ -0.98
CAPN1-208ENST00000527323 C3orf56Q8N813 242 aa8.94□□□□□ -0.98
CAPN1-208ENST00000527323 DAZ3Q9NR90 486 aaKnown RBP8.94□□□□□ -0.98
CAPN1-208ENST00000527323 STHQ8IWL8 128 aa8.94□□□□□ -0.98
CAPN1-208ENST00000527323 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
CAPN1-208ENST00000527323 IGKV3OR2-268A0A0C4DH90 116 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 ACYP1P07311 99 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 DEFB114Q30KQ6 69 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 FAM236AA0A1B0GUQ0 79 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 FAM236BA0A1B0GV22 79 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 UBE2L6O14933 153 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 LINC01006Q8NI28 216 aa8.93□□□□□ -0.98
CAPN1-208ENST00000527323 TOMM7Q9P0U1 55 aa8.92□□□□□ -0.98
CAPN1-208ENST00000527323 TRBV7-7A0A0K0K1E9 115 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 NTM-AS1Q6ZSK4 140 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 Q6ZTI0 123 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 SPATA3Q8NHX4 192 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 K7EQD1 137 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 Q9HAA7 133 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 HERV-K104P63124 156 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 CDC42SE2Q9NRR3 84 aa8.91□□□□□ -0.98
CAPN1-208ENST00000527323 TRACP01848 142 aa8.9□□□□□ -0.98
CAPN1-208ENST00000527323 C1orf158Q8N1D5 194 aa8.9□□□□□ -0.98
CAPN1-208ENST00000527323 GAGE2AQ6NT46 116 aa8.9□□□□□ -0.99
CAPN1-208ENST00000527323 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.99
CAPN1-208ENST00000527323 MGAM2Q2M2H8 2515 aa8.9□□□□□ -0.99
CAPN1-208ENST00000527323 CRPP02741 224 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 LINC00643Q86TS7 51 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 C4orf3Q8WVX3 66 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 TRBV10-1A0A0K0K1A3 114 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 SMCR5Q8TEV8 140 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
CAPN1-208ENST00000527323 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
CAPN1-208ENST00000527323 CSDC2Q9Y534 153 aaKnown RBP8.89□□□□□ -0.99
CAPN1-208ENST00000527323 ZNF561-AS1K7EIQ3 104 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 LINC00158P58513 81 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 ODF3L2Q3SX64 289 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 TRAV13-2A0A0B4J235 113 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 F5H768 121 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 KRTAP10-3P60369 221 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
CAPN1-208ENST00000527323 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
CAPN1-208ENST00000527323 DNAL4O96015 105 aa8.87□□□□□ -0.99
CAPN1-208ENST00000527323 IMUPQ9GZP8 106 aa8.87□□□□□ -0.99
CAPN1-208ENST00000527323 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
CAPN1-208ENST00000527323 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
CAPN1-208ENST00000527323 MALP21145 153 aa8.86□□□□□ -0.99
CAPN1-208ENST00000527323 FAM19A3Q7Z5A8 133 aa8.86□□□□□ -0.99
CAPN1-208ENST00000527323 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms