RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NEGR1Q7Z3B1 354 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 C15orf53Q8NAA6 179 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 ATP6V0E2Q8NHE4 81 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 TYMSOSQ8TAI1 123 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 RPL39LQ96EH5 51 aaKnown RBP3.03□□□□□ -1.92
USP48-211ENST00000526044 C20orf78Q9BR46 151 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 ST20Q9HBF5 79 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 SPANXB1Q9NS25 103 aaPredicted RBP3.03□□□□□ -1.92
USP48-211ENST00000526044 LAMTOR2Q9Y2Q5 125 aa3.03□□□□□ -1.92
USP48-211ENST00000526044 TRBV6-5A0A0K0K1A5 114 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 LOC389332A0A1B0GUA5 103 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 SDHAF1A6NFY7 115 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 C3orf84H3BNL1 204 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 I3L3M4 83 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 NCR2O95944 276 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 NPYP01303 97 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 SRIP30626 198 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 POLR2KP53803 58 aaKnown RBP3.02□□□□□ -1.93
USP48-211ENST00000526044 UBE2D3P61077 147 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 UBE2D2P62837 147 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 RBX1P62877 108 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 ESRGQ1W209 222 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 TMEM97Q5BJF2 176 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 LYPD5Q6UWN5 251 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 DAZ4Q86SG3 579 aaKnown RBP3.02□□□□□ -1.93
USP48-211ENST00000526044 GTSF1LQ9H1H1 148 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 DAZ3Q9NR90 486 aaKnown RBP3.02□□□□□ -1.93
USP48-211ENST00000526044 APLNQ9ULZ1 77 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 PRKDCP78527 4128 aaKnown RBP3.02□□□□□ -1.93
USP48-211ENST00000526044 COL7A1Q02388 2944 aa3.02□□□□□ -1.93
USP48-211ENST00000526044 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 TCAPO15273 167 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 IFI27P40305 119 aaPredicted RBP3.01□□□□□ -1.93
USP48-211ENST00000526044 CCL18P55774 89 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 RAB5BP61020 215 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 CASC10Q5T4H9 136 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 MRPL55Q7Z7F7 128 aaKnown RBP3.01□□□□□ -1.93
USP48-211ENST00000526044 NIT1Q86X76 327 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 C6orf223Q8N319 242 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 Q8N8P6 123 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 CHCHD10Q8WYQ3 142 aaPredicted RBP3.01□□□□□ -1.93
USP48-211ENST00000526044 TMEM70Q9BUB7 260 aa3.01□□□□□ -1.93
USP48-211ENST00000526044 TRBV25-1A0A075B6N4 114 aa3□□□□□ -1.93
USP48-211ENST00000526044 TRBV6-8A0A0A6YYG3 113 aa3□□□□□ -1.93
USP48-211ENST00000526044 TRAV8-6A0A0B4J262 113 aa3□□□□□ -1.93
USP48-211ENST00000526044 IGHV1-24A0A0C4DH33 117 aa3□□□□□ -1.93
USP48-211ENST00000526044 TRBV27A0A0K0K1C4 114 aa3□□□□□ -1.93
USP48-211ENST00000526044 A8MU10 97 aa3□□□□□ -1.93
USP48-211ENST00000526044 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
USP48-211ENST00000526044 TMEM262E9PQX1 116 aa3□□□□□ -1.93
USP48-211ENST00000526044 K7EMI3 77 aa3□□□□□ -1.93
USP48-211ENST00000526044 LINC00614P0C842 121 aa3□□□□□ -1.93
USP48-211ENST00000526044 ESDP10768 282 aa3□□□□□ -1.93
USP48-211ENST00000526044 FCER1GP30273 86 aa3□□□□□ -1.93
USP48-211ENST00000526044 Q0VG73 95 aa3□□□□□ -1.93
USP48-211ENST00000526044 C1orf195Q5TG92 126 aa3□□□□□ -1.93
USP48-211ENST00000526044 KRTAP5-2Q701N4 177 aa3□□□□□ -1.93
USP48-211ENST00000526044 FA2HQ7L5A8 372 aa3□□□□□ -1.93
USP48-211ENST00000526044 BAGE3Q86Y29 109 aa3□□□□□ -1.93
USP48-211ENST00000526044 UBE2DNLQ8IWF7 75 aa3□□□□□ -1.93
USP48-211ENST00000526044 SMIM20Q8N5G0 67 aa3□□□□□ -1.93
USP48-211ENST00000526044 C18orf32Q8TCD1 76 aa3□□□□□ -1.93
USP48-211ENST00000526044 DEFB104AQ8WTQ1 72 aa3□□□□□ -1.93
USP48-211ENST00000526044 SMIM2Q9BVW6 85 aa3□□□□□ -1.93
USP48-211ENST00000526044 NXT2Q9NPJ8 142 aaKnown RBP3□□□□□ -1.93
USP48-211ENST00000526044 IGLV2-18A0A075B6J9 118 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 A6NDN8 102 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 UBE2L6O14933 153 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 DNAH10OSP0CZ25 163 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 LINC00694P0DN24 101 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 IQCJQ1A5X6 159 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 ORMDL2Q53FV1 153 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 LELP1Q5T871 98 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 NTM-AS1Q6ZSK4 140 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 SIGMAR1Q99720 223 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 TMEM243Q9BU79 118 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 LINC00588Q9Y4M8 146 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 TENM3Q9P273 2699 aa2.99□□□□□ -1.93
USP48-211ENST00000526044 TRAV9-2A0A087WT02 112 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 A0A087WX48 190 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BKO60814 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 LY6G6CO95867 125 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BJP06899 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 KRTAP1-4P0C5Y4 121 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BOP23527 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BBP33778 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 NDUFA6P56556 154 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 PKIAP61925 76 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
USP48-211ENST00000526044 LGALS9CQ6DKI2 356 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 C20orf203Q8NBC4 194 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 CHCHD1Q96BP2 118 aaKnown RBP2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 CHCHD7Q9BUK0 85 aa2.98□□□□□ -1.93
USP48-211ENST00000526044 PRO0628Q9UI54 55 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms