RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 VAMP8Q9BV40 100 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 C11orf68Q9H3H3 251 aaKnown RBP2.17□□□□□ -2.06
CD44-219ENST00000525685 PKIGQ9Y2B9 76 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 SORL1Q92673 2214 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 RYR2Q92736 4967 aa2.17□□□□□ -2.06
CD44-219ENST00000525685 A0A0U1RQV1 116 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 GGTLC3B5MD39 225 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 CCDC179H3BU77 68 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 TAX1BP3O14907 124 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 DEFB4AO15263 64 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 NDUFC2O95298 119 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 CXorf1O96002 111 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 SPINK8P0C7L1 97 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 SEC11BP0C7V7 166 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 LINC00694P0DN24 101 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 MIFP14174 115 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 RPL18AQ02543 176 aaKnown RBP2.16□□□□□ -2.06
CD44-219ENST00000525685 PMAIP1Q13794 54 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 TDRG1Q3Y452 100 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 IBA57Q5T440 356 aaKnown RBP2.16□□□□□ -2.06
CD44-219ENST00000525685 PRR9Q5T870 116 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 Q8TAT8 98 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 MUC7Q8TAX7 377 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 FAM19A4Q96LR4 140 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 IMMP2LQ96T52 175 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 AGPAT4-IT1Q9H0P7 198 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 OTORQ9NRC9 128 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 ALMS1Q8TCU4 4167 aa2.16□□□□□ -2.06
CD44-219ENST00000525685 PLECQ15149 4684 aaKnown RBP2.16□□□□□ -2.06
CD44-219ENST00000525685 DYNC2H1Q8NCM8 4307 aaKnown RBP2.15□□□□□ -2.06
CD44-219ENST00000525685 NBEAL2Q6ZNJ1 2754 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 TRAV8-1A0A0A6YYK1 113 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 LOC107984640A0A0U1RRK4 108 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 FAM240AA0A1B0GVK7 77 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 RBAKDNA6NC62 111 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 PGPA6NDG6 321 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 A6NDN8 102 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 UMAD1C9J7I0 102 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 NDUFC2-KCTD14E9PQ53 114 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 C3orf84H3BNL1 204 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 K7EP34 96 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 NCR2O95944 276 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 TCRAP04437 139 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 PRM2P04554 102 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 SLC25A5P05141 298 aaKnown RBP2.15□□□□□ -2.07
CD44-219ENST00000525685 IGLC6P0CF74 106 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 TSPOP30536 169 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 CSN1S1P47710 185 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 MEIG1Q5JSS6 88 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 Q5XG85 94 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 AMMECR1LQ6DCA0 310 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 MRPL54Q6P161 138 aaKnown RBP2.15□□□□□ -2.07
CD44-219ENST00000525685 HRCT1Q6UXD1 115 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 DPPA3Q6W0C5 159 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 Q6ZQT7 251 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 ZFAND2AQ8N6M9 145 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 CMTM2Q8TAZ6 248 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 FAM213BQ8TBF2 198 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 LINC01587Q99440 93 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 TMEM191AQ9H0A3 160 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 TMEM167BQ9NRX6 74 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 ZNF492Q9P255 531 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 LAMTOR3Q9UHA4 124 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.07
CD44-219ENST00000525685 SACSQ9NZJ4 4579 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 A0A087WWC5 75 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 TRAV12-3A0A0B4J271 114 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 C7orf77A4D0Y5 90 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 DPM2O94777 84 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 TRGC1P0CF51 173 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 IGLC3P0DOY3 106 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 IFITM1P13164 125 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 ATP5G3P48201 142 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 RPL23P62829 140 aaKnown RBP2.14□□□□□ -2.07
CD44-219ENST00000525685 RRN3P1Q2M238 152 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 C12orf74Q32Q52 190 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 FAM222AQ5U5X8 452 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 Q6AWC8 147 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 Q86TA4 180 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 TMEM75Q8N9X5 138 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 C11orf72Q8NBR9 251 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 NUP35Q8NFH5 326 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 TMEM263Q8WUH6 116 aaKnown RBP2.14□□□□□ -2.07
CD44-219ENST00000525685 TVP23CQ96ET8 276 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 NAA38Q9BRA0 125 aaKnown RBP2.14□□□□□ -2.07
CD44-219ENST00000525685 ARL2-SNX15V9GYD0 113 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 TGP01266 2768 aa2.14□□□□□ -2.07
CD44-219ENST00000525685 RYR3Q15413 4870 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 DNAH1Q9P2D7 4330 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 SMIM26A0A096LP01 95 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 TRAV10A0A0B4J240 114 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 TRAV1-1A0A0B4J248 108 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 TRAV26-2A0A0B4J265 109 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 SPART-AS1P0CW21 52 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 P0DMU3 169 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 FAM231AP0DMU4 169 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 FAM231CP0DMU5 169 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 BCL2P10415 239 aa2.13□□□□□ -2.07
CD44-219ENST00000525685 FGF6P10767 208 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms