RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 ZFAND6Q6FIF0 208 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 Q6ZUT4 128 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 TEN1Q86WV5 123 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 B9D2Q9BPU9 175 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 PRADC1Q9BSG0 188 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 DPH3P1Q9H4G8 78 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 PHLDA3Q9Y5J5 127 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 ZNF292O60281 2723 aa2.98□□□□□ -1.93
SKP1-213ENST00000524288 FREM2Q5SZK8 3169 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 TRBV7-1A0A0A6YYK4 115 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 A0A0J9YX75 114 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 A0A0J9YY99 117 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 TRBV6-5A0A0K0K1A5 114 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 C11orf86A6NJI1 115 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 C19orf84I3L1E1 186 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 INSL3P51460 131 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 EFNA4P52798 201 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 Q6Q795 121 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 Q6ZQT7 251 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 VMO1Q7Z5L0 202 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 ZFAND2AQ8N6M9 145 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 TMEM141Q96I45 108 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 CARD19Q96LW7 228 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 SCGB3A1Q96QR1 104 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 AMELXQ99217 191 aa2.97□□□□□ -1.93
SKP1-213ENST00000524288 VPS13AQ96RL7 3174 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 TRAV26-2A0A0B4J265 109 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 TRAV21A0A0B4J279 112 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 IGIPA6NJ69 53 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 FAM223BA6NKX1 122 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 ZNF815PA8K554 130 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 TMEM262E9PQX1 116 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 H3BVH4 76 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 OVOL1O14753 267 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 IGLV6-57P01721 117 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 IGHV1-69P01742 117 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 CRYGDP07320 174 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 P0DMU3 169 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 FAM231AP0DMU4 169 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 FAM231CP0DMU5 169 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 ASIPP42127 132 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 POLR2KP53803 58 aaKnown RBP2.96□□□□□ -1.94
SKP1-213ENST00000524288 SPANXN1Q5VSR9 72 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 AMTNQ6UX39 209 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 NDUFA11Q86Y39 141 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 GPHB5Q86YW7 130 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 FAM223AQ8IWN6 122 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 C10orf126Q8N4M7 172 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 MUC7Q8TAX7 377 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 ERG28Q9UKR5 140 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 UFC1Q9Y3C8 167 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 MYO15AQ9UKN7 3530 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 PRRC2CQ9Y520 2896 aaKnown RBP2.96□□□□□ -1.94
SKP1-213ENST00000524288 ROS1P08922 2347 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 CACNA1BQ00975 2339 aa2.96□□□□□ -1.94
SKP1-213ENST00000524288 ANKHD1Q8IWZ3 2542 aaKnown RBP2.95□□□□□ -1.94
SKP1-213ENST00000524288 PIEZO1Q92508 2521 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 APC2O95996 2303 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 ACACAQ13085 2346 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 SDHAF1A6NFY7 115 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 A8MWV9 139 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 H3BUA1 57 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 TCL1BO95988 128 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 MT-ATP8P03928 68 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 SPINK8P0C7L1 97 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 TSPEAR-AS2P59090 65 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 RHOHQ15669 191 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 C3orf22Q8N5N4 141 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 PLEKHB2Q96CS7 222 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 ODF3Q96PU9 254 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
SKP1-213ENST00000524288 PCNX1Q96RV3 2341 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 PTPRQQ9UMZ3 2332 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 DMXL1Q9Y485 3027 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 TRBV27A0A0K0K1C4 114 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 LYNX1G3V0Z9 82 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 NDUFA4O00483 81 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 LECT2O14960 151 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 LEPROTO15243 131 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 IGHV3-33P01772 117 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 LYNX1P0DP58 116 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 RNASE3P12724 160 aaKnown RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 RNASE4P34096 147 aaKnown RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 PRB3Q04118 309 aaPredicted RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 HES1Q14469 280 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 DEFB121Q5J5C9 76 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 ANKRD29Q8N6D5 301 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 TMEM263Q8WUH6 116 aaKnown RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 RPL39LQ96EH5 51 aaKnown RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 TM2D3Q9BRN9 247 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 PRO1854Q9UHT4 67 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 LINC00588Q9Y4M8 146 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 ABCA2Q9BZC7 2435 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 ANKRD11Q6UB99 2663 aaPredicted RBP2.94□□□□□ -1.94
SKP1-213ENST00000524288 DMDP11532 3685 aa2.94□□□□□ -1.94
SKP1-213ENST00000524288 ZZEF1O43149 2961 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 SPTBN2O15020 2390 aa2.93□□□□□ -1.94
SKP1-213ENST00000524288 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms