RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 HIST2H2BCQ6DN03 193 aa7.33□□□□□ -1.24
SPIDR-224ENST00000524126 HIST2H2BDQ6DRA6 164 aa7.33□□□□□ -1.24
SPIDR-224ENST00000524126 LINC00337Q8N6G1 96 aa7.33□□□□□ -1.24
SPIDR-224ENST00000524126 BRK1Q8WUW1 75 aa7.33□□□□□ -1.24
SPIDR-224ENST00000524126 ZNF469Q96JG9 3925 aaPredicted RBP7.33□□□□□ -1.24
SPIDR-224ENST00000524126 IGHV3-11P01762 117 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 C11orf71Q6IPW1 123 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 TENM4Q6N022 2769 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 FASNP49327 2511 aaKnown RBP7.32□□□□□ -1.24
SPIDR-224ENST00000524126 UBR5O95071 2799 aaPredicted RBP7.32□□□□□ -1.24
SPIDR-224ENST00000524126 LECT2O14960 151 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 OBSCN-AS1Q96MR7 158 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 SNURFQ9Y675 71 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 V9GYY9 64 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 ZANQ9Y493 2812 aa7.32□□□□□ -1.24
SPIDR-224ENST00000524126 HTN1P15515 57 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 ABCA2Q9BZC7 2435 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 PTPN13Q12923 2485 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 CRPP02741 224 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 SMIM11BQ8TCY0 68 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 Q6ZSN1 163 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 MIR7-3HGQ8N6C7 128 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 RMI2Q96E14 147 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 RHPN1-AS1Q9BWJ2 59 aa7.31□□□□□ -1.24
SPIDR-224ENST00000524126 IGKV2-28A0A075B6P5 120 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 IGLV5-39A0A0G2JS06 123 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 IGKV2D-28P01615 120 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 PRM2P04554 102 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 ZNF843Q8N446 348 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 DOPEY2Q9Y3R5 2298 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 USP9YO00507 2555 aaPredicted RBP7.3□□□□□ -1.24
SPIDR-224ENST00000524126 SMIM1B2RUZ4 78 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 SPINK13Q1W4C9 94 aa7.3□□□□□ -1.24
SPIDR-224ENST00000524126 SETXQ7Z333 2677 aaKnown RBP7.29□□□□□ -1.24
SPIDR-224ENST00000524126 SORL1Q92673 2214 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 IGHV3OR16-12A0A075B7B8 117 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 IGHV1OR15-1A0A075B7D0 117 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 IGLV5-45A0A087WSX0 123 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 KLK9Q2XQG4 91 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 SS18Q15532 418 aa7.29□□□□□ -1.24
SPIDR-224ENST00000524126 SMIM26A0A096LP01 95 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 LINC00242Q5T6M2 205 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 TRAV13-2A0A0B4J235 113 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 F8WEM9 126 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 CCKP06307 115 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 COPS9Q8WXC6 57 aa7.28□□□□□ -1.24
SPIDR-224ENST00000524126 NDUFA4O00483 81 aa7.27□□□□□ -1.25
SPIDR-224ENST00000524126 ZFP36P26651 326 aaKnown RBP7.27□□□□□ -1.25
SPIDR-224ENST00000524126 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
SPIDR-224ENST00000524126 LINC00482Q8N8I6 264 aa7.27□□□□□ -1.25
SPIDR-224ENST00000524126 C11orf72Q8NBR9 251 aa7.27□□□□□ -1.25
SPIDR-224ENST00000524126 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
SPIDR-224ENST00000524126 DGAT2L7PQ6IED9 249 aa7.27□□□□□ -1.25
SPIDR-224ENST00000524126 ANKRD17O75179 2603 aaKnown RBP7.27□□□□□ -1.25
SPIDR-224ENST00000524126 BPESC1Q9GZL8 116 aa7.26□□□□□ -1.25
SPIDR-224ENST00000524126 TRBV7-6A0A0J9YX20 115 aa7.26□□□□□ -1.25
SPIDR-224ENST00000524126 RBM3P98179 157 aaKnown RBP7.26□□□□□ -1.25
SPIDR-224ENST00000524126 SND1-IT1Q9HBX3 110 aa7.26□□□□□ -1.25
SPIDR-224ENST00000524126 OVOL2Q9BRP0 275 aa7.25□□□□□ -1.25
SPIDR-224ENST00000524126 MINOS1-NBL1R4GNA1 71 aa7.25□□□□□ -1.25
SPIDR-224ENST00000524126 TRAV10A0A0B4J240 114 aa7.25□□□□□ -1.25
SPIDR-224ENST00000524126 HELZ2Q9BYK8 2649 aaKnown RBP7.24□□□□□ -1.25
SPIDR-224ENST00000524126 C5orf56Q8N8D9 126 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 SAA4P35542 130 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 FAM229BQ4G0N7 80 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 Q6ZTI0 123 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 MPLKIPQ8TAP9 179 aa7.24□□□□□ -1.25
SPIDR-224ENST00000524126 CSPG4Q6UVK1 2322 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 KRTAP10-9P60411 292 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 Q96MF0 132 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.23□□□□□ -1.259e-7■■■■■ 29.4
SPIDR-224ENST00000524126 CUBNO60494 3623 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 APCP25054 2843 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 PF4P02776 101 aa7.23□□□□□ -1.25
SPIDR-224ENST00000524126 H0YGX0 51 aa7.22□□□□□ -1.25
SPIDR-224ENST00000524126 ATP5EP2Q5VTU8 51 aa7.22□□□□□ -1.25
SPIDR-224ENST00000524126 KLKP1Q107X0 134 aa7.22□□□□□ -1.25
SPIDR-224ENST00000524126 S100A7L2Q5SY68 101 aa7.22□□□□□ -1.25
SPIDR-224ENST00000524126 MAPK1IP1LQ8NDC0 245 aa7.22□□□□□ -1.25
SPIDR-224ENST00000524126 RNASE1P07998 156 aaKnown RBP7.21□□□□□ -1.25
SPIDR-224ENST00000524126 CCL18P55774 89 aa7.21□□□□□ -1.25
SPIDR-224ENST00000524126 C19orf54Q5BKX5 351 aa7.21□□□□□ -1.25
SPIDR-224ENST00000524126 IL17DQ8TAD2 202 aa7.21□□□□□ -1.25
SPIDR-224ENST00000524126 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.25
SPIDR-224ENST00000524126 CCDC168Q8NDH2 2452 aa7.21□□□□□ -1.26
SPIDR-224ENST00000524126 TLN2Q9Y4G6 2542 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 LINC00158P58513 81 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 CCL19Q99731 98 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 SIRPDQ9H106 197 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 NAV2Q8IVL1 2488 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 IGHV4-61A0A0C4DH41 118 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 BLCAPP62952 87 aa7.2□□□□□ -1.26
SPIDR-224ENST00000524126 IGHV4-30-2A0A087WSY4 118 aa7.19□□□□□ -1.26
SPIDR-224ENST00000524126 M0R2N4 97 aa7.19□□□□□ -1.26
SPIDR-224ENST00000524126 LMO4P61968 165 aa7.19□□□□□ -1.26
SPIDR-224ENST00000524126 UBL5Q9BZL1 73 aa7.19□□□□□ -1.26
SPIDR-224ENST00000524126 MAST4O15021 2626 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms