RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 CMYA5Q8N3K9 4069 aa18.02■□□□□ 0.48
COL13A1-214ENST00000522165 LITAFQ99732 161 aa18.02■□□□□ 0.47
COL13A1-214ENST00000522165 SMIM1B2RUZ4 78 aa18.01■□□□□ 0.47
COL13A1-214ENST00000522165 SPCS1Q9Y6A9 102 aa18.01■□□□□ 0.47
COL13A1-214ENST00000522165 F5H768 121 aa18■□□□□ 0.47
COL13A1-214ENST00000522165 RBX1P62877 108 aa18■□□□□ 0.47
COL13A1-214ENST00000522165 A0A096LPF7 62 aa17.99■□□□□ 0.47
COL13A1-214ENST00000522165 NDUFA1O15239 70 aa17.99■□□□□ 0.47
COL13A1-214ENST00000522165 APOMO95445 188 aa17.97■□□□□ 0.47
COL13A1-214ENST00000522165 MUSTN1Q8IVN3 82 aa17.97■□□□□ 0.47
COL13A1-214ENST00000522165 CFC1BP0CG36 223 aa17.96■□□□□ 0.47
COL13A1-214ENST00000522165 CFC1P0CG37 223 aa17.96■□□□□ 0.47
COL13A1-214ENST00000522165 C21orf62-AS1Q17RA5 79 aa17.96■□□□□ 0.47
COL13A1-214ENST00000522165 PGPEP1Q9NXJ5 209 aa17.96■□□□□ 0.47
COL13A1-214ENST00000522165 TRAV26-1A0A087WT03 109 aa17.95■□□□□ 0.46
COL13A1-214ENST00000522165 IGKV3OR2-268A0A0C4DH90 116 aa17.95■□□□□ 0.46
COL13A1-214ENST00000522165 RPL24P83731 157 aaKnown RBP17.95■□□□□ 0.46
COL13A1-214ENST00000522165 ADAMTSL4-AS1Q5T5F5 129 aa17.95■□□□□ 0.46
COL13A1-214ENST00000522165 SPANXDQ9BXN6 97 aa17.95■□□□□ 0.46
COL13A1-214ENST00000522165 SPANXCQ9NY87 97 aa17.95■□□□□ 0.46
COL13A1-214ENST00000522165 A0A1B0GUV1 79 aa17.94■□□□□ 0.46
COL13A1-214ENST00000522165 A4D1N5 150 aa17.94■□□□□ 0.46
COL13A1-214ENST00000522165 TMEM262E9PQX1 116 aa17.93■□□□□ 0.46
COL13A1-214ENST00000522165 TIMM17BO60830 172 aa17.93■□□□□ 0.46
COL13A1-214ENST00000522165 PKD1L1Q8TDX9 2849 aa17.93■□□□□ 0.46
COL13A1-214ENST00000522165 MAST4O15021 2626 aa17.93■□□□□ 0.46
COL13A1-214ENST00000522165 TEX48A0A1B0GUV7 120 aa17.92■□□□□ 0.46
COL13A1-214ENST00000522165 Q9H8V8 135 aa17.92■□□□□ 0.46
COL13A1-214ENST00000522165 RETNQ9HD89 108 aa17.92■□□□□ 0.46
COL13A1-214ENST00000522165 HTN3P15516 51 aa17.91■□□□□ 0.46
COL13A1-214ENST00000522165 TSPAN13O95857 204 aa17.91■□□□□ 0.46
COL13A1-214ENST00000522165 MIAQ16674 131 aa17.91■□□□□ 0.46
COL13A1-214ENST00000522165 G3V4G9 280 aa17.89■□□□□ 0.45
COL13A1-214ENST00000522165 IGHV3OR16-9A0A0B4J2B5 98 aa17.89■□□□□ 0.45
COL13A1-214ENST00000522165 LINC00959A0A1B0GUT2 108 aa17.89■□□□□ 0.45
COL13A1-214ENST00000522165 PRSS2P07478 247 aa17.89■□□□□ 0.45
COL13A1-214ENST00000522165 EIF4EBP3O60516 100 aaPredicted RBP17.88■□□□□ 0.45
COL13A1-214ENST00000522165 MRPL23Q16540 153 aaKnown RBP17.88■□□□□ 0.45
COL13A1-214ENST00000522165 ZNF625Q96I27 306 aaPredicted RBP17.88■□□□□ 0.45
COL13A1-214ENST00000522165 PRO1854Q9UHT4 67 aa17.87■□□□□ 0.45
COL13A1-214ENST00000522165 DNAH3Q8TD57 4116 aa17.87■□□□□ 0.45
COL13A1-214ENST00000522165 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.86■□□□□ 0.45
COL13A1-214ENST00000522165 A0A0B4J2C4 111 aa17.86■□□□□ 0.45
COL13A1-214ENST00000522165 CIRBPQ14011 172 aaKnown RBP17.85■□□□□ 0.45
COL13A1-214ENST00000522165 ICOSQ9Y6W8 199 aa17.85■□□□□ 0.45
COL13A1-214ENST00000522165 A0A087WZ39 114 aa17.84■□□□□ 0.45
COL13A1-214ENST00000522165 SH2D6Q7Z4S9 175 aa17.84■□□□□ 0.45
COL13A1-214ENST00000522165 IFITM1P13164 125 aa17.83■□□□□ 0.44
COL13A1-214ENST00000522165 COX7B2Q8TF08 81 aa17.83■□□□□ 0.44
COL13A1-214ENST00000522165 HERV-K104P63124 156 aa17.82■□□□□ 0.44
COL13A1-214ENST00000522165 COL6A5A8TX70 2615 aa17.82■□□□□ 0.44
COL13A1-214ENST00000522165 SS18Q15532 418 aa17.81■□□□□ 0.44
COL13A1-214ENST00000522165 DAND5Q8N907 189 aa17.81■□□□□ 0.44
COL13A1-214ENST00000522165 ANK2Q01484 3957 aa17.81■□□□□ 0.44
COL13A1-214ENST00000522165 NPC2P61916 151 aa17.81■□□□□ 0.44
COL13A1-214ENST00000522165 C11orf68Q9H3H3 251 aaKnown RBP17.81■□□□□ 0.44
COL13A1-214ENST00000522165 IGHV3-33P01772 117 aa17.8■□□□□ 0.44
COL13A1-214ENST00000522165 C5orf38Q86SI9 138 aa17.8■□□□□ 0.44
COL13A1-214ENST00000522165 LELP1Q5T871 98 aa17.79■□□□□ 0.44
COL13A1-214ENST00000522165 SFTA2Q6UW10 78 aa17.79■□□□□ 0.44
COL13A1-214ENST00000522165 CLPSL2Q6UWE3 100 aa17.79■□□□□ 0.44
COL13A1-214ENST00000522165 LOC107984156A0A0G2JMH3 177 aa17.78■□□□□ 0.44
COL13A1-214ENST00000522165 ARL17AQ8IVW1 177 aa17.78■□□□□ 0.44
COL13A1-214ENST00000522165 H3BMG7 143 aa17.78■□□□□ 0.44
COL13A1-214ENST00000522165 LINC00269Q8N2A0 174 aa17.78■□□□□ 0.44
COL13A1-214ENST00000522165 Q8N3U1 123 aa17.78■□□□□ 0.44
COL13A1-214ENST00000522165 XCL1P47992 114 aa17.77■□□□□ 0.44
COL13A1-214ENST00000522165 MEIG1Q5JSS6 88 aa17.77■□□□□ 0.44
COL13A1-214ENST00000522165 TOMM7Q9P0U1 55 aa17.77■□□□□ 0.44
COL13A1-214ENST00000522165 ERG28Q9UKR5 140 aa17.76■□□□□ 0.43
COL13A1-214ENST00000522165 A0A0U1RRA0 63 aa17.75■□□□□ 0.43
COL13A1-214ENST00000522165 LINC00308Q8TCZ7 52 aa17.75■□□□□ 0.43
COL13A1-214ENST00000522165 LYRM7Q5U5X0 104 aa17.75■□□□□ 0.43
COL13A1-214ENST00000522165 ANGP03950 147 aaKnown RBP17.74■□□□□ 0.43
COL13A1-214ENST00000522165 H3BNG1 76 aa17.73■□□□□ 0.43
COL13A1-214ENST00000522165 Q6ZTC4 211 aa17.73■□□□□ 0.43
COL13A1-214ENST00000522165 H7C2G1 150 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 REG3AQ06141 175 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 A0A0J9YWU9 116 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 OCIAD2Q56VL3 154 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 LYPD5Q6UWN5 251 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 LINC01561Q8N1V8 128 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 COPS9Q8WXC6 57 aa17.71■□□□□ 0.43
COL13A1-214ENST00000522165 F8W1H4 67 aa17.7■□□□□ 0.42
COL13A1-214ENST00000522165 PSMB2P49721 201 aa17.7■□□□□ 0.42
COL13A1-214ENST00000522165 SOSTDC1Q6X4U4 206 aa17.7■□□□□ 0.42
COL13A1-214ENST00000522165 CD164L2Q6UWJ8 174 aa17.69■□□□□ 0.42
COL13A1-214ENST00000522165 KPRPQ5T749 579 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-214ENST00000522165 CHCHD10Q8WYQ3 142 aaPredicted RBP17.68■□□□□ 0.42
COL13A1-214ENST00000522165 Q1RN00 199 aa17.68■□□□□ 0.42
COL13A1-214ENST00000522165 PRO0461Q9UI25 63 aa17.68■□□□□ 0.42
COL13A1-214ENST00000522165 SCGB1C2P0DMR2 95 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 RNF151Q2KHN1 245 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 NOTCH1P46531 2555 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 TENM3Q9P273 2699 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 TRBV20-1A0A075B6N2 111 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 TCL1BO95988 128 aa17.67■□□□□ 0.42
COL13A1-214ENST00000522165 PPDPFQ9H3Y8 114 aa17.66■□□□□ 0.42
COL13A1-214ENST00000522165 IGLV10-54A0A075B6I4 117 aa17.65■□□□□ 0.42
COL13A1-214ENST00000522165 PRB2P02812 416 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms