RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 A0A1B0GWB2 263 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 NHLRC4P0CG21 123 aaPredicted RBP7.06□□□□□ -1.28
SNF8-214ENST00000515174 COX6A2Q02221 97 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 GAGE6Q13070 117 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 LELP1Q5T871 98 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 ZFAND6Q6FIF0 208 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 Q6ZVH6 145 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 TM2D3Q9BRN9 247 aa7.06□□□□□ -1.28
SNF8-214ENST00000515174 IGLV4-60A0A075B6I1 120 aa7.05□□□□□ -1.28
SNF8-214ENST00000515174 TIMM17BO60830 172 aa7.05□□□□□ -1.28
SNF8-214ENST00000515174 SCGB1D4Q6XE38 83 aa7.05□□□□□ -1.28
SNF8-214ENST00000515174 HIST1H4GQ99525 98 aa7.05□□□□□ -1.28
SNF8-214ENST00000515174 SPATA25Q9BR10 227 aa7.05□□□□□ -1.28
SNF8-214ENST00000515174 A0A096LPF7 62 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 TRAV13-1A0A0B4J241 112 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 IGHV3OR16-9A0A0B4J2B5 98 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 SMIM13P0DJ93 91 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 GCSHP23434 173 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 FXYD2P54710 66 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 RBX1P62877 108 aa7.04□□□□□ -1.28
SNF8-214ENST00000515174 COL7A1Q02388 2944 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 A0A0J9YXY3 114 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 A6NJY4 79 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 SMIM1B2RUZ4 78 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 NDUFA1O15239 70 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 SRSF9Q13242 221 aaKnown RBP eCLIP7.03□□□□□ -1.28
SNF8-214ENST00000515174 C10orf126Q8N4M7 172 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 PPDPFQ9H3Y8 114 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 NDUFA12Q9UI09 145 aa7.03□□□□□ -1.28
SNF8-214ENST00000515174 A0A087WZ39 114 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 LINC00959A0A1B0GUT2 108 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 C9orf118A6NHY6 69 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 TMEM238C9JI98 176 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 SPINK8P0C7L1 97 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 PTTG1IPP53801 180 aa7.02□□□□□ -1.29
SNF8-214ENST00000515174 TMEM262E9PQX1 116 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 HERV-K104P63124 156 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 SS18Q15532 418 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 SFTA2Q6UW10 78 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 LYPD5Q6UWN5 251 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 C11orf45Q8TAV5 145 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 MUC7Q8TAX7 377 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
SNF8-214ENST00000515174 TENM2Q9NT68 2774 aa7□□□□□ -1.29
SNF8-214ENST00000515174 BIRC6Q9NR09 4857 aa7□□□□□ -1.29
SNF8-214ENST00000515174 A0A0J9YWU9 116 aa7□□□□□ -1.29
SNF8-214ENST00000515174 IFITM1P13164 125 aa7□□□□□ -1.29
SNF8-214ENST00000515174 CASC10Q5T4H9 136 aa7□□□□□ -1.29
SNF8-214ENST00000515174 Q6ZTC4 211 aa7□□□□□ -1.29
SNF8-214ENST00000515174 LITAFQ99732 161 aa7□□□□□ -1.29
SNF8-214ENST00000515174 IGHV3-64A0A075B6Q5 118 aa6.99□□□□□ -1.29
SNF8-214ENST00000515174 HTN3P15516 51 aa6.99□□□□□ -1.29
SNF8-214ENST00000515174 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
SNF8-214ENST00000515174 ZNF625Q96I27 306 aaPredicted RBP6.99□□□□□ -1.29
SNF8-214ENST00000515174 PRR34Q9NV39 138 aa6.99□□□□□ -1.29
SNF8-214ENST00000515174 K7EP13 123 aa6.98□□□□□ -1.29
SNF8-214ENST00000515174 RPL24P83731 157 aaKnown RBP6.98□□□□□ -1.29
SNF8-214ENST00000515174 UBE2V1Q13404 147 aa6.98□□□□□ -1.29
SNF8-214ENST00000515174 CD164L2Q6UWJ8 174 aa6.98□□□□□ -1.29
SNF8-214ENST00000515174 NHP2Q9NX24 153 aaKnown RBP6.98□□□□□ -1.29
SNF8-214ENST00000515174 STAB2Q8WWQ8 2551 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 TRAV10A0A0B4J240 114 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 LCE6AA0A183 80 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 C15orf53Q8NAA6 179 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 COPS9Q8WXC6 57 aa6.97□□□□□ -1.29
SNF8-214ENST00000515174 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.96□□□□□ -1.3
SNF8-214ENST00000515174 TRAV8-4A0A0B4J246 113 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 NANOS2P60321 138 aaKnown RBP6.96□□□□□ -1.3
SNF8-214ENST00000515174 REG3AQ06141 175 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 MIAQ16674 131 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 LINC00269Q8N2A0 174 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 COX7B2Q8TF08 81 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 Q9H8V8 135 aa6.96□□□□□ -1.3
SNF8-214ENST00000515174 EPPK1P58107 5090 aaKnown RBP6.96□□□□□ -1.3
SNF8-214ENST00000515174 A0A0B4J2C4 111 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 A0A1W2PPM0 123 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 IGLL5B9A064 214 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 ANGP03950 147 aaKnown RBP6.95□□□□□ -1.3
SNF8-214ENST00000515174 CFC1BP0CG36 223 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 CFC1P0CG37 223 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 VAMP3Q15836 100 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 MUSTN1Q8IVN3 82 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 Q8IZM0 81 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 RYR2Q92736 4967 aa6.95□□□□□ -1.3
SNF8-214ENST00000515174 A4D1N5 150 aa6.94□□□□□ -1.3
SNF8-214ENST00000515174 H3BUT2 72 aa6.94□□□□□ -1.3
SNF8-214ENST00000515174 ADAMTSL4-AS1Q5T5F5 129 aa6.94□□□□□ -1.3
SNF8-214ENST00000515174 CHCHD10Q8WYQ3 142 aaPredicted RBP6.94□□□□□ -1.3
SNF8-214ENST00000515174 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
SNF8-214ENST00000515174 IGKV3OR2-268A0A0C4DH90 116 aa6.93□□□□□ -1.3
SNF8-214ENST00000515174 IBA57-AS1B1ANH7 110 aa6.93□□□□□ -1.3
SNF8-214ENST00000515174 COX7A2LO14548 114 aa6.93□□□□□ -1.3
SNF8-214ENST00000515174 FABP2P12104 132 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms