RNA–Protein interactions for RNA: ENST00000514822.1

PHF3-211, Transcript of PHD finger protein 3, humanhuman

TSL 4

Gene PHF3, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-211ENST00000514822 KMT2AQ03164 3969 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 USP34Q70CQ2 3546 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 ZNF609O15014 1411 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 PARP14Q460N5 1801 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 UNC13BO14795 1591 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 SETBP1Q9Y6X0 1596 aa0.36□□□□□ -2.35
PHF3-211ENST00000514822 HTTP42858 3142 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 CACNA1HO95180 2353 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 TPRP12270 2363 aaKnown RBP0.35□□□□□ -2.35
PHF3-211ENST00000514822 DMXL2Q8TDJ6 3036 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 LAMA1P25391 3075 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 CEP250Q9BV73 2442 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 CTXND1A0A1B0GTU2 59 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 F6UZH7 168 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 PPP3R1P63098 170 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 C9orf153Q5TBE3 101 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 BAGE2Q86Y30 109 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 UQCR10Q9UDW1 63 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 SPCS1Q9Y6A9 102 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 MTORP42345 2549 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 PCNX1Q96RV3 2341 aa0.35□□□□□ -2.35
PHF3-211ENST00000514822 CHD9Q3L8U1 2897 aa0.34□□□□□ -2.35
PHF3-211ENST00000514822 LOC100130705A0A1B0GUX0 176 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 A0A1B0GV90 55 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 F8VRH5 84 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 CPSF1Q10570 1443 aaKnown RBP0.34□□□□□ -2.36
PHF3-211ENST00000514822 MUC12Q9UKN1 5478 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 A2ML1A8K2U0 1454 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 SHANK2Q9UPX8 1470 aa0.34□□□□□ -2.36
PHF3-211ENST00000514822 PTPRZ1P23471 2315 aaPredicted RBP0.33□□□□□ -2.36
PHF3-211ENST00000514822 NBPF19A0A087WUL8 3843 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 ZNF815PA8K554 130 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 IFITM1P13164 125 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 KRTDAPP60985 99 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 GTF2H5Q6ZYL4 71 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 MBD5Q9P267 1494 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 MAPKBP1O60336 1514 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 ZMYM4Q5VZL5 1548 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 TNS1Q9HBL0 1735 aaKnown RBP0.33□□□□□ -2.36
PHF3-211ENST00000514822 AHCTF1Q8WYP5 2266 aa0.33□□□□□ -2.36
PHF3-211ENST00000514822 MAP1AP78559 2803 aaPredicted RBP0.32□□□□□ -2.36
PHF3-211ENST00000514822 MUC22E2RYF6 1773 aaPredicted RBP0.32□□□□□ -2.36
PHF3-211ENST00000514822 OOSP1A8MZH6 123 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 G3V318 75 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 S100A1P23297 94 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 SSBP3-AS1Q7Z2R9 100 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 DPH3P1Q9H4G8 78 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 FAIMQ9NVQ4 179 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 LINC01558Q9Y6Z2 57 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 NWD2Q9ULI1 1742 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 FREM2Q5SZK8 3169 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 DMXL1Q9Y485 3027 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
PHF3-211ENST00000514822 SPEF2Q9C093 1822 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 MYH7P12883 1935 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 C20orf202A1L168 122 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 NAP1L6A6NFF2 107 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 MGPP08493 103 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 COX6CP09669 75 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 S100PP25815 95 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 FAM167A-AS1Q96KT0 104 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 TCEAL7Q9BRU2 100 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 FAM135AQ9P2D6 1515 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 EIF4G3O43432 1585 aaKnown RBP0.31□□□□□ -2.36
PHF3-211ENST00000514822 F8P00451 2351 aa0.31□□□□□ -2.36
PHF3-211ENST00000514822 SRRM2Q9UQ35 2752 aaKnown RBP0.3□□□□□ -2.36
PHF3-211ENST00000514822 MRC1P22897 1456 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 MYOM2P54296 1465 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 GOLGA3Q08378 1498 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 UTRNP46939 3433 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 ANK2Q01484 3957 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 IGLC7A0M8Q6 106 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 HMGN4O00479 90 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 SFT2D2O95562 160 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 GNG11P61952 73 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 HAMPP81172 84 aa0.3□□□□□ -2.36
PHF3-211ENST00000514822 CNOT1A5YKK6 2376 aaKnown RBP0.3□□□□□ -2.36
PHF3-211ENST00000514822 SVEP1Q4LDE5 3571 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 CACNA1CQ13936 2221 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 ASXL3Q9C0F0 2248 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 LAMA5O15230 3695 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 CHKB-CPT1BH3BT56 60 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 TMEM263Q8WUH6 116 aaKnown RBP0.29□□□□□ -2.36
PHF3-211ENST00000514822 NXT2Q9NPJ8 142 aaKnown RBP0.29□□□□□ -2.36
PHF3-211ENST00000514822 U3KQA8 63 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 FAM186AA6NE01 2351 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 SPTBN2O15020 2390 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 SIPA1L3O60292 1781 aaPredicted RBP0.29□□□□□ -2.36
PHF3-211ENST00000514822 C10orf71Q711Q0 1435 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 MED14O60244 1454 aa0.29□□□□□ -2.36
PHF3-211ENST00000514822 LOC400499M0QZD8 3231 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 HRNRQ86YZ3 2850 aaPredicted RBP0.28□□□□□ -2.36
PHF3-211ENST00000514822 NALCNQ8IZF0 1738 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 GOLGA4Q13439 2230 aaKnown RBP0.28□□□□□ -2.36
PHF3-211ENST00000514822 TRAV22A0A0B4J277 110 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 TMEM262E9PQX1 116 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 PIGYQ3MUY2 71 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 PRO0255Q9UI72 69 aa0.28□□□□□ -2.36
PHF3-211ENST00000514822 FRYLO94915 3013 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms