RNA–Protein interactions for RNA: ENST00000514428.1

RERE-218, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 3

Gene RERE, Length 273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-218ENST00000514428 COPZ2Q9P299 210 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 MYOM3Q5VTT5 1437 aa-0.58□□□□□ -2.5
RERE-218ENST00000514428 LRRK2Q5S007 2527 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 GAPVD1Q14C86 1478 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 UTP20O75691 2785 aaKnown RBP-0.59□□□□□ -2.5
RERE-218ENST00000514428 TRAV13-2A0A0B4J235 113 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 MT1AP04731 61 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 COPZ1P61923 177 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 DEFB112Q30KQ8 113 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 Q8N8P6 123 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 SMIM4Q8WVI0 70 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 TPT1P8Q9HAU6 139 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 LENEPQ9Y5L5 61 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 A0A0C4DFX4 3053 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 SBF2Q86WG5 1849 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 FRYQ5TBA9 3013 aa-0.59□□□□□ -2.5
RERE-218ENST00000514428 RYR2Q92736 4967 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 CEP290O15078 2479 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 NSD3Q9BZ95 1437 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 LOC105371267A0A1B0GV96 52 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 IFNGP01579 166 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 C10orf128Q5T292 105 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 LZICQ8WZA0 190 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 TCEAL4Q96EI5 215 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 FAM186AA6NE01 2351 aa-0.6□□□□□ -2.51
RERE-218ENST00000514428 RNF213Q63HN8 5207 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 DOCK1Q14185 1865 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 DNAH11Q96DT5 4516 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 CTXND1A0A1B0GTU2 59 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 COX8AP10176 69 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 HIST1H1DP16402 221 aaKnown RBP-0.61□□□□□ -2.51
RERE-218ENST00000514428 COX17Q14061 63 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 SMCO1Q147U7 214 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 LSM10Q969L4 123 aaKnown RBP-0.61□□□□□ -2.51
RERE-218ENST00000514428 CCDC167Q9P0B6 97 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 MTORP42345 2549 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 CCDC168Q8NDH2 2452 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 GRIN2AQ12879 1464 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 PATJQ8NI35 1801 aa-0.61□□□□□ -2.51
RERE-218ENST00000514428 GCN1Q92616 2671 aaKnown RBP-0.61□□□□□ -2.51
RERE-218ENST00000514428 KIAA0556O60303 1618 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 C9orf62Q8N4C0 152 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 V9GYH0 126 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 ARAP2Q8WZ64 1704 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 COL4A6Q14031 1691 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 ITPR1Q14643 2758 aa-0.62□□□□□ -2.51
RERE-218ENST00000514428 PPIP5K1Q6PFW1 1433 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 PTPN23Q9H3S7 1636 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 DNAH1Q9P2D7 4330 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 SPEF2Q9C093 1822 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 NBEAL2Q6ZNJ1 2754 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 ZFHX3Q15911 3703 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 H0YGG7 62 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 SYS1-DBNDD2H3BUS1 97 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 TMEM170BQ5T4T1 132 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 Q6AWC8 147 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 Q6JHZ5 121 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 TTC9CQ8N5M4 171 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 USMG5Q96IX5 58 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 AQP10Q96PS8 301 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 NDUFA4L2Q9NRX3 87 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 POLA1P09884 1462 aaPredicted RBP-0.63□□□□□ -2.51
RERE-218ENST00000514428 CFTRP13569 1480 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 ADAMTS12P58397 1594 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 CEP295Q9C0D2 2601 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 KIF21AQ7Z4S6 1674 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 CMYA5Q8N3K9 4069 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 PAPPA2Q9BXP8 1791 aa-0.63□□□□□ -2.51
RERE-218ENST00000514428 PLECQ15149 4684 aaKnown RBP-0.63□□□□□ -2.51
RERE-218ENST00000514428 TULP4Q9NRJ4 1543 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 DOCK2Q92608 1830 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 PDE4DIPQ5VU43 2346 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 RIMS1Q86UR5 1692 aaKnown RBP-0.64□□□□□ -2.51
RERE-218ENST00000514428 SETBP1Q9Y6X0 1596 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 SHANK2Q9UPX8 1470 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 TRBV7-4A0A0J9YYF1 115 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 C12orf73Q69YU5 71 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 PDCD10Q9BUL8 212 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 RAPGEF6Q8TEU7 1601 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 ARHGEF12Q9NZN5 1544 aa-0.64□□□□□ -2.51
RERE-218ENST00000514428 CCDC141Q6ZP82 1450 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 DNAH7Q8WXX0 4024 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 F8VRH5 84 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 UQCR11O14957 56 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 SSSCA1O60232 199 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 APOC3P02656 99 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 TPPP2P59282 170 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 BAGE2Q86Y30 109 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 SNRNP25Q9BV90 132 aaKnown RBP-0.65□□□□□ -2.51
RERE-218ENST00000514428 RERGLQ9H628 205 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 NAA60Q9H7X0 242 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 APLNQ9ULZ1 77 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 SERP1Q9Y6X1 66 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 LINC01558Q9Y6Z2 57 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 FMN2Q9NZ56 1722 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 C5orf42Q9H799 3197 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 SLIT1O75093 1534 aa-0.65□□□□□ -2.51
RERE-218ENST00000514428 APOBP04114 4563 aaKnown RBP-0.65□□□□□ -2.51
RERE-218ENST00000514428 COL12A1Q99715 3063 aa-0.66□□□□□ -2.51
RERE-218ENST00000514428 TRIOO75962 3097 aa-0.66□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms