RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SMIM15Q7Z3B0 74 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 DAZ4Q86SG3 579 aaKnown RBP2.34□□□□□ -2.03
HTT-210ENST00000512909 C10orf126Q8N4M7 172 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 MIR7-3HGQ8N6C7 128 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 SFRP2Q96HF1 295 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 TCEAL7Q9BRU2 100 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 UPK3BQ9BT76 320 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 DERL1Q9BUN8 251 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 BIN3Q9NQY0 253 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 IL36BQ9NZH7 164 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 VAX2Q9UIW0 290 aa2.34□□□□□ -2.03
HTT-210ENST00000512909 TRBV7-3A0A075B6L6 115 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 A0A087WTM6 91 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 A0A087WWC5 75 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 TRAV8-3A0A0A6YYJ7 113 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 IGKV2-24A0A0C4DH68 120 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 TRBV6-1A0A0K0K1D8 114 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 GATCO43716 136 aaKnown RBP2.33□□□□□ -2.04
HTT-210ENST00000512909 SMR3BP02814 79 aaPredicted RBP2.33□□□□□ -2.04
HTT-210ENST00000512909 ANGP03950 147 aaKnown RBP2.33□□□□□ -2.04
HTT-210ENST00000512909 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 RAB4BP61018 213 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 MEF2BQ02080 365 aaPredicted RBP2.33□□□□□ -2.04
HTT-210ENST00000512909 ELOBQ15370 118 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 LYZL1Q6UWQ5 148 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 TCTE3Q8IZS6 198 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 SPANXA2-OT1Q8N9U9 137 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 FER1L6-AS1Q8NA97 138 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 OR10AG1Q8NH19 301 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 BAALCQ8WXS3 180 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 PTH2Q96A98 100 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 UBE2WQ96B02 151 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 BORCS7Q96B45 105 aa2.33□□□□□ -2.04
HTT-210ENST00000512909 TRAV1-1A0A0B4J248 108 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 IGKV3OR2-268A0A0C4DH90 116 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 A0A1B0GVG6 124 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 ZNF727A8MUV8 499 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 IBA57-AS1B1ANH7 110 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 C9JQL5 133 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 F2Z2F3 143 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 K7EP13 123 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 UBE2L6O14933 153 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 CRPP02741 224 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 TRGC1P0CF51 173 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 BCL2P10415 239 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 NTF3P20783 257 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 RBX1P62877 108 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 LINC01556Q5JQF7 62 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 ORAOV1Q8WV07 137 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
HTT-210ENST00000512909 STAB2Q8WWQ8 2551 aa2.32□□□□□ -2.04
HTT-210ENST00000512909 KRTAP10-8P60410 259 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 UBE2D3P61077 147 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 UBE2D2P62837 147 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 HAMPP81172 84 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 PEA15Q15121 130 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 TMEM97Q5BJF2 176 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 AMMECR1LQ6DCA0 310 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 RASL11AQ6T310 242 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 CLPSL2Q6UWE3 100 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 NIT1Q86X76 327 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 C9orf62Q8N4C0 152 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 DNAJC30Q96LL9 226 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 AP1S3Q96PC3 154 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 SMIM7Q9BQ49 75 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 DPH3P1Q9H4G8 78 aa2.31□□□□□ -2.04
HTT-210ENST00000512909 IGLV10-54A0A075B6I4 117 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 TRBV25-1A0A075B6N4 114 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 TRBV6-8A0A0A6YYG3 113 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 TRAV26-2A0A0B4J265 109 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 IGHV1-24A0A0C4DH33 117 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 TRBV10-1A0A0K0K1A3 114 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 C19orf71A6NCJ1 209 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 A8MUU9 505 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 NDUFS5O43920 106 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 IGLV2-8P01709 118 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 OR5AL1P0C617 328 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 INAFM2P0DMQ5 153 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 FOXA3P55318 350 aaPredicted RBP2.3□□□□□ -2.04
HTT-210ENST00000512909 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 RAB14P61106 215 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 Q0VG73 95 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 COTL1Q14019 142 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 PMVKQ15126 192 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 ADIRFQ15847 76 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 TMEM241Q24JQ0 296 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 Q6ZRN7 208 aaPredicted RBP2.3□□□□□ -2.04
HTT-210ENST00000512909 LINC00269Q8N2A0 174 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 Q8N814 137 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 NIT2Q9NQR4 276 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 V9GYY9 64 aa2.3□□□□□ -2.04
HTT-210ENST00000512909 FAM240AA0A1B0GVK7 77 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 K7EN84 100 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 M0QY20 66 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 SRP19P09132 144 aaKnown RBP2.29□□□□□ -2.04
HTT-210ENST00000512909 CXCL1P09341 107 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 IGLC6P0CF74 106 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 FCER1GP30273 86 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 PKIAP61925 76 aa2.29□□□□□ -2.04
HTT-210ENST00000512909 KRTAP13-2Q52LG2 175 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms