RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 GOLGA4Q13439 2230 aaKnown RBP1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPAG17Q6Q759 2223 aa1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 SMG1Q96Q15 3661 aaKnown RBP1.51□□□□□ -2.17
HMGB1P47-201ENST00000511281 ASXL3Q9C0F0 2248 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 FXYD6-FXYD2A0A087WZ82 144 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 TRAV17A0A0B4J275 112 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 IGHV1-24A0A0C4DH33 117 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 SFT2D2O95562 160 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 MPC2O95563 127 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 EVI2AP22794 236 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 SNRPD3P62318 126 aaKnown RBP1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 ARHGAP5-AS1Q96IT6 56 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 S100A13Q99584 98 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 FXYD6Q9H0Q3 95 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 NOP16Q9Y3C1 178 aaKnown RBP1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 NCOR2Q9Y618 2525 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 ZNF292O60281 2723 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 ANKRD36A6QL64 1941 aa1.5□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPTBN2O15020 2390 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPENQ96T58 3664 aaKnown RBP1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 USP24Q9UPU5 2620 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 TRAV23DV6A0A075B6W5 121 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 MCRIP1C9JLW8 97 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 SIX6O95475 246 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 CFDP00746 253 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 NMBP08949 121 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 RBP2P50120 134 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 ARPC4P59998 168 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 UBA52P62987 128 aaKnown RBP1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 HIST1H1AQ02539 215 aaPredicted RBP1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 SMCO1Q147U7 214 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 DEFB109BQ30KR1 87 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 PIGYQ3MUY2 71 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 OCIAD2Q56VL3 154 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 CLLU1Q5K131 121 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 SLC25A26Q70HW3 274 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 C6orf201Q7Z4U5 140 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 KCNRGQ8N5I3 272 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 FDCSPQ8NFU4 85 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 PPP1R1CQ8WVI7 109 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 PDCD10Q9BUL8 212 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 KNTC1P50748 2209 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 CEP250Q9BV73 2442 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 DMXL2Q8TDJ6 3036 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 BSNQ9UPA5 3926 aa1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 CNOT1A5YKK6 2376 aaKnown RBP1.49□□□□□ -2.17
HMGB1P47-201ENST00000511281 AKAP13Q12802 2813 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 ZZEF1O43149 2961 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 APC2O95996 2303 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 KANTRA0A1W2PQU2 76 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 CRYM-AS1A6NIL9 109 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 S100A12P80511 92 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 OR2T2Q6IF00 324 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 CSAG1Q6PB30 78 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 AQP10Q96PS8 301 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 NMES1Q9C002 83 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 SLC35B3Q9H1N7 401 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 NAA60Q9H7X0 242 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 CEP295Q9C0D2 2601 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 PI4KAP42356 2102 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPTBN4Q9H254 2564 aa1.48□□□□□ -2.17
HMGB1P47-201ENST00000511281 URB1O60287 2271 aaKnown RBP1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 PIGBOS1A0A0B4J2F0 54 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 TMEM30CPA0ZSE6 113 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 IQCF6A8MYZ5 107 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 FXYD4P59646 89 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 S100A10P60903 97 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 HMGN3Q15651 99 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 SMIM21Q3B7S5 101 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 ALKAL2Q6UX46 152 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 Q6ZS92 163 aa1.47□□□□□ -2.17
HMGB1P47-201ENST00000511281 SPTBP11277 2137 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 RELNP78509 3460 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 NBEAQ8NFP9 2946 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 NUPR2A6NF83 97 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 PITX3O75364 302 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 SLC25A6P12236 298 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 RHOHQ15669 191 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 NMSQ5H8A3 153 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 ZNF818PQ6ZRF7 136 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 Q8N6K4 173 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 ARL11Q969Q4 196 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 SMIM3Q9BZL3 60 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 TENM1Q9UKZ4 2725 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 WDR87Q6ZQQ6 2873 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 ACACBO00763 2458 aa1.46□□□□□ -2.18
HMGB1P47-201ENST00000511281 TLN1Q9Y490 2541 aaKnown RBP1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 IGF2RP11717 2491 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 TMEM218A2RU14 115 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 FAM24AA6NFZ4 105 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 ATP6V1G2-DDX39BF2Z307 99 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 SSSCA1O60232 199 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 YPEL1O60688 119 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 TFF1P04155 84 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 ADCYAP1P18509 176 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 RPL7L1Q6DKI1 246 aaKnown RBP1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 LSM10Q969L4 123 aaKnown RBP1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 COA4Q9NYJ1 87 aa1.45□□□□□ -2.18
HMGB1P47-201ENST00000511281 CACNA1CQ13936 2221 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms