RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 COX7A2LO14548 114 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 FOXI1Q12951 378 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 SCGB3A1Q96QR1 104 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 PKIGQ9Y2B9 76 aa6.01□□□□□ -1.45
NUP54-207ENST00000508583 IGIPA6NJ69 53 aa6□□□□□ -1.45
NUP54-207ENST00000508583 HBDP02042 147 aa6□□□□□ -1.45
NUP54-207ENST00000508583 S100A1P23297 94 aa6□□□□□ -1.45
NUP54-207ENST00000508583 FUSP35637 526 aaKnown RBP eCLIP6□□□□□ -1.45
NUP54-207ENST00000508583 WFDC2Q14508 124 aa6□□□□□ -1.45
NUP54-207ENST00000508583 RNASE13Q5GAN3 156 aaKnown RBP6□□□□□ -1.45
NUP54-207ENST00000508583 CHCHD1Q96BP2 118 aaKnown RBP6□□□□□ -1.45
NUP54-207ENST00000508583 GVQW2A0A096LPI5 108 aaPredicted RBP5.99□□□□□ -1.45
NUP54-207ENST00000508583 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
NUP54-207ENST00000508583 ZNF561-AS1K7EIQ3 104 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 CDK2AP2O75956 126 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 ATP5LO75964 103 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 TRGC2P03986 189 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 PRSS1P07477 247 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 CNBPP62633 177 aaKnown RBP5.99□□□□□ -1.45
NUP54-207ENST00000508583 BAGE3Q86Y29 109 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 AMELXQ99217 191 aa5.99□□□□□ -1.45
NUP54-207ENST00000508583 COLCA2A8K830 154 aa5.98□□□□□ -1.45
NUP54-207ENST00000508583 OPRPNQ99935 248 aaPredicted RBP5.98□□□□□ -1.45
NUP54-207ENST00000508583 GEMIN7Q9H840 131 aaKnown RBP5.98□□□□□ -1.45
NUP54-207ENST00000508583 F8WDY8 70 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 HSBP1O75506 76 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 UBE2D1P51668 147 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 HERVK_113P63121 156 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 C15orf56Q8N910 161 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 OR10D4PQ8NGN7 298 aa5.97□□□□□ -1.45
NUP54-207ENST00000508583 IGHV3OR16-9A0A0B4J2B5 98 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 PMVKQ15126 192 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 HIGD2BQ4VC39 106 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 LINC00242Q5T6M2 205 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 LCE1DQ5T752 114 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 LINC01561Q8N1V8 128 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 C9orf163Q8N9P6 203 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 FAM104AQ969W3 186 aa5.96□□□□□ -1.46
NUP54-207ENST00000508583 DYNC1H1Q14204 4646 aaKnown RBP5.95□□□□□ -1.46
NUP54-207ENST00000508583 IGHV3-64A0A075B6Q5 118 aa5.95□□□□□ -1.46
NUP54-207ENST00000508583 A0A087WZ39 114 aa5.95□□□□□ -1.46
NUP54-207ENST00000508583 LINC00173Q6ZV60 143 aa5.95□□□□□ -1.46
NUP54-207ENST00000508583 FAM19A3Q7Z5A8 133 aa5.95□□□□□ -1.46
NUP54-207ENST00000508583 C5orf38Q86SI9 138 aa5.95□□□□□ -1.46
NUP54-207ENST00000508583 PACRGQ96M98 296 aaPredicted RBP5.95□□□□□ -1.46
NUP54-207ENST00000508583 TINCRA0A1B0GVN0 87 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 H3BRM9 83 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 ATP6V1G1O75348 118 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 SCO1O75880 301 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 KRTAP10-1P60331 282 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 SPAG11BQ08648 103 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 ORAOV1Q8WV07 137 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 URB1-AS1Q96HZ7 61 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 C2orf48Q96LS8 159 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 CARD19Q96LW7 228 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 CST9LQ9H4G1 147 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 KIAA1109Q2LD37 5005 aa5.94□□□□□ -1.46
NUP54-207ENST00000508583 IGLV4-69A0A075B6H9 119 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 PRSS2P07478 247 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 NDUFA6P56556 154 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 SYCNQ0VAF6 134 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 PMCHL1Q16048 86 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 PDZD11Q5EBL8 140 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 LINC00469Q8N7U9 141 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 CAMK2N2Q96S95 79 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 LINC00474Q9P2X8 69 aa5.93□□□□□ -1.46
NUP54-207ENST00000508583 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 A0A096LNJ9 63 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 NDUFA1O15239 70 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 SERF1AO75920 110 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 Q6ZSA8 131 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 IFI27L1Q96BM0 104 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 HSPB8Q9UJY1 196 aa5.92□□□□□ -1.46
NUP54-207ENST00000508583 LEPROTL1O95214 131 aa5.91□□□□□ -1.46
NUP54-207ENST00000508583 COX6A2Q02221 97 aa5.91□□□□□ -1.46
NUP54-207ENST00000508583 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
NUP54-207ENST00000508583 LINC00528Q8N1L1 170 aa5.91□□□□□ -1.46
NUP54-207ENST00000508583 IGLV5-45A0A087WSX0 123 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 TRAV12-1A0A0B4J245 112 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BKO60814 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 SLPIP03973 132 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BJP06899 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 IGLC3P0DOY3 106 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BOP23527 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BBP33778 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 CXCL5P42830 114 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BDP58876 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 CKS1BP61024 79 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BCP62807 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST2H2BEQ16778 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 RNF151Q2KHN1 245 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 LINC01620Q4KN68 170 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.9□□□□□ -1.46
NUP54-207ENST00000508583 SDIM1Q6ZPB5 146 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BHQ93079 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BNQ99877 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 HIST1H2BMQ99879 126 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 CHAC1Q9BUX1 264 aa5.9□□□□□ -1.46
NUP54-207ENST00000508583 MRPL35Q9NZE8 188 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms