RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TRAV40A0A0B4J280 105 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 NDUFA11Q86Y39 141 aa2.83□□□□□ -1.96
NIPBL-204ENST00000504430 LINC00315P59091 139 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 LINC00208Q96KT6 92 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 LENEPQ9Y5L5 61 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 EHBP1L1Q8N3D4 1523 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 HIGD1CA8MV81 97 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 F8VRH5 84 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 ADCY10Q96PN6 1610 aa2.82□□□□□ -1.96
NIPBL-204ENST00000504430 SAA2P0DJI9 122 aaPredicted RBP2.81□□□□□ -1.96
NIPBL-204ENST00000504430 AGLP35573 1532 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 COL4A2P08572 1712 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 Q6JHZ5 121 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 CRYBG1Q9Y4K1 1723 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 KRTAP1-4P0C5Y4 121 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 ELOF1P60002 83 aaKnown RBP2.81□□□□□ -1.96
NIPBL-204ENST00000504430 FXYD3Q14802 87 aa2.81□□□□□ -1.96
NIPBL-204ENST00000504430 DLEC1Q9Y238 1755 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 UGGT1Q9NYU2 1555 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 IFI6P09912 130 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 ZNF563Q8TA94 476 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 ABCA6Q8N139 1617 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 CEP170BQ9Y4F5 1589 aaPredicted RBP2.8□□□□□ -1.96
NIPBL-204ENST00000504430 URB2Q14146 1524 aaKnown RBP2.8□□□□□ -1.96
NIPBL-204ENST00000504430 CCL18P55774 89 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 CAV3P56539 151 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 LINC01558Q9Y6Z2 57 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 KIAA0586Q9BVV6 1533 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 SYCP2Q9BX26 1530 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 TRBV6-5A0A0K0K1A5 114 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 K7EMI3 77 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 SPINK7P58062 85 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 FXYD4P59646 89 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 LCE3CQ5T5A8 94 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 SMIM5Q71RC9 77 aa2.8□□□□□ -1.96
NIPBL-204ENST00000504430 ZDBF2Q9HCK1 2354 aa2.79□□□□□ -1.96
NIPBL-204ENST00000504430 IFI27P40305 119 aaPredicted RBP2.79□□□□□ -1.96
NIPBL-204ENST00000504430 CFAP43Q8NDM7 1665 aa2.79□□□□□ -1.96
NIPBL-204ENST00000504430 CACNA1CQ13936 2221 aa2.79□□□□□ -1.96
NIPBL-204ENST00000504430 TIAM1Q13009 1591 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 ASCC3Q8N3C0 2202 aaKnown RBP2.78□□□□□ -1.96
NIPBL-204ENST00000504430 RPL37AP61513 92 aaKnown RBP2.78□□□□□ -1.96
NIPBL-204ENST00000504430 EFCAB6Q5THR3 1501 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 ZNF142P52746 1687 aaPredicted RBP2.78□□□□□ -1.96
NIPBL-204ENST00000504430 LOC285556D6RIA3 1793 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 TRBV7-4A0A0J9YYF1 115 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 SNRPGP15A8MWD9 76 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 ZNF137PP52743 207 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 KRTAP10-9P60411 292 aa2.78□□□□□ -1.96
NIPBL-204ENST00000504430 NHSL1Q5SYE7 1610 aa2.78□□□□□ -1.97
NIPBL-204ENST00000504430 ATP7BP35670 1465 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 COL4A1P02462 1669 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 MYOM1P52179 1685 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 RNF17Q9BXT8 1623 aaKnown RBP2.77□□□□□ -1.97
NIPBL-204ENST00000504430 TRAV1-2A0A0B4J238 106 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 PRH1P02810 166 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 IFT172Q9UG01 1749 aa2.77□□□□□ -1.97
NIPBL-204ENST00000504430 COL5A1P20908 1838 aaPredicted RBP2.77□□□□□ -1.97
NIPBL-204ENST00000504430 MROH2AA6NES4 1674 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 WIZO95785 1651 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 LRP6O75581 1613 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 CTXND1A0A1B0GTU2 59 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 HMGA1P17096 107 aaKnown RBP2.76□□□□□ -1.97
NIPBL-204ENST00000504430 Q96NJ1 140 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 KIF21BO75037 1637 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 KRTAP10-11P60412 298 aa2.76□□□□□ -1.97
NIPBL-204ENST00000504430 Q6ZRN7 208 aaPredicted RBP2.76□□□□□ -1.97
NIPBL-204ENST00000504430 ABCC8Q09428 1581 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 MROH2BQ7Z745 1585 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 PAPPAQ13219 1627 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 TRGV2A0A075B6R0 118 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.75□□□□□ -1.97
NIPBL-204ENST00000504430 J3QRE1 110 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 AMELXQ99217 191 aa2.75□□□□□ -1.97
NIPBL-204ENST00000504430 IGKV2-40A0A087WW87 121 aaPredicted RBP2.74□□□□□ -1.97
NIPBL-204ENST00000504430 H3BRN7 92 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 IGKV2D-40P01614 121 aaPredicted RBP2.74□□□□□ -1.97
NIPBL-204ENST00000504430 FAM74A4Q5TZK3 123 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 NCBP2-AS2Q69YL0 99 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 C5orf56Q8N8D9 126 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 ANAPC11Q9NYG5 84 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 KNTC1P50748 2209 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 CD163L1Q9NR16 1453 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 IGKV4-1P06312 121 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 TRGV1A0A0A0MS02 117 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 V9GYV3 84 aa2.74□□□□□ -1.97
NIPBL-204ENST00000504430 ALKQ9UM73 1620 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 LINC01549A6NIU2 74 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 TSC2P49815 1807 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 R4GMQ9 66 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 MAST1Q9Y2H9 1570 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 ZNF625Q96I27 306 aaPredicted RBP2.73□□□□□ -1.97
NIPBL-204ENST00000504430 WFDC6Q9BQY6 131 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 E9PCH4 1651 aa2.73□□□□□ -1.97
NIPBL-204ENST00000504430 C10orf55Q5SWW7 151 aa2.72□□□□□ -1.97
NIPBL-204ENST00000504430 COL16A1Q07092 1604 aaPredicted RBP2.72□□□□□ -1.97
NIPBL-204ENST00000504430 LINC00472Q9H8W2 130 aa2.72□□□□□ -1.97
NIPBL-204ENST00000504430 GCC2Q8IWJ2 1684 aa2.71□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms