RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.71■□□□□ 0.11
PCDH1-204ENST00000503492 IGHV4-28A0A0C4DH34 117 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 WIPF1O43516 503 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 TIMM17BO60830 172 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 IGHV3-33P01772 117 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 RNF151Q2KHN1 245 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 Q9H8V8 135 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 K7ERU9 68 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 WFDC2Q14508 124 aa15.71■□□□□ 0.11
PCDH1-204ENST00000503492 PRO0461Q9UI25 63 aa15.7■□□□□ 0.1
PCDH1-204ENST00000503492 NBEAL2Q6ZNJ1 2754 aa15.7■□□□□ 0.1
PCDH1-204ENST00000503492 MTURNQ8N3F0 131 aa15.7■□□□□ 0.1
PCDH1-204ENST00000503492 NPC2P61916 151 aa15.69■□□□□ 0.1
PCDH1-204ENST00000503492 F8P00451 2351 aa15.69■□□□□ 0.1
PCDH1-204ENST00000503492 IGKV3OR2-268A0A0C4DH90 116 aa15.69■□□□□ 0.1
PCDH1-204ENST00000503492 PSMB2P49721 201 aa15.68■□□□□ 0.1
PCDH1-204ENST00000503492 TRRAPQ9Y4A5 3859 aa15.68■□□□□ 0.1
PCDH1-204ENST00000503492 DAND5Q8N907 189 aa15.68■□□□□ 0.1
PCDH1-204ENST00000503492 Q8NAQ8 132 aa15.67■□□□□ 0.1
PCDH1-204ENST00000503492 ZNF625Q96I27 306 aaPredicted RBP15.67■□□□□ 0.1
PCDH1-204ENST00000503492 ERG28Q9UKR5 140 aa15.67■□□□□ 0.1
PCDH1-204ENST00000503492 IGHV4-30-4P0DP06 118 aa15.67■□□□□ 0.1
PCDH1-204ENST00000503492 LYRM7Q5U5X0 104 aa15.67■□□□□ 0.1
PCDH1-204ENST00000503492 PAX4O43316 350 aa15.66■□□□□ 0.1
PCDH1-204ENST00000503492 A0A096LPF7 62 aa15.65■□□□□ 0.1
PCDH1-204ENST00000503492 H7C2G1 150 aa15.65■□□□□ 0.1
PCDH1-204ENST00000503492 TCL1BO95988 128 aa15.65■□□□□ 0.1
PCDH1-204ENST00000503492 CELA1Q9UNI1 258 aa15.65■□□□□ 0.1
PCDH1-204ENST00000503492 MIFP14174 115 aa15.64■□□□□ 0.09
PCDH1-204ENST00000503492 CIRBPQ14011 172 aaKnown RBP15.64■□□□□ 0.09
PCDH1-204ENST00000503492 TEX48A0A1B0GUV7 120 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 IFITM1P13164 125 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 DAD1P61803 113 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 CBY1Q9Y3M2 126 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 G3V4G9 280 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 PRIMA1Q86XR5 153 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 RNF183Q96D59 192 aa15.63■□□□□ 0.09
PCDH1-204ENST00000503492 SCGB1C2P0DMR2 95 aa15.62■□□□□ 0.09
PCDH1-204ENST00000503492 SH2D6Q7Z4S9 175 aa15.62■□□□□ 0.09
PCDH1-204ENST00000503492 TRBV20-1A0A075B6N2 111 aa15.61■□□□□ 0.09
PCDH1-204ENST00000503492 IGHV3OR16-9A0A0B4J2B5 98 aa15.61■□□□□ 0.09
PCDH1-204ENST00000503492 A0A0U1RRA0 63 aa15.61■□□□□ 0.09
PCDH1-204ENST00000503492 TMEM262E9PQX1 116 aa15.6■□□□□ 0.09
PCDH1-204ENST00000503492 SMCPP49901 116 aaPredicted RBP15.6■□□□□ 0.09
PCDH1-204ENST00000503492 ETDBQ3ZM63 59 aa15.6■□□□□ 0.09
PCDH1-204ENST00000503492 Q1RN00 199 aa15.6■□□□□ 0.09
PCDH1-204ENST00000503492 KRTAP24-1Q3LI83 254 aa15.6■□□□□ 0.09
PCDH1-204ENST00000503492 VPS25Q9BRG1 176 aa15.6■□□□□ 0.09
PCDH1-204ENST00000503492 LINC00959A0A1B0GUT2 108 aa15.59■□□□□ 0.09
PCDH1-204ENST00000503492 OXLD1Q5BKU9 147 aa15.59■□□□□ 0.09
PCDH1-204ENST00000503492 LINC00308Q8TCZ7 52 aa15.59■□□□□ 0.09
PCDH1-204ENST00000503492 A0A1B0GUV1 79 aa15.58■□□□□ 0.09
PCDH1-204ENST00000503492 HERV-K104P63124 156 aa15.58■□□□□ 0.09
PCDH1-204ENST00000503492 MEIG1Q5JSS6 88 aa15.58■□□□□ 0.08
PCDH1-204ENST00000503492 COX7B2Q8TF08 81 aa15.58■□□□□ 0.08
PCDH1-204ENST00000503492 ATP5G1P05496 136 aa15.57■□□□□ 0.08
PCDH1-204ENST00000503492 SPART-AS1P0CW21 52 aa15.56■□□□□ 0.08
PCDH1-204ENST00000503492 A0A087WZ39 114 aa15.56■□□□□ 0.08
PCDH1-204ENST00000503492 SOSTDC1Q6X4U4 206 aa15.56■□□□□ 0.08
PCDH1-204ENST00000503492 TRAV26-1A0A087WT03 109 aa15.55■□□□□ 0.08
PCDH1-204ENST00000503492 C5orf38Q86SI9 138 aa15.55■□□□□ 0.08
PCDH1-204ENST00000503492 TOMM7Q9P0U1 55 aa15.55■□□□□ 0.08
PCDH1-204ENST00000503492 TRBV30A0A0K0K1B3 111 aa15.55■□□□□ 0.08
PCDH1-204ENST00000503492 KRTAP10-11P60412 298 aa15.55■□□□□ 0.08
PCDH1-204ENST00000503492 TRIAP1O43715 76 aa15.54■□□□□ 0.08
PCDH1-204ENST00000503492 FLNBO75369 2602 aaKnown RBP15.54■□□□□ 0.08
PCDH1-204ENST00000503492 CLPSL2Q6UWE3 100 aa15.52■□□□□ 0.08
PCDH1-204ENST00000503492 ICOSQ9Y6W8 199 aa15.52■□□□□ 0.08
PCDH1-204ENST00000503492 HTN3P15516 51 aa15.51■□□□□ 0.07
PCDH1-204ENST00000503492 RPL13AP40429 203 aaKnown RBP15.5■□□□□ 0.07
PCDH1-204ENST00000503492 SS18Q15532 418 aa15.5■□□□□ 0.07
PCDH1-204ENST00000503492 XCL1P47992 114 aa15.5■□□□□ 0.07
PCDH1-204ENST00000503492 Q8N3U1 123 aa15.49■□□□□ 0.07
PCDH1-204ENST00000503492 COPS9Q8WXC6 57 aa15.49■□□□□ 0.07
PCDH1-204ENST00000503492 C3orf56Q8N813 242 aa15.47■□□□□ 0.07
PCDH1-204ENST00000503492 MRPL23Q16540 153 aaKnown RBP15.47■□□□□ 0.07
PCDH1-204ENST00000503492 LINC00269Q8N2A0 174 aa15.47■□□□□ 0.07
PCDH1-204ENST00000503492 ATXN8Q156A1 80 aa15.46■□□□□ 0.07
PCDH1-204ENST00000503492 SHISA2Q6UWI4 295 aa15.46■□□□□ 0.07
PCDH1-204ENST00000503492 RETNQ9HD89 108 aa15.46■□□□□ 0.07
PCDH1-204ENST00000503492 C9JAW5 83 aa15.45■□□□□ 0.06
PCDH1-204ENST00000503492 EGFEM1PQ0D2K5 195 aa15.45■□□□□ 0.06
PCDH1-204ENST00000503492 MIR7-3HGQ8N6C7 128 aa15.44■□□□□ 0.06
PCDH1-204ENST00000503492 PPDPFQ9H3Y8 114 aa15.44■□□□□ 0.06
PCDH1-204ENST00000503492 J3QR89 54 aa15.43■□□□□ 0.06
PCDH1-204ENST00000503492 SLC25A20O43772 301 aa15.43■□□□□ 0.06
PCDH1-204ENST00000503492 ANGP03950 147 aaKnown RBP15.43■□□□□ 0.06
PCDH1-204ENST00000503492 LINC01620Q4KN68 170 aa15.42■□□□□ 0.06
PCDH1-204ENST00000503492 COX6CP09669 75 aa15.42■□□□□ 0.06
PCDH1-204ENST00000503492 FOXI1Q12951 378 aa15.42■□□□□ 0.06
PCDH1-204ENST00000503492 TEN1Q86WV5 123 aa15.42■□□□□ 0.06
PCDH1-204ENST00000503492 LINC00158P58513 81 aa15.41■□□□□ 0.06
PCDH1-204ENST00000503492 REG3AQ06141 175 aa15.41■□□□□ 0.06
PCDH1-204ENST00000503492 C6orf226Q5I0X4 101 aa15.41■□□□□ 0.06
PCDH1-204ENST00000503492 LELP1Q5T871 98 aa15.41■□□□□ 0.06
PCDH1-204ENST00000503492 IBA57-AS1B1ANH7 110 aa15.4■□□□□ 0.06
PCDH1-204ENST00000503492 CLEC2BQ92478 149 aa15.4■□□□□ 0.06
PCDH1-204ENST00000503492 C11orf68Q9H3H3 251 aaKnown RBP15.4■□□□□ 0.06
PCDH1-204ENST00000503492 FBN1P35555 2871 aaKnown RBP15.4■□□□□ 0.06
PCDH1-204ENST00000503492 LINC01561Q8N1V8 128 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms