RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 OPRPNQ99935 248 aaPredicted RBP4.92□□□□□ -1.62
USP39-219ENST00000496047 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.91□□□□□ -1.62
USP39-219ENST00000496047 H3BUT2 72 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 ATP5G1P05496 136 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 SPART-AS1P0CW21 52 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 UBE2D1P51668 147 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 FXYD2P54710 66 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 FHL2Q14192 279 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 FAM222AQ5U5X8 452 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 FAM19A3Q7Z5A8 133 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 CHCHD5Q9BSY4 110 aa4.91□□□□□ -1.62
USP39-219ENST00000496047 ANK3Q12955 4377 aaKnown RBP4.9□□□□□ -1.62
USP39-219ENST00000496047 IGHV3-64A0A075B6Q5 118 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 IGLV5-45A0A087WSX0 123 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 TRBV6-8A0A0A6YYG3 113 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 A0A0J9YY99 117 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 A0A1W2PPM0 123 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 IGHV3-30-3P0DP02 117 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 IGHV4-30-4P0DP06 118 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 GYPEP15421 78 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 RNASE13Q5GAN3 156 aaKnown RBP4.9□□□□□ -1.63
USP39-219ENST00000496047 CEMP1Q6PRD7 247 aaPredicted RBP4.9□□□□□ -1.63
USP39-219ENST00000496047 SFTA2Q6UW10 78 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 VSIG2Q96IQ7 327 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 SPATA25Q9BR10 227 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 NDUFA12Q9UI09 145 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 SPCS1Q9Y6A9 102 aa4.9□□□□□ -1.63
USP39-219ENST00000496047 TRAV26-1A0A087WT03 109 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 TRAV13-1A0A0B4J241 112 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 IGHV4-28A0A0C4DH34 117 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 K7EP34 96 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 CCL25O15444 150 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 TIMM17BO60830 172 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 SPINK8P0C7L1 97 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 HERV-K104P63124 156 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 GAGE6Q13070 117 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 C12orf74Q32Q52 190 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 ZFAND6Q6FIF0 208 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 SBSPONQ8IVN8 264 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 RNF183Q96D59 192 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 CDC42SE2Q9NRR3 84 aa4.89□□□□□ -1.63
USP39-219ENST00000496047 LOC100131303A0A0U1RQF7 123 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 A0A1B0GWB2 263 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 NDUFA1O15239 70 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 LINC00694P0DN24 101 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 IFITM1P13164 125 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 TSPEAR-AS2P59090 65 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 SS18Q15532 418 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 MRPL23Q16540 153 aaKnown RBP4.88□□□□□ -1.63
USP39-219ENST00000496047 KRTAP24-1Q3LI83 254 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 NTM-AS1Q6ZSK4 140 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 SPANXDQ9BXN6 97 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 SPANXCQ9NY87 97 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 ICOSQ9Y6W8 199 aa4.88□□□□□ -1.63
USP39-219ENST00000496047 TRAV8-3A0A0A6YYJ7 113 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 A0A0J9YXY3 114 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 A8MZ25 164 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 TMEM262E9PQX1 116 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 F5H768 121 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 APOMO95445 188 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 MEIG1Q5JSS6 88 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 Q8NAQ8 132 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 Q9UF83 564 aa4.87□□□□□ -1.63
USP39-219ENST00000496047 A0A0B4J2C4 111 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 A0A1B0GUV1 79 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 IGLL5B9A064 214 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 K7ERJ3 54 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 IGHV3-30P01768 117 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 IGHV3-30-5P0DP03 117 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 MIAQ16674 131 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 Q1RN00 199 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 LINC00242Q5T6M2 205 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 CDKN2A-AS1Q9UH64 79 aa4.86□□□□□ -1.63
USP39-219ENST00000496047 IGKV3OR2-268A0A0C4DH90 116 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 SMIM1B2RUZ4 78 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 PRSS2P07478 247 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 HTN3P15516 51 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 PSMB2P49721 201 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 EGFEM1PQ0D2K5 195 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 LINC01561Q8N1V8 128 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 C10orf126Q8N4M7 172 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 C11orf68Q9H3H3 251 aaKnown RBP4.85□□□□□ -1.63
USP39-219ENST00000496047 PRO1854Q9UHT4 67 aa4.85□□□□□ -1.63
USP39-219ENST00000496047 MGAM2Q2M2H8 2515 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 LOC107984156A0A0G2JMH3 177 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 IGLV5-39A0A0G2JS06 123 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 H3BNG1 76 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 K7ERU9 68 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 COX6CP09669 75 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 MUSTN1Q8IVN3 82 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 ARL17AQ8IVW1 177 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 COX7B2Q8TF08 81 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 NAA38Q9BRA0 125 aaKnown RBP4.84□□□□□ -1.63
USP39-219ENST00000496047 Q9H8V8 135 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 ERG28Q9UKR5 140 aa4.84□□□□□ -1.63
USP39-219ENST00000496047 A4D1N5 150 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 J3QR89 54 aa4.83□□□□□ -1.64
USP39-219ENST00000496047 K7EP13 123 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 178.5 ms