RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 RBMY1DP0C7P1 496 aaKnown RBP8.32□□□□□ -1.08
HDAC4-210ENST00000493582 LINC00158P58513 81 aa8.32□□□□□ -1.08
HDAC4-210ENST00000493582 C20orf197Q8N268 126 aa8.32□□□□□ -1.08
HDAC4-210ENST00000493582 NCOR2Q9Y618 2525 aa8.32□□□□□ -1.08
HDAC4-210ENST00000493582 OVOL2Q9BRP0 275 aa8.32□□□□□ -1.08
HDAC4-210ENST00000493582 NTM-AS1Q6ZSK4 140 aa8.31□□□□□ -1.08
HDAC4-210ENST00000493582 H0YGX0 51 aa8.31□□□□□ -1.08
HDAC4-210ENST00000493582 PSMB8P28062 276 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 CCL18P55774 89 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 ENHOQ6UWT2 76 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 CDC42SE2Q9NRR3 84 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 SS18Q15532 418 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 PFN2P35080 140 aa8.3□□□□□ -1.08
HDAC4-210ENST00000493582 C11orf72Q8NBR9 251 aa8.29□□□□□ -1.08
HDAC4-210ENST00000493582 CCKP06307 115 aa8.29□□□□□ -1.08
HDAC4-210ENST00000493582 FAM19A3Q7Z5A8 133 aa8.29□□□□□ -1.08
HDAC4-210ENST00000493582 CELSR2Q9HCU4 2923 aa8.29□□□□□ -1.08
HDAC4-210ENST00000493582 PAX4O43316 350 aa8.28□□□□□ -1.08
HDAC4-210ENST00000493582 COX7B2Q8TF08 81 aa8.28□□□□□ -1.08
HDAC4-210ENST00000493582 HIVEP3Q5T1R4 2406 aa8.27□□□□□ -1.08
HDAC4-210ENST00000493582 K7ENP7 123 aa8.27□□□□□ -1.09
HDAC4-210ENST00000493582 NDUFC2O95298 119 aa8.27□□□□□ -1.09
HDAC4-210ENST00000493582 ORMDL1Q9P0S3 153 aa8.27□□□□□ -1.09
HDAC4-210ENST00000493582 LINC00336Q6ZUF6 198 aa8.27□□□□□ -1.09
HDAC4-210ENST00000493582 XCL1P47992 114 aa8.26□□□□□ -1.09
HDAC4-210ENST00000493582 XCL2Q9UBD3 114 aa8.26□□□□□ -1.09
HDAC4-210ENST00000493582 IGHV4-61A0A0C4DH41 118 aa8.26□□□□□ -1.09
HDAC4-210ENST00000493582 FAM236DA0A1B0GTK5 79 aa8.26□□□□□ -1.09
HDAC4-210ENST00000493582 FAM236CP0DP71 79 aa8.26□□□□□ -1.09
HDAC4-210ENST00000493582 RNASE1P07998 156 aaKnown RBP8.25□□□□□ -1.09
HDAC4-210ENST00000493582 TRGV1A0A0A0MS02 117 aa8.25□□□□□ -1.09
HDAC4-210ENST00000493582 MRAPQ8TCY5 172 aa8.25□□□□□ -1.09
HDAC4-210ENST00000493582 TMEM89A2RUT3 159 aa8.24□□□□□ -1.09
HDAC4-210ENST00000493582 NDUFC2-KCTD14E9PQ53 114 aa8.24□□□□□ -1.09
HDAC4-210ENST00000493582 Q6ZTI0 123 aa8.24□□□□□ -1.09
HDAC4-210ENST00000493582 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
HDAC4-210ENST00000493582 UBE2L6O14933 153 aa8.23□□□□□ -1.09
HDAC4-210ENST00000493582 DEFB136Q30KP8 78 aa8.23□□□□□ -1.09
HDAC4-210ENST00000493582 H7BZZ5 65 aa8.23□□□□□ -1.09
HDAC4-210ENST00000493582 UBE2E2Q96LR5 201 aa8.23□□□□□ -1.09
HDAC4-210ENST00000493582 AVPP01185 164 aa8.22□□□□□ -1.09
HDAC4-210ENST00000493582 IGHV4-59P01825 116 aa8.22□□□□□ -1.09
HDAC4-210ENST00000493582 PRR3P79522 188 aaKnown RBP8.22□□□□□ -1.09
HDAC4-210ENST00000493582 S100A7L2Q5SY68 101 aa8.22□□□□□ -1.09
HDAC4-210ENST00000493582 SLURP1P55000 103 aa8.21□□□□□ -1.09
HDAC4-210ENST00000493582 SNURFQ9Y675 71 aa8.21□□□□□ -1.09
HDAC4-210ENST00000493582 K7EQD1 137 aa8.21□□□□□ -1.1
HDAC4-210ENST00000493582 C1orf43Q9BWL3 253 aa8.21□□□□□ -1.1
HDAC4-210ENST00000493582 TRBV6-4A0A1B0GX49 114 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 UCNP55089 124 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 C18orf65Q6ZTR6 163 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 PRO0628Q9UI54 55 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 JMJD7-PLA2G4BH0Y9G9 81 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 UBL5Q9BZL1 73 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 A8MTW9 85 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 IBA57-AS1B1ANH7 110 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 ATP5EP2Q5VTU8 51 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 LYPD5Q6UWN5 251 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 SERP1Q9Y6X1 66 aa8.2□□□□□ -1.1
HDAC4-210ENST00000493582 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 INSP01308 110 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 Q8N814 137 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 PIEZO1Q92508 2521 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 IGLV4-60A0A075B6I1 120 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 MAP6D1Q9H9H5 199 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 MYO9AB2RTY4 2548 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 ZANQ9Y493 2812 aa8.19□□□□□ -1.1
HDAC4-210ENST00000493582 A0A096LNT2 108 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 EPM2AB3EWF7 344 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 PKIGQ9Y2B9 76 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 IGHV3OR16-9A0A0B4J2B5 98 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 J3QLI3 93 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 WFDC11Q8NEX6 87 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 RMI2Q96E14 147 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 TRAV10A0A0B4J240 114 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 NBL1P41271 181 aa8.18□□□□□ -1.1
HDAC4-210ENST00000493582 USP9YO00507 2555 aaPredicted RBP8.17□□□□□ -1.1
HDAC4-210ENST00000493582 WNK1Q9H4A3 2382 aa8.17□□□□□ -1.1
HDAC4-210ENST00000493582 TMEM256-PLSCR3K7ERE1 68 aa8.17□□□□□ -1.1
HDAC4-210ENST00000493582 RPL35AP18077 110 aaKnown RBP8.17□□□□□ -1.1
HDAC4-210ENST00000493582 FP248Q71RG6 208 aaPredicted RBP8.17□□□□□ -1.1
HDAC4-210ENST00000493582 TRBV10-1A0A0K0K1A3 114 aa8.17□□□□□ -1.1
HDAC4-210ENST00000493582 C6orf226Q5I0X4 101 aa8.17□□□□□ -1.1
HDAC4-210ENST00000493582 JMJD1CQ15652 2540 aa8.17□□□□□ -1.1
HDAC4-210ENST00000493582 M0R2N4 97 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 LY6G6DO95868 133 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 NANOS2P60321 138 aaKnown RBP8.16□□□□□ -1.1
HDAC4-210ENST00000493582 DEFB112Q30KQ8 113 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 TRAV7A0A075B6U4 112 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 HAMPP81172 84 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 KHDC1LQ5JSQ8 128 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 LINC00167Q96N53 147 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 C16orf95Q9H693 158 aa8.16□□□□□ -1.1
HDAC4-210ENST00000493582 MXRA5Q9NR99 2828 aa8.15□□□□□ -1.1
HDAC4-210ENST00000493582 TRBV10-3A0A0K0K1G6 114 aa8.15□□□□□ -1.1
HDAC4-210ENST00000493582 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
HDAC4-210ENST00000493582 F8WEM9 126 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms