RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 MYO9AB2RTY4 2548 aa13.92□□□□□ -0.18
SNAPC3-206ENST00000490969 LINC00242Q5T6M2 205 aa13.92□□□□□ -0.18
SNAPC3-206ENST00000490969 NF1P21359 2839 aa13.91□□□□□ -0.18
SNAPC3-206ENST00000490969 PIK3CD-AS1Q5SR53 167 aa13.91□□□□□ -0.18
SNAPC3-206ENST00000490969 IGHV3-53P01767 116 aa13.91□□□□□ -0.18
SNAPC3-206ENST00000490969 INAFM2P0DMQ5 153 aa13.91□□□□□ -0.18
SNAPC3-206ENST00000490969 ZNF415Q09FC8 603 aa13.9□□□□□ -0.18
SNAPC3-206ENST00000490969 GAGE2AQ6NT46 116 aa13.9□□□□□ -0.18
SNAPC3-206ENST00000490969 SMIM1B2RUZ4 78 aa13.9□□□□□ -0.18
SNAPC3-206ENST00000490969 MTORP42345 2549 aa13.9□□□□□ -0.18
SNAPC3-206ENST00000490969 COX7CP15954 63 aa13.89□□□□□ -0.19
SNAPC3-206ENST00000490969 PRIMA1Q86XR5 153 aa13.89□□□□□ -0.19
SNAPC3-206ENST00000490969 KLK5Q9Y337 293 aaPredicted RBP13.89□□□□□ -0.19
SNAPC3-206ENST00000490969 FSHBP01225 129 aa13.89□□□□□ -0.19
SNAPC3-206ENST00000490969 J3QLI3 93 aa13.87□□□□□ -0.19
SNAPC3-206ENST00000490969 LOC107984640A0A0U1RRK4 108 aa13.87□□□□□ -0.19
SNAPC3-206ENST00000490969 C2orf48Q96LS8 159 aa13.87□□□□□ -0.19
SNAPC3-206ENST00000490969 Q9HAA7 133 aa13.87□□□□□ -0.19
SNAPC3-206ENST00000490969 RBMY1BA6NDE4 496 aaKnown RBP13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 RBMY1EA6NEQ0 496 aaKnown RBP13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 RBMY1DP0C7P1 496 aaKnown RBP13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 MALP21145 153 aa13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 DEFB131AP59861 70 aa13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 HIST1H4AP62805 103 aaKnown RBP13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 CSDC2Q9Y534 153 aaKnown RBP13.86□□□□□ -0.19
SNAPC3-206ENST00000490969 HIST2H2BDQ6DRA6 164 aa13.85□□□□□ -0.19
SNAPC3-206ENST00000490969 FAM19A3Q7Z5A8 133 aa13.85□□□□□ -0.19
SNAPC3-206ENST00000490969 TRAV13-1A0A0B4J241 112 aa13.84□□□□□ -0.19
SNAPC3-206ENST00000490969 A8MTW9 85 aa13.84□□□□□ -0.19
SNAPC3-206ENST00000490969 CRYGAP11844 174 aa13.84□□□□□ -0.19
SNAPC3-206ENST00000490969 C11orf72Q8NBR9 251 aa13.84□□□□□ -0.19
SNAPC3-206ENST00000490969 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.2
SNAPC3-206ENST00000490969 J3KT08 172 aa13.83□□□□□ -0.2
SNAPC3-206ENST00000490969 ATOX1O00244 68 aa13.83□□□□□ -0.2
SNAPC3-206ENST00000490969 A0A1B0GX51 115 aa13.83□□□□□ -0.2
SNAPC3-206ENST00000490969 HOXD3P31249 432 aaPredicted RBP13.83□□□□□ -0.2
SNAPC3-206ENST00000490969 TMEM89A2RUT3 159 aa13.82□□□□□ -0.2
SNAPC3-206ENST00000490969 RPL28P46779 137 aaKnown RBP13.82□□□□□ -0.2
SNAPC3-206ENST00000490969 RS1O15537 224 aa13.82□□□□□ -0.2
SNAPC3-206ENST00000490969 F5H768 121 aa13.81□□□□□ -0.2
SNAPC3-206ENST00000490969 SETD2Q9BYW2 2564 aaPredicted RBP13.81□□□□□ -0.2
SNAPC3-206ENST00000490969 TRAV13-2A0A0B4J235 113 aa13.81□□□□□ -0.2
SNAPC3-206ENST00000490969 PF4P02776 101 aa13.81□□□□□ -0.2
SNAPC3-206ENST00000490969 Q6YL49 198 aa13.8□□□□□ -0.2
SNAPC3-206ENST00000490969 CRPP02741 224 aa13.8□□□□□ -0.2
SNAPC3-206ENST00000490969 KRTAP1-1Q07627 177 aa13.8□□□□□ -0.2
SNAPC3-206ENST00000490969 DNAL4O96015 105 aa13.79□□□□□ -0.2
SNAPC3-206ENST00000490969 hADV29S1A0JD25 119 aa13.78□□□□□ -0.2
SNAPC3-206ENST00000490969 OTOGQ6ZRI0 2925 aa13.78□□□□□ -0.2
SNAPC3-206ENST00000490969 LINC00337Q8N6G1 96 aa13.78□□□□□ -0.2
SNAPC3-206ENST00000490969 FAM19A5Q7Z5A7 132 aaPredicted RBP13.77□□□□□ -0.21
SNAPC3-206ENST00000490969 RPL18AQ02543 176 aaKnown RBP13.77□□□□□ -0.21
SNAPC3-206ENST00000490969 C9orf129Q5T035 196 aaKnown RBP13.77□□□□□ -0.21
SNAPC3-206ENST00000490969 OVOL2Q9BRP0 275 aa13.77□□□□□ -0.21
SNAPC3-206ENST00000490969 C14orf132Q9NPU4 83 aa13.76□□□□□ -0.21
SNAPC3-206ENST00000490969 A0A087WYN8 130 aa13.75□□□□□ -0.21
SNAPC3-206ENST00000490969 IGKV2-28A0A075B6P5 120 aa13.75□□□□□ -0.21
SNAPC3-206ENST00000490969 IGKV2D-28P01615 120 aa13.75□□□□□ -0.21
SNAPC3-206ENST00000490969 CDC42SE2Q9NRR3 84 aa13.75□□□□□ -0.21
SNAPC3-206ENST00000490969 NTM-AS1Q6ZSK4 140 aa13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 CYSTM1Q9H1C7 97 aa13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 IGKV3D-7A0A0C4DH55 119 aa13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 RPS28P62857 69 aaKnown RBP13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 SMR3AQ99954 134 aa13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 SND1-IT1Q9HBX3 110 aa13.74□□□□□ -0.21
SNAPC3-206ENST00000490969 MIR7-3HGQ8N6C7 128 aa13.73□□□□□ -0.21
SNAPC3-206ENST00000490969 Q6JHZ5 121 aa13.73□□□□□ -0.21
SNAPC3-206ENST00000490969 SMIM11BQ8TCY0 68 aa13.73□□□□□ -0.21
SNAPC3-206ENST00000490969 ZNF702PQ9H963 129 aa13.73□□□□□ -0.21
SNAPC3-206ENST00000490969 INSP01308 110 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 UBE2E2Q96LR5 201 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 SMIM9A6NGZ8 99 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 SLURP1P55000 103 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 C5orf47Q569G3 176 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 LINC00846Q9NV44 126 aa13.72□□□□□ -0.21
SNAPC3-206ENST00000490969 RPL36AP83881 106 aaKnown RBP13.71□□□□□ -0.21
SNAPC3-206ENST00000490969 RPL36ALQ969Q0 106 aaKnown RBP13.71□□□□□ -0.21
SNAPC3-206ENST00000490969 OBSCN-AS1Q96MR7 158 aa13.71□□□□□ -0.21
SNAPC3-206ENST00000490969 MAP6D1Q9H9H5 199 aa13.7□□□□□ -0.22
SNAPC3-206ENST00000490969 DEFB136Q30KP8 78 aa13.69□□□□□ -0.22
SNAPC3-206ENST00000490969 SERP2Q8N6R1 65 aa13.69□□□□□ -0.22
SNAPC3-206ENST00000490969 H0YGX0 51 aa13.69□□□□□ -0.22
SNAPC3-206ENST00000490969 COX7B2Q8TF08 81 aa13.69□□□□□ -0.22
SNAPC3-206ENST00000490969 A0A087WVE0 104 aa13.68□□□□□ -0.22
SNAPC3-206ENST00000490969 TRGV1A0A0A0MS02 117 aa13.68□□□□□ -0.22
SNAPC3-206ENST00000490969 K7EQD1 137 aa13.68□□□□□ -0.22
SNAPC3-206ENST00000490969 TRBV10-1A0A0K0K1A3 114 aa13.68□□□□□ -0.22
SNAPC3-206ENST00000490969 ESM1Q9NQ30 184 aa13.68□□□□□ -0.22
SNAPC3-206ENST00000490969 FLNBO75369 2602 aaKnown RBP13.67□□□□□ -0.22
SNAPC3-206ENST00000490969 TMEM258P61165 79 aa13.67□□□□□ -0.22
SNAPC3-206ENST00000490969 UPK3BQ9BT76 320 aa13.67□□□□□ -0.22
SNAPC3-206ENST00000490969 LECT2O14960 151 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 C18orf65Q6ZTR6 163 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 TOMM7Q9P0U1 55 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 HIVEP2P31629 2446 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 LINC00158P58513 81 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 LINC01561Q8N1V8 128 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 XCL2Q9UBD3 114 aa13.66□□□□□ -0.22
SNAPC3-206ENST00000490969 OR13C6PQ8NH95 151 aa13.65□□□□□ -0.22
SNAPC3-206ENST00000490969 NCR3O14931 201 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 336.5 ms