RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
COL16A1-215ENST00000488897 MT-ATP8P03928 68 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 EGFEM1PQ0D2K5 195 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 IGHV3-38A0A0C4DH36 116 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 TIMM17BO60830 172 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 RPL35AP18077 110 aaKnown RBP13.07□□□□□ -0.32
COL16A1-215ENST00000488897 XGP55808 180 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 CKS1BP61024 79 aa13.07□□□□□ -0.32
COL16A1-215ENST00000488897 WIPF1O43516 503 aa13.06□□□□□ -0.32
COL16A1-215ENST00000488897 TRIAP1O43715 76 aa13.06□□□□□ -0.32
COL16A1-215ENST00000488897 DEFB121Q5J5C9 76 aa13.06□□□□□ -0.32
COL16A1-215ENST00000488897 DGAT2L7PQ6IED9 249 aa13.05□□□□□ -0.32
COL16A1-215ENST00000488897 IFITM1P13164 125 aa13.05□□□□□ -0.32
COL16A1-215ENST00000488897 MRAPQ8TCY5 172 aa13.05□□□□□ -0.32
COL16A1-215ENST00000488897 TENM3Q9P273 2699 aa13.05□□□□□ -0.32
COL16A1-215ENST00000488897 IGLV5-45A0A087WSX0 123 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 A8MZ25 164 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 COX6CP09669 75 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 TRAV25A0A0B4J276 109 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 TRBV10-2A0A0K0K1G8 114 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 K7EIL1 84 aa13.04□□□□□ -0.32
COL16A1-215ENST00000488897 CDKN2A-AS1Q9UH64 79 aa13.03□□□□□ -0.32
COL16A1-215ENST00000488897 TGP01266 2768 aa13.03□□□□□ -0.32
COL16A1-215ENST00000488897 NDUFA1O15239 70 aa13.02□□□□□ -0.32
COL16A1-215ENST00000488897 IGHV4-30-4P0DP06 118 aa13.02□□□□□ -0.32
COL16A1-215ENST00000488897 NTN5Q8WTR8 489 aaPredicted RBP13.02□□□□□ -0.33
COL16A1-215ENST00000488897 XCL2Q9UBD3 114 aa13.02□□□□□ -0.33
COL16A1-215ENST00000488897 CIRBPQ14011 172 aaKnown RBP13.01□□□□□ -0.33
COL16A1-215ENST00000488897 TMEM101Q96IK0 257 aa13.01□□□□□ -0.33
COL16A1-215ENST00000488897 HERVK_113P63121 156 aa13.01□□□□□ -0.33
COL16A1-215ENST00000488897 STHQ8IWL8 128 aa13.01□□□□□ -0.33
COL16A1-215ENST00000488897 FBN3Q75N90 2809 aa13□□□□□ -0.33
COL16A1-215ENST00000488897 RPL13AP40429 203 aaKnown RBP13□□□□□ -0.33
COL16A1-215ENST00000488897 NPC2P61916 151 aa13□□□□□ -0.33
COL16A1-215ENST00000488897 IGHV3OR16-12A0A075B7B8 117 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 TRGV1A0A0A0MS02 117 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 IL17DQ8TAD2 202 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 TRBV10-1A0A0K0K1A3 114 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 RPL36AP83881 106 aaKnown RBP12.98□□□□□ -0.33
COL16A1-215ENST00000488897 FAM19A3Q7Z5A8 133 aa12.98□□□□□ -0.33
COL16A1-215ENST00000488897 RPL36ALQ969Q0 106 aaKnown RBP12.98□□□□□ -0.33
COL16A1-215ENST00000488897 CSDC2Q9Y534 153 aaKnown RBP12.98□□□□□ -0.33
COL16A1-215ENST00000488897 IGLV5-39A0A0G2JS06 123 aa12.97□□□□□ -0.33
COL16A1-215ENST00000488897 COX6A2Q02221 97 aa12.97□□□□□ -0.33
COL16A1-215ENST00000488897 KPRPQ5T749 579 aaPredicted RBP12.97□□□□□ -0.33
COL16A1-215ENST00000488897 C2orf82Q6UX34 121 aa12.97□□□□□ -0.33
COL16A1-215ENST00000488897 H3BT86 120 aa12.97□□□□□ -0.33
COL16A1-215ENST00000488897 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
COL16A1-215ENST00000488897 DAZ2Q13117 558 aaKnown RBP12.96□□□□□ -0.33
COL16A1-215ENST00000488897 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
COL16A1-215ENST00000488897 UBE2WQ96B02 151 aa12.96□□□□□ -0.33
COL16A1-215ENST00000488897 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
COL16A1-215ENST00000488897 H7C423 109 aa12.96□□□□□ -0.34
COL16A1-215ENST00000488897 K7EQD1 137 aa12.95□□□□□ -0.34
COL16A1-215ENST00000488897 COPS9Q8WXC6 57 aa12.95□□□□□ -0.34
COL16A1-215ENST00000488897 RETNQ9HD89 108 aa12.95□□□□□ -0.34
COL16A1-215ENST00000488897 TEX49A0A1B0GTD5 131 aa12.94□□□□□ -0.34
COL16A1-215ENST00000488897 LST1O00453 97 aa12.94□□□□□ -0.34
COL16A1-215ENST00000488897 Q9H8V8 135 aa12.94□□□□□ -0.34
COL16A1-215ENST00000488897 DAND5Q8N907 189 aa12.94□□□□□ -0.34
COL16A1-215ENST00000488897 DNAH9Q9NYC9 4486 aa12.93□□□□□ -0.34
COL16A1-215ENST00000488897 TRAV8-4A0A0B4J246 113 aa12.93□□□□□ -0.34
COL16A1-215ENST00000488897 TRAV4A0A0B4J268 109 aa12.93□□□□□ -0.34
COL16A1-215ENST00000488897 GIG44P09565 113 aaPredicted RBP12.93□□□□□ -0.34
COL16A1-215ENST00000488897 LINC00694P0DN24 101 aa12.93□□□□□ -0.34
COL16A1-215ENST00000488897 LINC00308Q8TCZ7 52 aa12.93□□□□□ -0.34
COL16A1-215ENST00000488897 CLEC2BQ92478 149 aa12.92□□□□□ -0.34
COL16A1-215ENST00000488897 CFAP161Q6P656 301 aa12.92□□□□□ -0.34
COL16A1-215ENST00000488897 FAM110AQ9BQ89 295 aa12.92□□□□□ -0.34
COL16A1-215ENST00000488897 HUWE1Q7Z6Z7 4374 aaKnown RBP12.92□□□□□ -0.34
COL16A1-215ENST00000488897 Q6ZTI0 123 aa12.91□□□□□ -0.34
COL16A1-215ENST00000488897 SMIM1B2RUZ4 78 aa12.91□□□□□ -0.34
COL16A1-215ENST00000488897 SNCGO76070 127 aa12.91□□□□□ -0.34
COL16A1-215ENST00000488897 NTM-AS1Q6ZSK4 140 aa12.91□□□□□ -0.34
COL16A1-215ENST00000488897 TRAV13-1A0A0B4J241 112 aa12.9□□□□□ -0.34
COL16A1-215ENST00000488897 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
COL16A1-215ENST00000488897 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
COL16A1-215ENST00000488897 CDC42SE2Q9NRR3 84 aa12.9□□□□□ -0.34
COL16A1-215ENST00000488897 GAGE12JA6NER3 117 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 GAGE4Q13068 117 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 GAGE5Q13069 117 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 ZNF625Q96I27 306 aaPredicted RBP12.88□□□□□ -0.35
COL16A1-215ENST00000488897 HERV-K104P63124 156 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 GAGE2BQ13066 116 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 GAGE2EQ4V326 116 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 GAGE2DQ9UEU5 116 aa12.88□□□□□ -0.35
COL16A1-215ENST00000488897 DEFB4AO15263 64 aa12.87□□□□□ -0.35
COL16A1-215ENST00000488897 MEIG1Q5JSS6 88 aa12.87□□□□□ -0.35
COL16A1-215ENST00000488897 UBE2L6O14933 153 aa12.87□□□□□ -0.35
COL16A1-215ENST00000488897 NOP10Q9NPE3 64 aaKnown RBP12.87□□□□□ -0.35
COL16A1-215ENST00000488897 F5H768 121 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 A0A0U1RRA0 63 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 ANAPC13Q9BS18 74 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 PPDPFQ9H3Y8 114 aa12.86□□□□□ -0.35
COL16A1-215ENST00000488897 COX7A2LO14548 114 aa12.84□□□□□ -0.35
COL16A1-215ENST00000488897 STAB2Q8WWQ8 2551 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms