RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 LGALS3P17931 250 aaKnown RBP6.46□□□□□ -1.37
SF3B1-211ENST00000487698 HSD52Q0P140 79 aa6.46□□□□□ -1.37
SF3B1-211ENST00000487698 BVES-AS1Q5T3Y7 98 aa6.46□□□□□ -1.37
SF3B1-211ENST00000487698 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
SF3B1-211ENST00000487698 LINC00959A0A1B0GUT2 108 aa6.46□□□□□ -1.38
SF3B1-211ENST00000487698 SMIM1B2RUZ4 78 aa6.46□□□□□ -1.38
SF3B1-211ENST00000487698 BATFQ16520 125 aa6.46□□□□□ -1.38
SF3B1-211ENST00000487698 MEGF8Q7Z7M0 2845 aa6.45□□□□□ -1.38
SF3B1-211ENST00000487698 IGHV3OR16-9A0A0B4J2B5 98 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 IGKV3OR2-268A0A0C4DH90 116 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 CCL25O15444 150 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 ESRGQ1W209 222 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 ZFAND6Q6FIF0 208 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 LINC00269Q8N2A0 174 aa6.44□□□□□ -1.38
SF3B1-211ENST00000487698 ANGP03950 147 aaKnown RBP6.43□□□□□ -1.38
SF3B1-211ENST00000487698 TAL2Q16559 108 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 CLPSL2Q6UWE3 100 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 WFDC10BQ8IUB3 73 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 C10orf126Q8N4M7 172 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 A0A087WZ39 114 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 REG3AQ06141 175 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 SS18Q15532 418 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 COL5A1-AS1Q5SY13 56 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 SCGB1D4Q6XE38 83 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 PRR34Q9NV39 138 aa6.43□□□□□ -1.38
SF3B1-211ENST00000487698 TM2D2Q9BX73 214 aa6.42□□□□□ -1.38
SF3B1-211ENST00000487698 NDUFA1O15239 70 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 NHLRC4P0CG21 123 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-211ENST00000487698 ORAOV1Q8WV07 137 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 SPANXB1Q9NS25 103 aaPredicted RBP6.41□□□□□ -1.38
SF3B1-211ENST00000487698 NDUFA12Q9UI09 145 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 XCL1P47992 114 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 CEND1Q8N111 149 aa6.41□□□□□ -1.38
SF3B1-211ENST00000487698 DYNC2H1Q8NCM8 4307 aaKnown RBP6.4□□□□□ -1.38
SF3B1-211ENST00000487698 FXYD2P54710 66 aa6.4□□□□□ -1.38
SF3B1-211ENST00000487698 CHCHD10Q8WYQ3 142 aaPredicted RBP6.4□□□□□ -1.38
SF3B1-211ENST00000487698 HIST1H4GQ99525 98 aa6.4□□□□□ -1.38
SF3B1-211ENST00000487698 LITAFQ99732 161 aa6.4□□□□□ -1.38
SF3B1-211ENST00000487698 KLK12Q9UKR0 248 aa6.4□□□□□ -1.38
SF3B1-211ENST00000487698 IGHV3-30P01768 117 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 IGHV3-33P01772 117 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 IGHV3-30-5P0DP03 117 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 GCSHP23434 173 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 CD164L2Q6UWJ8 174 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 ENHOQ6UWT2 76 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 LINC01561Q8N1V8 128 aa6.4□□□□□ -1.39
SF3B1-211ENST00000487698 ZNF625Q96I27 306 aaPredicted RBP6.4□□□□□ -1.39
SF3B1-211ENST00000487698 K7EP13 123 aa6.39□□□□□ -1.39
SF3B1-211ENST00000487698 LINC01556Q5JQF7 62 aa6.39□□□□□ -1.39
SF3B1-211ENST00000487698 C5orf38Q86SI9 138 aa6.39□□□□□ -1.39
SF3B1-211ENST00000487698 A0A1B0GV90 55 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 Q9H8V8 135 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 IGLV10-54A0A075B6I4 117 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 A6NDN8 102 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 IGLL5B9A064 214 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 TMEM238C9JI98 176 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 FOXI1Q12951 378 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 LINC00588Q9Y4M8 146 aa6.38□□□□□ -1.39
SF3B1-211ENST00000487698 TIMM17BO60830 172 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 DNAH10OSP0CZ25 163 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
SF3B1-211ENST00000487698 DNAH7Q8WXX0 4024 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 CSMD3Q7Z407 3707 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 COX7A2LO14548 114 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 TAX1BP3O14907 124 aa6.37□□□□□ -1.39
SF3B1-211ENST00000487698 TRAV8-4A0A0B4J246 113 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 CRPP02741 224 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 HERV-K104P63124 156 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 MIAQ16674 131 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 ADAMTSL4-AS1Q5T5F5 129 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 UBE2WQ96B02 151 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 SPANXDQ9BXN6 97 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 SPANXCQ9NY87 97 aa6.36□□□□□ -1.39
SF3B1-211ENST00000487698 A0A1B0GWB2 263 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 GAGE12HA6NDE8 117 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 PTTG1IPP53801 180 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 CCL18P55774 89 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 Q8IZM0 81 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 TOMM7Q9P0U1 55 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 Q6ZVH6 145 aa6.35□□□□□ -1.39
SF3B1-211ENST00000487698 FBN3Q75N90 2809 aa6.34□□□□□ -1.39
SF3B1-211ENST00000487698 K7ERJ3 54 aa6.34□□□□□ -1.39
SF3B1-211ENST00000487698 KIAA0087Q14695 138 aa6.34□□□□□ -1.39
SF3B1-211ENST00000487698 NHP2Q9NX24 153 aaKnown RBP6.34□□□□□ -1.39
SF3B1-211ENST00000487698 APLNQ9ULZ1 77 aa6.34□□□□□ -1.39
SF3B1-211ENST00000487698 COX11Q9Y6N1 276 aa6.34□□□□□ -1.39
SF3B1-211ENST00000487698 TMEM238LA0A1B0GVL6 79 aa6.34□□□□□ -1.4
SF3B1-211ENST00000487698 A6NJY4 79 aa6.34□□□□□ -1.4
SF3B1-211ENST00000487698 SFTA2Q6UW10 78 aa6.34□□□□□ -1.4
SF3B1-211ENST00000487698 MUSTN1Q8IVN3 82 aa6.33□□□□□ -1.4
SF3B1-211ENST00000487698 KLK5Q9Y337 293 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-211ENST00000487698 DNAH1Q9P2D7 4330 aa6.33□□□□□ -1.4
SF3B1-211ENST00000487698 SMIM13P0DJ93 91 aa6.32□□□□□ -1.4
SF3B1-211ENST00000487698 MALP21145 153 aa6.32□□□□□ -1.4
SF3B1-211ENST00000487698 CIRBPQ14011 172 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 220 ms