RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 CCL25O15444 150 aa14.9□□□□□ -0.02
TRADD-202ENST00000486556 SPINK8P0C7L1 97 aa14.9□□□□□ -0.02
TRADD-202ENST00000486556 MGAM2Q2M2H8 2515 aa14.88□□□□□ -0.03
TRADD-202ENST00000486556 LINC00959A0A1B0GUT2 108 aa14.88□□□□□ -0.03
TRADD-202ENST00000486556 PTTG1IPP53801 180 aa14.88□□□□□ -0.03
TRADD-202ENST00000486556 IGLV5-39A0A0G2JS06 123 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 HIST1H4GQ99525 98 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 TM2D2Q9BX73 214 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 TRAV10A0A0B4J240 114 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 IGKV3OR2-268A0A0C4DH90 116 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 CEND1Q8N111 149 aa14.87□□□□□ -0.03
TRADD-202ENST00000486556 SS18Q15532 418 aa14.86□□□□□ -0.03
TRADD-202ENST00000486556 A6NDN8 102 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 SMIM1B2RUZ4 78 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 ZFAND6Q6FIF0 208 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 IGHV3OR16-9A0A0B4J2B5 98 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 GCSHP23434 173 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 B9D2Q9BPU9 175 aa14.85□□□□□ -0.03
TRADD-202ENST00000486556 SPANXB1Q9NS25 103 aaPredicted RBP14.85□□□□□ -0.03
TRADD-202ENST00000486556 NDUFA12Q9UI09 145 aa14.84□□□□□ -0.03
TRADD-202ENST00000486556 ANGP03950 147 aaKnown RBP14.83□□□□□ -0.04
TRADD-202ENST00000486556 VAMP3Q15836 100 aa14.83□□□□□ -0.04
TRADD-202ENST00000486556 LINC00269Q8N2A0 174 aa14.83□□□□□ -0.04
TRADD-202ENST00000486556 SRSF9Q13242 221 aaKnown RBP eCLIP14.82□□□□□ -0.04
TRADD-202ENST00000486556 TENM3Q9P273 2699 aa14.81□□□□□ -0.04
TRADD-202ENST00000486556 A0A087WZ39 114 aa14.81□□□□□ -0.04
TRADD-202ENST00000486556 C10orf126Q8N4M7 172 aa14.81□□□□□ -0.04
TRADD-202ENST00000486556 DNHD1Q96M86 4753 aa14.81□□□□□ -0.04
TRADD-202ENST00000486556 A0A0J9YXY3 114 aa14.8□□□□□ -0.04
TRADD-202ENST00000486556 REG3AQ06141 175 aa14.8□□□□□ -0.04
TRADD-202ENST00000486556 C15orf53Q8NAA6 179 aa14.8□□□□□ -0.04
TRADD-202ENST00000486556 NDUFA1O15239 70 aa14.8□□□□□ -0.04
TRADD-202ENST00000486556 FXYD2P54710 66 aa14.8□□□□□ -0.04
TRADD-202ENST00000486556 HUWE1Q7Z6Z7 4374 aaKnown RBP14.79□□□□□ -0.04
TRADD-202ENST00000486556 ESRGQ1W209 222 aa14.78□□□□□ -0.04
TRADD-202ENST00000486556 LINC01561Q8N1V8 128 aa14.78□□□□□ -0.04
TRADD-202ENST00000486556 TMEM238C9JI98 176 aa14.78□□□□□ -0.04
TRADD-202ENST00000486556 Q8N3U1 123 aa14.77□□□□□ -0.05
TRADD-202ENST00000486556 PRR34Q9NV39 138 aa14.77□□□□□ -0.05
TRADD-202ENST00000486556 XCL1P47992 114 aa14.76□□□□□ -0.05
TRADD-202ENST00000486556 CLPSL2Q6UWE3 100 aa14.76□□□□□ -0.05
TRADD-202ENST00000486556 CD164L2Q6UWJ8 174 aa14.76□□□□□ -0.05
TRADD-202ENST00000486556 C9orf118A6NHY6 69 aa14.75□□□□□ -0.05
TRADD-202ENST00000486556 IGHV3-30P01768 117 aa14.75□□□□□ -0.05
TRADD-202ENST00000486556 SMIM13P0DJ93 91 aa14.75□□□□□ -0.05
TRADD-202ENST00000486556 IGHV3-30-5P0DP03 117 aa14.75□□□□□ -0.05
TRADD-202ENST00000486556 TMEM238LA0A1B0GVL6 79 aa14.74□□□□□ -0.05
TRADD-202ENST00000486556 A6NJY4 79 aa14.74□□□□□ -0.05
TRADD-202ENST00000486556 TIMM17BO60830 172 aa14.74□□□□□ -0.05
TRADD-202ENST00000486556 NHLRC4P0CG21 123 aaPredicted RBP14.74□□□□□ -0.05
TRADD-202ENST00000486556 C5orf38Q86SI9 138 aa14.74□□□□□ -0.05
TRADD-202ENST00000486556 K7EP13 123 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 HERV-K104P63124 156 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 COX7B2Q8TF08 81 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 CHCHD10Q8WYQ3 142 aaPredicted RBP14.73□□□□□ -0.05
TRADD-202ENST00000486556 Q9H8V8 135 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 KLK12Q9UKR0 248 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 WFDC10BQ8IUB3 73 aa14.73□□□□□ -0.05
TRADD-202ENST00000486556 ZNF625Q96I27 306 aaPredicted RBP14.73□□□□□ -0.05
TRADD-202ENST00000486556 CIRBPQ14011 172 aaKnown RBP14.72□□□□□ -0.05
TRADD-202ENST00000486556 LITAFQ99732 161 aa14.72□□□□□ -0.05
TRADD-202ENST00000486556 NHP2Q9NX24 153 aaKnown RBP14.71□□□□□ -0.05
TRADD-202ENST00000486556 IGHV3-33P01772 117 aa14.71□□□□□ -0.06
TRADD-202ENST00000486556 SPANXDQ9BXN6 97 aa14.71□□□□□ -0.06
TRADD-202ENST00000486556 SPANXCQ9NY87 97 aa14.71□□□□□ -0.06
TRADD-202ENST00000486556 TRAV8-4A0A0B4J246 113 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 A0A1B0GWB2 263 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 COX7A2LO14548 114 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 SFTA2Q6UW10 78 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 ENHOQ6UWT2 76 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 TOMM7Q9P0U1 55 aa14.69□□□□□ -0.06
TRADD-202ENST00000486556 IGLV10-54A0A075B6I4 117 aa14.68□□□□□ -0.06
TRADD-202ENST00000486556 CRPP02741 224 aa14.68□□□□□ -0.06
TRADD-202ENST00000486556 LINC01556Q5JQF7 62 aa14.68□□□□□ -0.06
TRADD-202ENST00000486556 RPL24P83731 157 aaKnown RBP14.67□□□□□ -0.06
TRADD-202ENST00000486556 ADAMTSL4-AS1Q5T5F5 129 aa14.67□□□□□ -0.06
TRADD-202ENST00000486556 IGLL5B9A064 214 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 MUSTN1Q8IVN3 82 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 DNAH9Q9NYC9 4486 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 H3BUT2 72 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 FOXI1Q12951 378 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 MIAQ16674 131 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 Q8IZM0 81 aa14.66□□□□□ -0.06
TRADD-202ENST00000486556 GAGE10A6NGK3 116 aa14.65□□□□□ -0.06
TRADD-202ENST00000486556 IFITM1P13164 125 aa14.65□□□□□ -0.06
TRADD-202ENST00000486556 CCL18P55774 89 aa14.65□□□□□ -0.06
TRADD-202ENST00000486556 C6orf226Q5I0X4 101 aa14.65□□□□□ -0.06
TRADD-202ENST00000486556 RAB37Q96AX2 223 aa14.65□□□□□ -0.06
TRADD-202ENST00000486556 PRSS2P07478 247 aa14.64□□□□□ -0.07
TRADD-202ENST00000486556 MALP21145 153 aa14.64□□□□□ -0.07
TRADD-202ENST00000486556 UBE2WQ96B02 151 aa14.64□□□□□ -0.07
TRADD-202ENST00000486556 GTF2H5Q6ZYL4 71 aa14.64□□□□□ -0.07
TRADD-202ENST00000486556 GAGE12HA6NDE8 117 aa14.63□□□□□ -0.07
TRADD-202ENST00000486556 DNAH10OSP0CZ25 163 aa14.63□□□□□ -0.07
TRADD-202ENST00000486556 MEIG1Q5JSS6 88 aa14.63□□□□□ -0.07
TRADD-202ENST00000486556 K7ERJ3 54 aa14.62□□□□□ -0.07
TRADD-202ENST00000486556 LINC00588Q9Y4M8 146 aa14.62□□□□□ -0.07
TRADD-202ENST00000486556 APOMO95445 188 aa14.62□□□□□ -0.07
TRADD-202ENST00000486556 COPS9Q8WXC6 57 aa14.62□□□□□ -0.07
TRADD-202ENST00000486556 A0A1W2PPM0 123 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 201.5 ms