RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 COL5A3P25940 1745 aaPredicted RBP1.67□□□□□ -2.14
FN1-222ENST00000485567 KNDC1Q76NI1 1749 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.67□□□□□ -2.14
FN1-222ENST00000485567 D6R8Y8 96 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 FXYD1O00168 92 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 GCHFRP30047 84 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 Q6JHZ5 121 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 BAGE2Q86Y30 109 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 MUSTN1Q8IVN3 82 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 Q96NJ1 140 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 RREB1Q92766 1687 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 SCN11AQ9UI33 1791 aa1.67□□□□□ -2.14
FN1-222ENST00000485567 FREM1Q5H8C1 2179 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 MED12Q93074 2177 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 TRGV2A0A075B6R0 118 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 CTXND1A0A1B0GTU2 59 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 COX8AP10176 69 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 PCOTHQ58A44 107 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 UBE2D4Q9Y2X8 147 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 SNURFQ9Y675 71 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 KDM3BQ7LBC6 1761 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 FN1P02751 2386 aaKnown RBP1.66□□□□□ -2.14
FN1-222ENST00000485567 ASXL1Q8IXJ9 1541 aa1.66□□□□□ -2.14
FN1-222ENST00000485567 ALPK2Q86TB3 2170 aa1.65□□□□□ -2.14
FN1-222ENST00000485567 RTTNQ86VV8 2226 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 A0A087WXM4 84 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 TRGV1A0A0A0MS02 117 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 UQCR11O14957 56 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 SPTBP11277 2137 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 S100A3P33764 101 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 PI4KAP42356 2102 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 ZNF137PP52743 207 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 TET1Q8NFU7 2136 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 CACNA1GO43497 2377 aa1.65□□□□□ -2.15
FN1-222ENST00000485567 TARBP1Q13395 1621 aaKnown RBP1.65□□□□□ -2.15
FN1-222ENST00000485567 RGPD2P0DJD1 1756 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 SCN7AQ01118 1682 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 ADGRB2O60241 1585 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 J3QKU1 62 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 HCRTO43612 131 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 KRTAP5-8O75690 187 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 KRTAP12-4P60329 112 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 KRTAP13-4Q3LI77 160 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 BAGE3Q86Y29 109 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 DEFB107AQ8IZN7 70 aa1.64□□□□□ -2.15
FN1-222ENST00000485567 ARFGEF1Q9Y6D6 1849 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 ZMYM4Q5VZL5 1548 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 TRAV1-2A0A0B4J238 106 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 C3orf79P0CE67 100 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 KRTAP12-1P59990 96 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 GDF5OSQ5U4N7 250 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 OBSCN-AS1Q96MR7 158 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 SPRR4Q96PI1 79 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 CCL19Q99731 98 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 PLAC8Q9NZF1 115 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 C1orf167Q5SNV9 1468 aa1.63□□□□□ -2.15
FN1-222ENST00000485567 PREX2Q70Z35 1606 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 SDK1Q7Z5N4 2213 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 H3BVH4 76 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 MGPP08493 103 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 IFI27P40305 119 aaPredicted RBP1.62□□□□□ -2.15
FN1-222ENST00000485567 SPINK7P58062 85 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 LINC00472Q9H8W2 130 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 PHRF1Q9P1Y6 1649 aaKnown RBP1.62□□□□□ -2.15
FN1-222ENST00000485567 ARFGEF2Q9Y6D5 1785 aa1.62□□□□□ -2.15
FN1-222ENST00000485567 AFDNP55196 1824 aaKnown RBP1.61□□□□□ -2.15
FN1-222ENST00000485567 TRBV7-4A0A0J9YYF1 115 aa1.61□□□□□ -2.15
FN1-222ENST00000485567 RGPD8O14715 1765 aaPredicted RBP1.61□□□□□ -2.15
FN1-222ENST00000485567 RGPD5Q99666 1765 aa1.61□□□□□ -2.15
FN1-222ENST00000485567 ITSN1Q15811 1721 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 CEP170BQ9Y4F5 1589 aaPredicted RBP1.6□□□□□ -2.15
FN1-222ENST00000485567 PCDH15Q96QU1 1955 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 FXYD6-FXYD2A0A087WZ82 144 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 CAV3P56539 151 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 ATP5EP2Q5VTU8 51 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 Q6ZQY7 126 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 LINC00846Q9NV44 126 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 BTAF1O14981 1849 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 LAMA4Q16363 1823 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 PRXQ9BXM0 1461 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 CD163L1Q9NR16 1453 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 GBF1Q92538 1859 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 MDC1Q14676 2089 aaKnown RBP1.6□□□□□ -2.15
FN1-222ENST00000485567 ICE1Q9Y2F5 2266 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 RGPD1P0DJD0 1748 aa1.6□□□□□ -2.15
FN1-222ENST00000485567 ZNF236Q9UL36 1845 aa1.59□□□□□ -2.15
FN1-222ENST00000485567 ACYP2P14621 99 aa1.59□□□□□ -2.15
FN1-222ENST00000485567 MYO7BQ6PIF6 2116 aa1.59□□□□□ -2.15
FN1-222ENST00000485567 GNG13Q9P2W3 67 aa1.59□□□□□ -2.15
FN1-222ENST00000485567 TRIOBPQ9H2D6 2365 aa1.59□□□□□ -2.16
FN1-222ENST00000485567 CDC42BPGQ6DT37 1551 aa1.59□□□□□ -2.16
FN1-222ENST00000485567 TNRC6BQ9UPQ9 1833 aaKnown RBP1.59□□□□□ -2.16
FN1-222ENST00000485567 RAPGEF6Q8TEU7 1601 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 PDCD11Q14690 1871 aaKnown RBP1.58□□□□□ -2.16
FN1-222ENST00000485567 IFI6P09912 130 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 HMGA1P17096 107 aaKnown RBP1.58□□□□□ -2.16
FN1-222ENST00000485567 SPATA8Q6RVD6 105 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 SMIM5Q71RC9 77 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 PLXNC1O60486 1568 aa1.58□□□□□ -2.16
FN1-222ENST00000485567 BAHCC1Q9P281 2608 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms